Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446840
Identifier: 126446840
GI number: 126446840
Start: 1165104
End: 1166870
Strand: Direct
Name: 126446840
Synonym: BMA10247_A1199
Alternate gene names: NA
Gene position: 1165104-1166870 (Clockwise)
Preceding gene: 126445598
Following gene: 126446076
Centisome position: 49.52
GC content: 71.02
Gene sequence:
>1767_bases ATGACGCGCTACGACACGATCATCCGCAACGGCCTATGGTTCGACGGCACGCTCGCCGAGCCCCGCCCGCGCGAGCTCGG CATTCGCGACGGGCGCGTCGCGGCGGTATCGGACACGCCGCTCGCCGCGGACGGCGCGAGCGTGATCGACGCGACCGGCA AATGGGTGATGCCCGGCTTCATCGACATCCACACGCATTACGACGCCGAGATTCTCGTGTCGCCGGGGCTGCCCGAATCG GTGCGGCACGGCGTGACGAGCGTCTTCCTCGGCTCGTGCTCGCTGTCGACCGTCCACGCGAACGCGCTCGACTGCACCGA TCTCTTCAGCCGCGTCGAAGCGCTGCCGCGCGAGCAGATGCTCGCCGTGCTGTCGCGCGTGAAGACCTGGGACACGGCGG CTGCGTACGTGCGCCATCTCGAATCGCTGCCGCTCGGCCCGAACGTCGCGGCGTTCCTCGGCCATTCGGACCTGCGCACG CACGTGCTCGGCCTCGGGCGCGCGGTGGACGACCGCGTGCGGCCGCACGAGGCCGAGCTGCAACGGATGGAGCGGCTGCT CGACGACGCGCTCGACGCGGGCTTCGTCGGCCTGTCGTCGATGACGACGCCGTGGGACAAGCTCGACGGCGAGCGCTACC GGTCGAAGTCGCTGCCGTCGACGTTCGCGACGTGGCGCGAGTACCGGCGGCTGAACCGCGTGCTGCGCCGCCGCGGGCGC GTGCTGCAAAGCGCGCCGAACACGACCAATCCGCTGAACGGCCTGCTCTTCATGGCCGAGAGTTGCGGCTACTTCGTGCG CAAGCCGCTGCGCACGTCGCTGCTCGTCGCGGCCGACAGCAAGGCGGCGCCGCGCGGCACCATCGACGTGCAGCTCGGCG GCGTGCGCGTCGCGAACGCGCTGTTTCGCGGCGAGCTCGTCTGGCAGCATCTGCCGGTGCCGTTCGAAGTCTATGCGGAC GGCATCGATTTCGTGATCTTCGAGGAGTTCGGCGCGGGCCGCGCGGCGCTGCATCTGGCCGACGCGCTCGAGCGCAACAA GCTGCTGCAGAACGAAGGCTACCGGCGCGAGTTCCGCCGGCAGGTCGGCAAGGGGTTCGACCTGCGGCTCTGGACGCGCG ATCTGCACGACACGCGGATCGTCGGCTGTCCGGATGCGTCGGTCGTCGGCAAATCGTTCGGCCAGGTCGCGAACGAGCGC GGCGTCCACCCGGCGGACGCGTTTCTCGATCTCGTCGTCGCGCACGGGCAGCGGCTGCGCTGGTGCATGACGATCGCGAA CCACCGCGCGGATGTGCTCGACCGCATCGCGCCCCATCCGGCGCTGCAGATCGGCTTCGCCGATTCGGGCGCGCACCTGC GCAACATGGCGTTCTACAACGCGCCCGTGCGCTTCCTGCGCCGCGTGCGCGAGGCCGAGCGCGCCGGCCGGCCGTTCATG TCGGTGCAGCAGGCGGTGCATCGGCTGACGGGCGAGCTCGGCGCGTATTTCGGCGTCGACGCCGGCACGCTGCGCGCCGG CGACCGCGCCGATATCGCGATCGTCGATCCCGCGCATCTCGACGCGTCGGTCGACGCGTCGGTCGACGCGTATCACGAAG AGGACATGGCCGTGTTCGGCGGGCTGCGGCGGCTCGTGAACCGCAGCGGCGCGGCGATCGCGGCGACGCTCGTCAACGGG CAACTCGTGTATCGCGACGGCGCGTTCGCCGAAGGCTTCGGCGACACGCGGCGCTCGGGGCGGTTCCTGCGCGCGGCGGC GCGCTAG
Upstream 100 bases:
>100_bases GGGGCACGCCGGCCGATGCGTCGCGGCTCGCCGCCGCCCGGCCGTCGACGGAAACCGCGTGCAAAACTCAGAACGCACAA CGATACGGAGACACCTCACG
Downstream 100 bases:
>100_bases GGCCGGCACGCGCTCGGCACGCGCTCGGCGCCGGCCGGCGTAGCGGCCGCGCGCGACGCACGCGCCGCCGCGGATACCGA ACGCGTTCGGCTCGGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 588; Mature: 587
Protein sequence:
>588_residues MTRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGFIDIHTHYDAEILVSPGLPES VRHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQMLAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRT HVLGLGRAVDDRVRPHEAELQRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGR VLQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANALFRGELVWQHLPVPFEVYAD GIDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRRQVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANER GVHPADAFLDLVVAHGQRLRWCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFM SVQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFGGLRRLVNRSGAAIAATLVNG QLVYRDGAFAEGFGDTRRSGRFLRAAAR
Sequences:
>Translated_588_residues MTRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGFIDIHTHYDAEILVSPGLPES VRHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQMLAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRT HVLGLGRAVDDRVRPHEAELQRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGR VLQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANALFRGELVWQHLPVPFEVYAD GIDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRRQVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANER GVHPADAFLDLVVAHGQRLRWCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFM SVQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFGGLRRLVNRSGAAIAATLVNG QLVYRDGAFAEGFGDTRRSGRFLRAAAR >Mature_587_residues TRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGFIDIHTHYDAEILVSPGLPESV RHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQMLAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRTH VLGLGRAVDDRVRPHEAELQRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGRV LQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANALFRGELVWQHLPVPFEVYADG IDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRRQVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANERG VHPADAFLDLVVAHGQRLRWCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFMS VQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFGGLRRLVNRSGAAIAATLVNGQ LVYRDGAFAEGFGDTRRSGRFLRAAAR
Specific function: Unknown
COG id: COG3653
COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 64868; Mature: 64736
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGF CCCHHHHHHCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCHHHCCCCCEECCCE IDIHTHYDAEILVSPGLPESVRHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQM EEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHH LAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRTHVLGLGRAVDDRVRPHEAEL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCHHHHHCCCCCHHHH QRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGR HHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH VLQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANA HHHCCCCCCCCCHHHHHHHHHCCHHHHCCHHHEEEEEECCCCCCCCEEEEEECCCHHHHH LFRGELVWQHLPVPFEVYADGIDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRR HHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH QVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANERGVHPADAFLDLVVAHGQRLR HHCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH WCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFM HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SVQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHH GLRRLVNRSGAAIAATLVNGQLVYRDGAFAEGFGDTRRSGRFLRAAAR HHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCCCHHHCCCHHHHCCC >Mature Secondary Structure TRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGF CCHHHHHHCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCHHHCCCCCEECCCE IDIHTHYDAEILVSPGLPESVRHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQM EEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHH LAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRTHVLGLGRAVDDRVRPHEAEL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCHHHHHCCCCCHHHH QRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGR HHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH VLQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANA HHHCCCCCCCCCHHHHHHHHHCCHHHHCCHHHEEEEEECCCCCCCCEEEEEECCCHHHHH LFRGELVWQHLPVPFEVYADGIDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRR HHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH QVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANERGVHPADAFLDLVVAHGQRLR HHCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH WCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFM HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SVQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHH GLRRLVNRSGAAIAATLVNGQLVYRDGAFAEGFGDTRRSGRFLRAAAR HHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCCCHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]