Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is 126446840

Identifier: 126446840

GI number: 126446840

Start: 1165104

End: 1166870

Strand: Direct

Name: 126446840

Synonym: BMA10247_A1199

Alternate gene names: NA

Gene position: 1165104-1166870 (Clockwise)

Preceding gene: 126445598

Following gene: 126446076

Centisome position: 49.52

GC content: 71.02

Gene sequence:

>1767_bases
ATGACGCGCTACGACACGATCATCCGCAACGGCCTATGGTTCGACGGCACGCTCGCCGAGCCCCGCCCGCGCGAGCTCGG
CATTCGCGACGGGCGCGTCGCGGCGGTATCGGACACGCCGCTCGCCGCGGACGGCGCGAGCGTGATCGACGCGACCGGCA
AATGGGTGATGCCCGGCTTCATCGACATCCACACGCATTACGACGCCGAGATTCTCGTGTCGCCGGGGCTGCCCGAATCG
GTGCGGCACGGCGTGACGAGCGTCTTCCTCGGCTCGTGCTCGCTGTCGACCGTCCACGCGAACGCGCTCGACTGCACCGA
TCTCTTCAGCCGCGTCGAAGCGCTGCCGCGCGAGCAGATGCTCGCCGTGCTGTCGCGCGTGAAGACCTGGGACACGGCGG
CTGCGTACGTGCGCCATCTCGAATCGCTGCCGCTCGGCCCGAACGTCGCGGCGTTCCTCGGCCATTCGGACCTGCGCACG
CACGTGCTCGGCCTCGGGCGCGCGGTGGACGACCGCGTGCGGCCGCACGAGGCCGAGCTGCAACGGATGGAGCGGCTGCT
CGACGACGCGCTCGACGCGGGCTTCGTCGGCCTGTCGTCGATGACGACGCCGTGGGACAAGCTCGACGGCGAGCGCTACC
GGTCGAAGTCGCTGCCGTCGACGTTCGCGACGTGGCGCGAGTACCGGCGGCTGAACCGCGTGCTGCGCCGCCGCGGGCGC
GTGCTGCAAAGCGCGCCGAACACGACCAATCCGCTGAACGGCCTGCTCTTCATGGCCGAGAGTTGCGGCTACTTCGTGCG
CAAGCCGCTGCGCACGTCGCTGCTCGTCGCGGCCGACAGCAAGGCGGCGCCGCGCGGCACCATCGACGTGCAGCTCGGCG
GCGTGCGCGTCGCGAACGCGCTGTTTCGCGGCGAGCTCGTCTGGCAGCATCTGCCGGTGCCGTTCGAAGTCTATGCGGAC
GGCATCGATTTCGTGATCTTCGAGGAGTTCGGCGCGGGCCGCGCGGCGCTGCATCTGGCCGACGCGCTCGAGCGCAACAA
GCTGCTGCAGAACGAAGGCTACCGGCGCGAGTTCCGCCGGCAGGTCGGCAAGGGGTTCGACCTGCGGCTCTGGACGCGCG
ATCTGCACGACACGCGGATCGTCGGCTGTCCGGATGCGTCGGTCGTCGGCAAATCGTTCGGCCAGGTCGCGAACGAGCGC
GGCGTCCACCCGGCGGACGCGTTTCTCGATCTCGTCGTCGCGCACGGGCAGCGGCTGCGCTGGTGCATGACGATCGCGAA
CCACCGCGCGGATGTGCTCGACCGCATCGCGCCCCATCCGGCGCTGCAGATCGGCTTCGCCGATTCGGGCGCGCACCTGC
GCAACATGGCGTTCTACAACGCGCCCGTGCGCTTCCTGCGCCGCGTGCGCGAGGCCGAGCGCGCCGGCCGGCCGTTCATG
TCGGTGCAGCAGGCGGTGCATCGGCTGACGGGCGAGCTCGGCGCGTATTTCGGCGTCGACGCCGGCACGCTGCGCGCCGG
CGACCGCGCCGATATCGCGATCGTCGATCCCGCGCATCTCGACGCGTCGGTCGACGCGTCGGTCGACGCGTATCACGAAG
AGGACATGGCCGTGTTCGGCGGGCTGCGGCGGCTCGTGAACCGCAGCGGCGCGGCGATCGCGGCGACGCTCGTCAACGGG
CAACTCGTGTATCGCGACGGCGCGTTCGCCGAAGGCTTCGGCGACACGCGGCGCTCGGGGCGGTTCCTGCGCGCGGCGGC
GCGCTAG

Upstream 100 bases:

>100_bases
GGGGCACGCCGGCCGATGCGTCGCGGCTCGCCGCCGCCCGGCCGTCGACGGAAACCGCGTGCAAAACTCAGAACGCACAA
CGATACGGAGACACCTCACG

Downstream 100 bases:

>100_bases
GGCCGGCACGCGCTCGGCACGCGCTCGGCGCCGGCCGGCGTAGCGGCCGCGCGCGACGCACGCGCCGCCGCGGATACCGA
ACGCGTTCGGCTCGGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MTRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGFIDIHTHYDAEILVSPGLPES
VRHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQMLAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRT
HVLGLGRAVDDRVRPHEAELQRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGR
VLQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANALFRGELVWQHLPVPFEVYAD
GIDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRRQVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANER
GVHPADAFLDLVVAHGQRLRWCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFM
SVQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFGGLRRLVNRSGAAIAATLVNG
QLVYRDGAFAEGFGDTRRSGRFLRAAAR

Sequences:

>Translated_588_residues
MTRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGFIDIHTHYDAEILVSPGLPES
VRHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQMLAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRT
HVLGLGRAVDDRVRPHEAELQRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGR
VLQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANALFRGELVWQHLPVPFEVYAD
GIDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRRQVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANER
GVHPADAFLDLVVAHGQRLRWCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFM
SVQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFGGLRRLVNRSGAAIAATLVNG
QLVYRDGAFAEGFGDTRRSGRFLRAAAR
>Mature_587_residues
TRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGFIDIHTHYDAEILVSPGLPESV
RHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQMLAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRTH
VLGLGRAVDDRVRPHEAELQRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGRV
LQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANALFRGELVWQHLPVPFEVYADG
IDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRRQVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANERG
VHPADAFLDLVVAHGQRLRWCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFMS
VQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFGGLRRLVNRSGAAIAATLVNGQ
LVYRDGAFAEGFGDTRRSGRFLRAAAR

Specific function: Unknown

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 64868; Mature: 64736

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGF
CCCHHHHHHCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCHHHCCCCCEECCCE
IDIHTHYDAEILVSPGLPESVRHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQM
EEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHH
LAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRTHVLGLGRAVDDRVRPHEAEL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCHHHHHCCCCCHHHH
QRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGR
HHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH
VLQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANA
HHHCCCCCCCCCHHHHHHHHHCCHHHHCCHHHEEEEEECCCCCCCCEEEEEECCCHHHHH
LFRGELVWQHLPVPFEVYADGIDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRR
HHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
QVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANERGVHPADAFLDLVVAHGQRLR
HHCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
WCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFM
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SVQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHH
GLRRLVNRSGAAIAATLVNGQLVYRDGAFAEGFGDTRRSGRFLRAAAR
HHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCCCHHHCCCHHHHCCC
>Mature Secondary Structure 
TRYDTIIRNGLWFDGTLAEPRPRELGIRDGRVAAVSDTPLAADGASVIDATGKWVMPGF
CCHHHHHHCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCHHHCCCCCEECCCE
IDIHTHYDAEILVSPGLPESVRHGVTSVFLGSCSLSTVHANALDCTDLFSRVEALPREQM
EEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHH
LAVLSRVKTWDTAAAYVRHLESLPLGPNVAAFLGHSDLRTHVLGLGRAVDDRVRPHEAEL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCHHHHHCCCCCHHHH
QRMERLLDDALDAGFVGLSSMTTPWDKLDGERYRSKSLPSTFATWREYRRLNRVLRRRGR
HHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH
VLQSAPNTTNPLNGLLFMAESCGYFVRKPLRTSLLVAADSKAAPRGTIDVQLGGVRVANA
HHHCCCCCCCCCHHHHHHHHHCCHHHHCCHHHEEEEEECCCCCCCCEEEEEECCCHHHHH
LFRGELVWQHLPVPFEVYADGIDFVIFEEFGAGRAALHLADALERNKLLQNEGYRREFRR
HHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
QVGKGFDLRLWTRDLHDTRIVGCPDASVVGKSFGQVANERGVHPADAFLDLVVAHGQRLR
HHCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
WCMTIANHRADVLDRIAPHPALQIGFADSGAHLRNMAFYNAPVRFLRRVREAERAGRPFM
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SVQQAVHRLTGELGAYFGVDAGTLRAGDRADIAIVDPAHLDASVDASVDAYHEEDMAVFG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHH
GLRRLVNRSGAAIAATLVNGQLVYRDGAFAEGFGDTRRSGRFLRAAAR
HHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCCCHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]