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The map label for this gene is soxB [H]

Identifier: 126446782

GI number: 126446782

Start: 965675

End: 967003

Strand: Direct

Name: soxB [H]

Synonym: BMA10247_A1023

Alternate gene names: 126446782

Gene position: 965675-967003 (Clockwise)

Preceding gene: 126446860

Following gene: 126446791

Centisome position: 41.05

GC content: 71.93

Gene sequence:

>1329_bases
ATGACCACGACCTATCCGCTTTACAAGACGCTCGCGCGCGCCGACGAACCGTTTCCCGCGCAAGCCGACGTCGTCATCGC
CGGCGCGGGCATCATGGGGTGCGCCGCCGCCTATTATCTCGGGTTGCGCGGAATAAAGGCGGCTGTCTTCGACAAATCCC
GCATAGCGGGACAGCAGTCGACGCGCGCATGGGGTTTCGTGCGCCAACAGGGCCGCGAAGCCGCCGAAGTGCCGCTGATG
ATGGCCGGCATGCGCCTGTGGGAGGGGCTCGAGCGCGAACTCGGCGCCGATCTCGAATGGCGGCAGGGCGGCTGCCTCTA
CCTGGCCGACAACGACGACGACTGGGCGTCGTTCCGGCAATGGACGGATGTCGCGCGCGCGCACGGGCTCGATACGCGTA
CGCTCGCGCGCGCCGAGATCGACGCGCACGTGAGCGGCCTTGCCGCGCCCGCGCTCGGCGGCCTCTATACGGCGAGCGAC
GGCCAGGCCGAGCCGCGCCGCGTCGCCGCGGCGTTCGCCGCACGCGCGATCGAAGCCGGCGCGCGTTTCTTCGAAGGCTG
CGGCGTGACCGCGATCGATACGTCGGGCGGCGCGGTCGCGGGCGTCGTCACCGAGCGCGGCGTCGTGAAGGCGCGGCGCG
TGATCTGCGCGGCCGGGGCGACCAGCTTTCGTCTGCTGGATGGCGTCGGCATCCGGCTGCCGCAGCAGGCGGTGCGCGGC
ACCTGCATGCGCACGAACCCGCTGCCCGCCGTGTCCGCGTCGACCATCTGGGGGCATGGCCTCGGCATCCGGCAGCGCGC
GAACGGCGCGATCAACCTCGCGGACGACATGCAGGTGGATGTCGACGTCACGCTCGGCCATCTGCGCGGGCTGAGCCTGT
TCCTGCCCGAGCTGTGGGCGCGGCGCGAGAAGTTCCGCTTTCATCTGAACGGCGCGGCATGGCGCGATCTGAAGGCGCGC
GCCGCGGGCGGCGCAGCGGTGCTCGAACCGCGCGATCCGAACCCGCAGCCGAATCCCGCCCATGCGCCGCGCGCGCTCGC
GAAGCTGAAGGCGGTCTTCCCGGCGCTGCGCGACGCGCGGATCGTCGAGGCGTGGGCGGGCCTGATCGATGTGCTGCCCG
ACGGCATTCCGGTGATCGACGCGCCGCGCGCGCCCGACGGGCTCGCGATCGCGACCGGATTCTGTGGTCACGGCTTCGCG
ATGGGGCCGATCGTCGGCAGCCTGCTCGCCGAGTGGGTCGACACGGGCGCGACGTCGCTCGACCTGTCCGCGTTTCGCGC
GGCGCGCTTCGTCGACGGGACGATGCGGCGGCCGGCGAGCATGCTGTAG

Upstream 100 bases:

>100_bases
AGTTCGTCCTGCGCACTAGTGTGCGTTTTTCTGTGAAAGGTGTTTCCTCAAGTTACTGTGACGGGTTTTCGCCGATGGCG
TTTTCGCCGAAACTTCCGAC

Downstream 100 bases:

>100_bases
CACCGATGGCCGTGGCGGCGACGGTGGCGGTAGCGGCGGTAGTAGCGGGGCGGGGGCCGGCGTGGCCGGCGACGCGGCGG
GCGGCGAGCGTCGTTCACAT

Product: FAD-dependent oxidoreductase

Products: NA

Alternate protein names: Sarcosine oxidase subunit B [H]

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MTTTYPLYKTLARADEPFPAQADVVIAGAGIMGCAAAYYLGLRGIKAAVFDKSRIAGQQSTRAWGFVRQQGREAAEVPLM
MAGMRLWEGLERELGADLEWRQGGCLYLADNDDDWASFRQWTDVARAHGLDTRTLARAEIDAHVSGLAAPALGGLYTASD
GQAEPRRVAAAFAARAIEAGARFFEGCGVTAIDTSGGAVAGVVTERGVVKARRVICAAGATSFRLLDGVGIRLPQQAVRG
TCMRTNPLPAVSASTIWGHGLGIRQRANGAINLADDMQVDVDVTLGHLRGLSLFLPELWARREKFRFHLNGAAWRDLKAR
AAGGAAVLEPRDPNPQPNPAHAPRALAKLKAVFPALRDARIVEAWAGLIDVLPDGIPVIDAPRAPDGLAIATGFCGHGFA
MGPIVGSLLAEWVDTGATSLDLSAFRAARFVDGTMRRPASML

Sequences:

>Translated_442_residues
MTTTYPLYKTLARADEPFPAQADVVIAGAGIMGCAAAYYLGLRGIKAAVFDKSRIAGQQSTRAWGFVRQQGREAAEVPLM
MAGMRLWEGLERELGADLEWRQGGCLYLADNDDDWASFRQWTDVARAHGLDTRTLARAEIDAHVSGLAAPALGGLYTASD
GQAEPRRVAAAFAARAIEAGARFFEGCGVTAIDTSGGAVAGVVTERGVVKARRVICAAGATSFRLLDGVGIRLPQQAVRG
TCMRTNPLPAVSASTIWGHGLGIRQRANGAINLADDMQVDVDVTLGHLRGLSLFLPELWARREKFRFHLNGAAWRDLKAR
AAGGAAVLEPRDPNPQPNPAHAPRALAKLKAVFPALRDARIVEAWAGLIDVLPDGIPVIDAPRAPDGLAIATGFCGHGFA
MGPIVGSLLAEWVDTGATSLDLSAFRAARFVDGTMRRPASML
>Mature_441_residues
TTTYPLYKTLARADEPFPAQADVVIAGAGIMGCAAAYYLGLRGIKAAVFDKSRIAGQQSTRAWGFVRQQGREAAEVPLMM
AGMRLWEGLERELGADLEWRQGGCLYLADNDDDWASFRQWTDVARAHGLDTRTLARAEIDAHVSGLAAPALGGLYTASDG
QAEPRRVAAAFAARAIEAGARFFEGCGVTAIDTSGGAVAGVVTERGVVKARRVICAAGATSFRLLDGVGIRLPQQAVRGT
CMRTNPLPAVSASTIWGHGLGIRQRANGAINLADDMQVDVDVTLGHLRGLSLFLPELWARREKFRFHLNGAAWRDLKARA
AGGAAVLEPRDPNPQPNPAHAPRALAKLKAVFPALRDARIVEAWAGLIDVLPDGIPVIDAPRAPDGLAIATGFCGHGFAM
GPIVGSLLAEWVDTGATSLDLSAFRAARFVDGTMRRPASML

Specific function: Catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10- methylenetetrahydrofolate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the soxB family [H]

Homologues:

Organism=Homo sapiens, GI197927446, Length=437, Percent_Identity=24.0274599542334, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI21361378, Length=437, Percent_Identity=24.0274599542334, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI194306651, Length=420, Percent_Identity=21.9047619047619, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI20130091, Length=420, Percent_Identity=23.3333333333333, Blast_Score=101, Evalue=8e-22,
Organism=Drosophila melanogaster, GI28571104, Length=419, Percent_Identity=24.1050119331742, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR006278 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 46939; Mature: 46808

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTYPLYKTLARADEPFPAQADVVIAGAGIMGCAAAYYLGLRGIKAAVFDKSRIAGQQS
CCCCHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TRAWGFVRQQGREAAEVPLMMAGMRLWEGLERELGADLEWRQGGCLYLADNDDDWASFRQ
HHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCHHHHHH
WTDVARAHGLDTRTLARAEIDAHVSGLAAPALGGLYTASDGQAEPRRVAAAFAARAIEAG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHH
ARFFEGCGVTAIDTSGGAVAGVVTERGVVKARRVICAAGATSFRLLDGVGIRLPQQAVRG
HHHHHCCCCEEEECCCCEEEEEHHHCHHHHHHHHHHCCCCCCEEHHCCCCCCCCHHHHCC
TCMRTNPLPAVSASTIWGHGLGIRQRANGAINLADDMQVDVDVTLGHLRGLSLFLPELWA
CEEECCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCEEEEEEEHHHHCCHHHHHHHHHH
RREKFRFHLNGAAWRDLKARAAGGAAVLEPRDPNPQPNPAHAPRALAKLKAVFPALRDAR
HHHHEEEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IVEAWAGLIDVLPDGIPVIDAPRAPDGLAIATGFCGHGFAMGPIVGSLLAEWVDTGATSL
HHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEE
DLSAFRAARFVDGTMRRPASML
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTTYPLYKTLARADEPFPAQADVVIAGAGIMGCAAAYYLGLRGIKAAVFDKSRIAGQQS
CCCHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TRAWGFVRQQGREAAEVPLMMAGMRLWEGLERELGADLEWRQGGCLYLADNDDDWASFRQ
HHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCHHHHHH
WTDVARAHGLDTRTLARAEIDAHVSGLAAPALGGLYTASDGQAEPRRVAAAFAARAIEAG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHH
ARFFEGCGVTAIDTSGGAVAGVVTERGVVKARRVICAAGATSFRLLDGVGIRLPQQAVRG
HHHHHCCCCEEEECCCCEEEEEHHHCHHHHHHHHHHCCCCCCEEHHCCCCCCCCHHHHCC
TCMRTNPLPAVSASTIWGHGLGIRQRANGAINLADDMQVDVDVTLGHLRGLSLFLPELWA
CEEECCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCEEEEEEEHHHHCCHHHHHHHHHH
RREKFRFHLNGAAWRDLKARAAGGAAVLEPRDPNPQPNPAHAPRALAKLKAVFPALRDAR
HHHHEEEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IVEAWAGLIDVLPDGIPVIDAPRAPDGLAIATGFCGHGFAMGPIVGSLLAEWVDTGATSL
HHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEE
DLSAFRAARFVDGTMRRPASML
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]