Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446775
Identifier: 126446775
GI number: 126446775
Start: 1020135
End: 1021754
Strand: Reverse
Name: 126446775
Synonym: BMA10247_A1078
Alternate gene names: NA
Gene position: 1021754-1020135 (Counterclockwise)
Preceding gene: 126447123
Following gene: 126445744
Centisome position: 43.43
GC content: 71.48
Gene sequence:
>1620_bases ATGTCCGTCCTCGTTCCGCTCGCCGGTTGCGGCGGCGGTGGCGACGGAGGCGGAAGCGGCACGCCGTCGGCCGCCGCGCA GCCGACCCCCGCGCCGGCACCGGCGCCGGCCCCGGCACCCGCGCCGAGCTCGGGTTCGTCGCAATCCACCAATTCGTCGA CCTCGACGGCGGCCTGCCCCGTCACGCAGGCCGCCTCGACCGCCGCCGGCGAAACGCTCGTCACCCGCACCGTTTCGCAC GAAGCACCCGTCGACCATCTGATCGTCAAGCTGCAACGCACGGCGGCGGCGAGCGCATCCGGCGCGCGCATCATGGCCGC GGCGAACGACGCGGCCCGACTCGATTCGGTGATCCAGCGCGTGATGTCGCAATGGAGCGCGAAGAGCGGCGCCGTTCGCT CGTATGCGCAGAACATCGCGCCGACGAACGCGGTGCAGGTGGAACGGACGATGTCGGACGGTGCCGCGCTGCTCGCGCTC GGACAAAAGATGAGCGCGGATAATGCCGGCGCTCTCGCGCAAACGTTCGCGGCCGATCCGGACGTCGCCTATGCGGAGCC CGACCGGCGCGTGTTCGCCCGCACGGTGGCGACCGACCCGGACTACGCGCAGCAGTGGAACTACTTCGATCCGGCGGCCG GCATCAATCTGCCGGACGCATGGAACGTGACGAACGGCCTGCCGAGCGTCGTCACCGCGGTGCTCGACACCGGCTATCGC CCGCATCCGGACATCATCGCGAACCTGCTGCCGGGCTACGATTTCATCTCCGACATCAACACCGGCAACAACGGCCACGG CCGCGGCCCGGACGCGACCGACCCGGGCGACTGGGTCACGCAGCAGGAACTGACCGATCCGTCGAGCCCGTTCTACCAAT GCGCGAGCGCGCCGTCGAACAGCAGCTGGCACGGCACGCAGGTCGCCGGCATCATCGGCGCCGCCGCGAACAACGGCATC GGCATCGCGGGCGTCAGCTGGTACGGCAAGATCCTGCCCGTGCGCGTGCTCGGCAAGTGCGGCGGCACGACGAGCGACAT CGCCGACGCGATGCGCTGGGCGGCGGGCATTCCCGTCGCGGGCGCGCCGACGAACCTCACGCCGGCGAAGGTGATCAACC TGAGCCTCGGCGGCAGCGGCCCGTGCGGCGACACGTTCCAGCAGGCGATCAACGACGTGATCGCGCGCGGCACGACCGTC GTCGTCTCGGCCGGCAACGACGGCCAGGCGACGACGCTGGACCGCCCGGCCAACTGCAAGGGCGTGATCTCGGTCGGCGC GACCGACAGCACCGGCCAGCGCGCGTGGTACAGCAACTTCGGCTCGGACATCACGCTGAGCGCGCCGGGCTCGAACATCC TGTCGACGAGCAATGCGGGCACCACGGTGCCGACCACCGACGCGTACGGCACGCACAGCGGCACGAGCCTCGCCGCGCCG CAGGTGGCGGGCGTCGCCTCGCTGATGCTCGCGGTCAACCCGAACCTCACGCCCGCGCAGATCGCGCAGAAGCTCGCGAG CACCGCGCGGCCGTCGCCGGCCACCGCATCCTGCCTCGCGCGCGCGCCGGGCGCGGGCATCGTCGACGCCGGCACGGTGG TTGCGTCCGCAACGAAATAG
Upstream 100 bases:
>100_bases GTATCGAACCCAAGAGTGGAGAGGCCCCATGAACAAGAAATGTAGTAATCCTGAACAGACGCGGCTTGGCCAGGTCCGTG CCGTCGCCGGCATTCTCTCC
Downstream 100 bases:
>100_bases CGTCGCGTCCCGAACGCGCTCTTGCGGCGGCCGCCCGAACGGGCGGCCGTCTTTCTTCGGTTCGCGGCCGCGCCGGCGGC AATGCGCCACCTCGCGCGCA
Product: serine metalloprotease MrpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MSVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAPAPAPAPSSGSSQSTNSSTSTAACPVTQAASTAAGETLVTRTVSH EAPVDHLIVKLQRTAAASASGARIMAAANDAARLDSVIQRVMSQWSAKSGAVRSYAQNIAPTNAVQVERTMSDGAALLAL GQKMSADNAGALAQTFAADPDVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGINLPDAWNVTNGLPSVVTAVLDTGYR PHPDIIANLLPGYDFISDINTGNNGHGRGPDATDPGDWVTQQELTDPSSPFYQCASAPSNSSWHGTQVAGIIGAAANNGI GIAGVSWYGKILPVRVLGKCGGTTSDIADAMRWAAGIPVAGAPTNLTPAKVINLSLGGSGPCGDTFQQAINDVIARGTTV VVSAGNDGQATTLDRPANCKGVISVGATDSTGQRAWYSNFGSDITLSAPGSNILSTSNAGTTVPTTDAYGTHSGTSLAAP QVAGVASLMLAVNPNLTPAQIAQKLASTARPSPATASCLARAPGAGIVDAGTVVASATK
Sequences:
>Translated_539_residues MSVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAPAPAPAPSSGSSQSTNSSTSTAACPVTQAASTAAGETLVTRTVSH EAPVDHLIVKLQRTAAASASGARIMAAANDAARLDSVIQRVMSQWSAKSGAVRSYAQNIAPTNAVQVERTMSDGAALLAL GQKMSADNAGALAQTFAADPDVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGINLPDAWNVTNGLPSVVTAVLDTGYR PHPDIIANLLPGYDFISDINTGNNGHGRGPDATDPGDWVTQQELTDPSSPFYQCASAPSNSSWHGTQVAGIIGAAANNGI GIAGVSWYGKILPVRVLGKCGGTTSDIADAMRWAAGIPVAGAPTNLTPAKVINLSLGGSGPCGDTFQQAINDVIARGTTV VVSAGNDGQATTLDRPANCKGVISVGATDSTGQRAWYSNFGSDITLSAPGSNILSTSNAGTTVPTTDAYGTHSGTSLAAP QVAGVASLMLAVNPNLTPAQIAQKLASTARPSPATASCLARAPGAGIVDAGTVVASATK >Mature_538_residues SVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAPAPAPAPSSGSSQSTNSSTSTAACPVTQAASTAAGETLVTRTVSHE APVDHLIVKLQRTAAASASGARIMAAANDAARLDSVIQRVMSQWSAKSGAVRSYAQNIAPTNAVQVERTMSDGAALLALG QKMSADNAGALAQTFAADPDVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGINLPDAWNVTNGLPSVVTAVLDTGYRP HPDIIANLLPGYDFISDINTGNNGHGRGPDATDPGDWVTQQELTDPSSPFYQCASAPSNSSWHGTQVAGIIGAAANNGIG IAGVSWYGKILPVRVLGKCGGTTSDIADAMRWAAGIPVAGAPTNLTPAKVINLSLGGSGPCGDTFQQAINDVIARGTTVV VSAGNDGQATTLDRPANCKGVISVGATDSTGQRAWYSNFGSDITLSAPGSNILSTSNAGTTVPTTDAYGTHSGTSLAAPQ VAGVASLMLAVNPNLTPAQIAQKLASTARPSPATASCLARAPGAGIVDAGTVVASATK
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4505577, Length=421, Percent_Identity=28.2660332541568, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI20336180, Length=420, Percent_Identity=27.8571428571429, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI20336182, Length=412, Percent_Identity=27.4271844660194, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI20336184, Length=412, Percent_Identity=27.4271844660194, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI27894285, Length=423, Percent_Identity=27.6595744680851, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI20336190, Length=423, Percent_Identity=27.6595744680851, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI20336188, Length=422, Percent_Identity=27.2511848341232, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI299523015, Length=389, Percent_Identity=26.2210796915167, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI20336186, Length=391, Percent_Identity=27.3657289002558, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI20336246, Length=389, Percent_Identity=26.2210796915167, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71983555, Length=362, Percent_Identity=26.5193370165746, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25141268, Length=362, Percent_Identity=26.2430939226519, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320775, Length=218, Percent_Identity=33.9449541284404, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324576, Length=194, Percent_Identity=33.5051546391753, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI281360987, Length=402, Percent_Identity=25.3731343283582, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642494, Length=402, Percent_Identity=25.3731343283582, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642490, Length=402, Percent_Identity=25.3731343283582, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI45555723, Length=402, Percent_Identity=25.3731343283582, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642492, Length=402, Percent_Identity=25.3731343283582, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642488, Length=404, Percent_Identity=25, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642484, Length=404, Percent_Identity=25, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642486, Length=404, Percent_Identity=25, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 53852; Mature: 53721
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAPAPAPAPSSGSSQSTNSSTSTAACP CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTQAASTAAGETLVTRTVSHEAPVDHLIVKLQRTAAASASGARIMAAANDAARLDSVIQR CHHHHHHHCCCHHHEEHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH VMSQWSAKSGAVRSYAQNIAPTNAVQVERTMSDGAALLALGQKMSADNAGALAQTFAADP HHHHHCCCCCHHHHHHHHCCCCCCEEEEHHHCCCCEEEHHCCCCCCCCCCHHHHHHCCCC DVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGINLPDAWNVTNGLPSVVTAVLDTGYR CCEECCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC PHPDIIANLLPGYDFISDINTGNNGHGRGPDATDPGDWVTQQELTDPSSPFYQCASAPSN CCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCC SSWHGTQVAGIIGAAANNGIGIAGVSWYGKILPVRVLGKCGGTTSDIADAMRWAAGIPVA CCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC GAPTNLTPAKVINLSLGGSGPCGDTFQQAINDVIARGTTVVVSAGNDGQATTLDRPANCK CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCCCCC GVISVGATDSTGQRAWYSNFGSDITLSAPGSNILSTSNAGTTVPTTDAYGTHSGTSLAAP EEEEECCCCCCCCHHHHHCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC QVAGVASLMLAVNPNLTPAQIAQKLASTARPSPATASCLARAPGAGIVDAGTVVASATK HHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEECCCEEEECCC >Mature Secondary Structure SVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAPAPAPAPSSGSSQSTNSSTSTAACP CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTQAASTAAGETLVTRTVSHEAPVDHLIVKLQRTAAASASGARIMAAANDAARLDSVIQR CHHHHHHHCCCHHHEEHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH VMSQWSAKSGAVRSYAQNIAPTNAVQVERTMSDGAALLALGQKMSADNAGALAQTFAADP HHHHHCCCCCHHHHHHHHCCCCCCEEEEHHHCCCCEEEHHCCCCCCCCCCHHHHHHCCCC DVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGINLPDAWNVTNGLPSVVTAVLDTGYR CCEECCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC PHPDIIANLLPGYDFISDINTGNNGHGRGPDATDPGDWVTQQELTDPSSPFYQCASAPSN CCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCC SSWHGTQVAGIIGAAANNGIGIAGVSWYGKILPVRVLGKCGGTTSDIADAMRWAAGIPVA CCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC GAPTNLTPAKVINLSLGGSGPCGDTFQQAINDVIARGTTVVVSAGNDGQATTLDRPANCK CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCCCCC GVISVGATDSTGQRAWYSNFGSDITLSAPGSNILSTSNAGTTVPTTDAYGTHSGTSLAAP EEEEECCCCCCCCHHHHHCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC QVAGVASLMLAVNPNLTPAQIAQKLASTARPSPATASCLARAPGAGIVDAGTVVASATK HHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]