Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446766
Identifier: 126446766
GI number: 126446766
Start: 1948615
End: 1949046
Strand: Reverse
Name: 126446766
Synonym: BMA10247_A2015
Alternate gene names: NA
Gene position: 1949046-1948615 (Counterclockwise)
Preceding gene: 126447326
Following gene: 126446064
Centisome position: 82.84
GC content: 62.27
Gene sequence:
>432_bases GTGAGCGATCTTCAACTCTACAACAAGCTGTCGAAACGGATTCGTCGCCATTCGCTGCAAGAGGTCGTGGCCGACCACTT GGTCGATCTGATGAATCACGCGATCCGCGGTGCGCGCATGCGCATCGCGGACGACAGCCCGGCCGCGCATTCGGTGCTGA ACTTCGGTTGTCCGCCGATGCAGATGGCCGGTGCGACGAAGATCAATCCGGTTCATGCGGCCGCGCATATCTGCGAGGTG ATTCGCCGCTTCGAGCCGCGCGTGGACCCTGCCAGCACGGTGGTCAAGCCGCGCACGGAGAGCCGCAAGCGCCTCGCGCA GACGATTTATTTCGACGTGTCGATGAAGGCGCGCGAAGACGGAGCCGAACTCAGGGCGAGCCTCGCGCTCGACTATCTGA GTGGTTATTTCAGCCTGGCGGACGACCGATGA
Upstream 100 bases:
>100_bases AAGCAGAACGCGCCGATCTAACCCGTCGGAAGGTTCTGGTTTCCAGGCTTAACCTTGGGCAGTGTTGTGGCCTCGCGCCA CAACACTCGGGAACACGCAC
Downstream 100 bases:
>100_bases GCGACGAGCAGCGATGAACTTCCTCGATCACTACAACGACGAATTGCGCCAGTTGCGCGATGCGGGCGCACGCTTCTCCA AGGAGCACCCGCAGGTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSDLQLYNKLSKRIRRHSLQEVVADHLVDLMNHAIRGARMRIADDSPAAHSVLNFGCPPMQMAGATKINPVHAAAHICEV IRRFEPRVDPASTVVKPRTESRKRLAQTIYFDVSMKAREDGAELRASLALDYLSGYFSLADDR
Sequences:
>Translated_143_residues MSDLQLYNKLSKRIRRHSLQEVVADHLVDLMNHAIRGARMRIADDSPAAHSVLNFGCPPMQMAGATKINPVHAAAHICEV IRRFEPRVDPASTVVKPRTESRKRLAQTIYFDVSMKAREDGAELRASLALDYLSGYFSLADDR >Mature_142_residues SDLQLYNKLSKRIRRHSLQEVVADHLVDLMNHAIRGARMRIADDSPAAHSVLNFGCPPMQMAGATKINPVHAAAHICEVI RRFEPRVDPASTVVKPRTESRKRLAQTIYFDVSMKAREDGAELRASLALDYLSGYFSLADDR
Specific function: Unknown
COG id: COG3518
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16059; Mature: 15927
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLQLYNKLSKRIRRHSLQEVVADHLVDLMNHAIRGARMRIADDSPAAHSVLNFGCPPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCH QMAGATKINPVHAAAHICEVIRRFEPRVDPASTVVKPRTESRKRLAQTIYFDVSMKARED HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH GAELRASLALDYLSGYFSLADDR HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDLQLYNKLSKRIRRHSLQEVVADHLVDLMNHAIRGARMRIADDSPAAHSVLNFGCPPM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCH QMAGATKINPVHAAAHICEVIRRFEPRVDPASTVVKPRTESRKRLAQTIYFDVSMKARED HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH GAELRASLALDYLSGYFSLADDR HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA