Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446758
Identifier: 126446758
GI number: 126446758
Start: 988254
End: 989144
Strand: Reverse
Name: 126446758
Synonym: BMA10247_A1052
Alternate gene names: NA
Gene position: 989144-988254 (Counterclockwise)
Preceding gene: 126446706
Following gene: 126447129
Centisome position: 42.04
GC content: 69.58
Gene sequence:
>891_bases ATGCCGCCCGCCTTCGTCCAGACCGTCGAAACCCGCTTTGCCGAGCTCACGCCCACGGCCAAGCGCATCGCGAGCTACAT GCTCGCGAACCTTGAACGCCTGGGCCTCGAAACCGCGGACCAGATCGCGCGCCAGACCGGCACGAGCGGCATCTCGGTCG GGCGCTTCCTGCGCAGCGTCGGCTATCGCAATCTCGACGACCTGAAGCGCGAGCTGCGCGGCACGGCCGAGCGCTCCTGG ATGATCACCGACCGCCTCGACGAATACCGTCGCGTGACGGGCGCGAACGCGCCGGCGCGCGACGAGGCCGCGCCGGGCGG CGCGCCCGGCGCGCTCGACGACGCGCTCGCGCGCGAGCTCGACGCGATCCGCCATGTGTACCAGCTCGCGCGCACGCCGG GCTTCGCGCAAGTCGCGGATCGCATCGCGCAAGCCGACGCGGTGTTCATCCTCGGCATCCAGTCGACGCGCGGGATCAGC AACGCATTCCACAGCTACCTCGAATACCTGCGCCCGCGCGTGTTCTATTCGGACGGCATGTCCGGCTCGTACGTCGATTC GCTGAATTCCGAATTCGCCGATCCGTACTGCATCGTCACCGACACGCGCGCGTACTCGCGCATCGCGCGGCGCTATTGCG AGGCGGCCGGCGCGCGCGGCGTGCGCTTCGCGCTCGTCACCGACGTCTACTGCCCGTGGGCGCGCGAGCTGCCGTGCGAC CTGCTGCAGGTGAAGACCGACGTCGGCCAGTTCTGGGATTCGCTCGCGCCGCTCACGTGCCTGTTCAACCTGCTGATCAG CGCGCTCGTCGACCGGCTCGGCGGCACGATCGACGCGCGCGTCGCGCGCAACCGCGAGCTGCAGCGCGAGCTCGATCAAT TCGAACCCTGA
Upstream 100 bases:
>100_bases GCTCATAACGATAGATTTTTGGGTATGGCGCACATTATTTTGTCTTTGTTAGATAGATGTCACTTTCATCAATATCGACA GCCAGCTAACACACGCGTCC
Downstream 100 bases:
>100_bases AGCCGCCGGAGCGCCGCCCTTGAAGACATCCGCCCATCGCCTCGTCGAGATCGCGCCGCACACGCACGGCGTCGACGTCG ATCTCGTCTACGCGACCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator RpiR Family; SIS Domain-Containing Protein; SIS Domain Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPPAFVQTVETRFAELTPTAKRIASYMLANLERLGLETADQIARQTGTSGISVGRFLRSVGYRNLDDLKRELRGTAERSW MITDRLDEYRRVTGANAPARDEAAPGGAPGALDDALARELDAIRHVYQLARTPGFAQVADRIAQADAVFILGIQSTRGIS NAFHSYLEYLRPRVFYSDGMSGSYVDSLNSEFADPYCIVTDTRAYSRIARRYCEAAGARGVRFALVTDVYCPWARELPCD LLQVKTDVGQFWDSLAPLTCLFNLLISALVDRLGGTIDARVARNRELQRELDQFEP
Sequences:
>Translated_296_residues MPPAFVQTVETRFAELTPTAKRIASYMLANLERLGLETADQIARQTGTSGISVGRFLRSVGYRNLDDLKRELRGTAERSW MITDRLDEYRRVTGANAPARDEAAPGGAPGALDDALARELDAIRHVYQLARTPGFAQVADRIAQADAVFILGIQSTRGIS NAFHSYLEYLRPRVFYSDGMSGSYVDSLNSEFADPYCIVTDTRAYSRIARRYCEAAGARGVRFALVTDVYCPWARELPCD LLQVKTDVGQFWDSLAPLTCLFNLLISALVDRLGGTIDARVARNRELQRELDQFEP >Mature_295_residues PPAFVQTVETRFAELTPTAKRIASYMLANLERLGLETADQIARQTGTSGISVGRFLRSVGYRNLDDLKRELRGTAERSWM ITDRLDEYRRVTGANAPARDEAAPGGAPGALDDALARELDAIRHVYQLARTPGFAQVADRIAQADAVFILGIQSTRGISN AFHSYLEYLRPRVFYSDGMSGSYVDSLNSEFADPYCIVTDTRAYSRIARRYCEAAGARGVRFALVTDVYCPWARELPCDL LQVKTDVGQFWDSLAPLTCLFNLLISALVDRLGGTIDARVARNRELQRELDQFEP
Specific function: Unknown
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32971; Mature: 32839
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAFVQTVETRFAELTPTAKRIASYMLANLERLGLETADQIARQTGTSGISVGRFLRSV CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHH GYRNLDDLKRELRGTAERSWMITDRLDEYRRVTGANAPARDEAAPGGAPGALDDALAREL CCCCHHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH DAIRHVYQLARTPGFAQVADRIAQADAVFILGIQSTRGISNAFHSYLEYLRPRVFYSDGM HHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCHHEECCCC SGSYVDSLNSEFADPYCIVTDTRAYSRIARRYCEAAGARGVRFALVTDVYCPWARELPCD CCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCHH LLQVKTDVGQFWDSLAPLTCLFNLLISALVDRLGGTIDARVARNRELQRELDQFEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPAFVQTVETRFAELTPTAKRIASYMLANLERLGLETADQIARQTGTSGISVGRFLRSV CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHH GYRNLDDLKRELRGTAERSWMITDRLDEYRRVTGANAPARDEAAPGGAPGALDDALAREL CCCCHHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH DAIRHVYQLARTPGFAQVADRIAQADAVFILGIQSTRGISNAFHSYLEYLRPRVFYSDGM HHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCHHEECCCC SGSYVDSLNSEFADPYCIVTDTRAYSRIARRYCEAAGARGVRFALVTDVYCPWARELPCD CCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCHH LLQVKTDVGQFWDSLAPLTCLFNLLISALVDRLGGTIDARVARNRELQRELDQFEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA