Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446660
Identifier: 126446660
GI number: 126446660
Start: 1794430
End: 1795122
Strand: Direct
Name: 126446660
Synonym: BMA10247_A1863
Alternate gene names: NA
Gene position: 1794430-1795122 (Clockwise)
Preceding gene: 126446573
Following gene: 126447460
Centisome position: 76.27
GC content: 69.84
Gene sequence:
>693_bases ATGGCTGCCTTCTACGATTTCGGCGCGCGCAAGCTGCGCGACCTCTACGATCGACGGTTGCACTGCGGCGCCGTGCTGGA CACGGCCACGCTGTTCCCGGACGCCGCGCGCTTCACGCACGCGTGGCGCGCGATTCGCGACGAGGCGCTCGCCGTGTCGC GCGACCTGAACCGGATTCCGCGCTTTCACGAAATCATGCGCGAGCAGGCGGCGATTTCGGCGAACGACGCGCGCGACTGG CGAATGTTCATCATGCAGGCGTACGGCGTGCGCTTCGCGCAAAACCTCGGGCGCTGCCCGACGCTCGCGTCGATCGTCGC GGCGTCGCCCGACGTGCTGTCCGCGTCGTTCTCGTTCCTCGCGCCCGGCAAGCACATCCCGCCGCATCGCGGGCCGTTTC GCGGCATCCTGCGCGGCTATCTGGTGCTGTCGATGCCGATGCGCGCGAACGGCACGCCGGCCGCCGTGCTGAAGATCGAC GGCCGCGACCACCGGCTGCGCGACGGCCAATTCCTGCTCTGGGACGACACGTTCGAGCACGAAGTCTGGAACGAGAGCGA CGCCGTGCGGATCGTGCTGCTGCTCGATATCCGCCGCCGCGATCTGCCGCCCGCGCTCGCGCTGCTGTCGGGCGCGCTGA TCCGGCTCGTGCGCGTCGCGATCCGGCTACGCGGCGGCGCGATTCCGGTCTAG
Upstream 100 bases:
>100_bases CTTGATTTCGCCCCCGTGTGCCGACGGACGCGCGAACGGGCGACCGAACCGGCGACCGAACGACCGGCCGCGCGACGCGT CGGCCACGAACGCTTGGGAT
Downstream 100 bases:
>100_bases GTTCGTTCGCACGCCGGCCGCGGGCTCGAGCCGGCCGAGGCCGCGCGCCTCGCACTACCTCGCACTACCTCGCGCTATCT GCGCCTTATCCCGTCGTCTC
Product: beta-hydroxylase
Products: NA
Alternate protein names: Membrane-Bound Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Lipid A-Myristate Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Lipopolysaccharide Biosynthetic Protein; Dioxygenase; Peptide-Aspartate Beta-Dioxygenase
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAAFYDFGARKLRDLYDRRLHCGAVLDTATLFPDAARFTHAWRAIRDEALAVSRDLNRIPRFHEIMREQAAISANDARDW RMFIMQAYGVRFAQNLGRCPTLASIVAASPDVLSASFSFLAPGKHIPPHRGPFRGILRGYLVLSMPMRANGTPAAVLKID GRDHRLRDGQFLLWDDTFEHEVWNESDAVRIVLLLDIRRRDLPPALALLSGALIRLVRVAIRLRGGAIPV
Sequences:
>Translated_230_residues MAAFYDFGARKLRDLYDRRLHCGAVLDTATLFPDAARFTHAWRAIRDEALAVSRDLNRIPRFHEIMREQAAISANDARDW RMFIMQAYGVRFAQNLGRCPTLASIVAASPDVLSASFSFLAPGKHIPPHRGPFRGILRGYLVLSMPMRANGTPAAVLKID GRDHRLRDGQFLLWDDTFEHEVWNESDAVRIVLLLDIRRRDLPPALALLSGALIRLVRVAIRLRGGAIPV >Mature_229_residues AAFYDFGARKLRDLYDRRLHCGAVLDTATLFPDAARFTHAWRAIRDEALAVSRDLNRIPRFHEIMREQAAISANDARDWR MFIMQAYGVRFAQNLGRCPTLASIVAASPDVLSASFSFLAPGKHIPPHRGPFRGILRGYLVLSMPMRANGTPAAVLKIDG RDHRLRDGQFLLWDDTFEHEVWNESDAVRIVLLLDIRRRDLPPALALLSGALIRLVRVAIRLRGGAIPV
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI258613943, Length=170, Percent_Identity=27.0588235294118, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI14589866, Length=170, Percent_Identity=27.0588235294118, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24654024, Length=184, Percent_Identity=30.9782608695652, Blast_Score=86, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25918; Mature: 25787
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFYDFGARKLRDLYDRRLHCGAVLDTATLFPDAARFTHAWRAIRDEALAVSRDLNRIP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCH RFHEIMREQAAISANDARDWRMFIMQAYGVRFAQNLGRCPTLASIVAASPDVLSASFSFL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCHHHC APGKHIPPHRGPFRGILRGYLVLSMPMRANGTPAAVLKIDGRDHRLRDGQFLLWDDTFEH CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEECCCCEEEECCCHHH EVWNESDAVRIVLLLDIRRRDLPPALALLSGALIRLVRVAIRLRGGAIPV HHCCCCCCEEEEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AAFYDFGARKLRDLYDRRLHCGAVLDTATLFPDAARFTHAWRAIRDEALAVSRDLNRIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCH RFHEIMREQAAISANDARDWRMFIMQAYGVRFAQNLGRCPTLASIVAASPDVLSASFSFL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCHHHC APGKHIPPHRGPFRGILRGYLVLSMPMRANGTPAAVLKIDGRDHRLRDGQFLLWDDTFEH CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEECCCCEEEECCCHHH EVWNESDAVRIVLLLDIRRRDLPPALALLSGALIRLVRVAIRLRGGAIPV HHCCCCCCEEEEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA