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The map label for this gene is rfaQ [C]

Identifier: 126446591

GI number: 126446591

Start: 2203702

End: 2204817

Strand: Reverse

Name: rfaQ [C]

Synonym: BMA10247_A2273

Alternate gene names: 126446591

Gene position: 2204817-2203702 (Counterclockwise)

Preceding gene: 126447001

Following gene: 126446333

Centisome position: 93.71

GC content: 73.92

Gene sequence:

>1116_bases
ATGAGCGGCGATCCTTCCGCGCGGCCCGCGGCCGCCGAGCGGCGCGGCACGGGCGAATACGCGAGCATCGCGGTGTTTCG
CGCGCTGCAGCTCGGCGACATGCTGTGCGCGGTGCCCGCGCTGCGCGCGCTGCGGCGCGGCGAGCCGCAGGCGCGGATCA
CGCTGATCGGGCTGCCGTGGGCGAAGGCGTTCGCCGAGCGCTTCTCCGATTACGTCGACGACTTCATCGAATTCCCCGGC
GCGCCGGGGCTCGTCGAGCAGCCGCACGACGTCGAGCGGCTCGCCGCGTTCGTCGCCGAATGCCGGTCGCGCCGTTTCGA
TCTCGCGATCCAGCTGCATGGCAGCGGCGCGCAATCGAACGCGATCGTCGCGGGCCTCGGCGCGGCGTCGACGGCGGGTT
TCGCGCCCGATGCGTTCGCGGCCGGCGAGCACGCCGCGCCGCGGCTCGACCGCACGATCGCATGGCCGTCGGCGCTGCCG
GAAATCGCCCGCTACACGAAGCTGATGCGCCGGCTCGGCTACGACGACTGGGGCGACTATCTGGAGTTTCCGCTCGGCGG
CCTCGATTACACGATCTGCCGCGTGCTGTGCGAGCAGCACGATCTGCGGCCGCGCGAATACGCGGTCGTGCATCCGGGCG
CGCGCATGCAGTCGCGCCGCTGGCCGGTCGCGCGCTTCGCGGGCGTCGCGCGCGCGCTCGCCGAGCGCGGGCTGCGCATC
GTGCTGACGGGCACGCGCGGCGAGGCGGCGCTCGCCGACGCGTTCGCCGCGCAACTGGGCGCGCCGTTCGTCGATCTGTG
CGGCCGCACGCCGCTCGGCGCGCTCGGCGCGCTGATCGGCCGCAGCCGCCTCGTCGTCTGCAACGATACCGGCGTGTCGC
ACGTGGCCGCCGCGCTCGGCGCGCCGAGCGTCGTGATCGCGTGCGGCAGCGACGCCGCGCGCTGGGCGCCGCTCGATCGC
GAGCGCCATCGCGTGCTCGCCGACTATCCGCCGTGCCGCCCGTGCATGTTCGAAACCTGTCCGTACGACCACGCGTGCGC
GAACGCGATCGGCGTCGAGGACGTCGTCAGGCGCGCGGACGCACTGCTCGCCGTGGAGCCGCATCATGTCGCCTAA

Upstream 100 bases:

>100_bases
CGTCGCACGTCGCGGAGATGATCGTCACGTCGATCGCGATTCCGCCCGTGTCGCTGTACTGGCGGCTGCGCGGCGCGCTC
CACTTCCGGGTGCTGTTCCT

Downstream 100 bases:

>100_bases
GCGTTTGCGCGTGCTCACGTGGCACGTGCACGGCAACTACCTGTACTACCTGTCGCAGGCGCCGCACGATTTCTACGTCA
TCACGAAGCCGAACCATCCG

Product: putative ADP-heptose--LPS heptosyltransferase II

Products: NA

Alternate protein names: Lipopolysaccharide Heptosyltransferase II; Glycosyltransferase; Heptosyltransferase Family Protein; Lipopolysaccharide Heptosyltransferase III; ADP-HeptoseLPS Heptosyltransferase; ADP-Heptose-LPS Heptosyltransferase II; Transferase; Glycosyl Transferase; ADP-Heptose-LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase I; Family 9 Glycosyl Transferase; ADP-HeptoseLPS Heptosyltransferase II; Heptosyltransferase; Lipopolysaccharide Heptosyltransferase; LPS Biosynthesis Related Glycosyltransferase; Glycosyl Transferase ADP-HeptoseLPS Heptosyltransferase; ADP-Heptose-LPS Heptosyltransferase II RfaF; ADP-HeptoseLPS Heptosyltransferase-Like Protein; Lipopolysaccharide Core Biosynthesis Heptosyltransferase; Heptosyl Transferase Glycosyltransferase Family 9 Protein; Hydrolase; Heptosyl Transferase; Heptosyltransferase III WaaQ

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPWAKAFAERFSDYVDDFIEFPG
APGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSNAIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALP
EIARYTKLMRRLGYDDWGDYLEFPLGGLDYTICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRI
VLTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALGAPSVVIACGSDAARWAPLDR
ERHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRADALLAVEPHHVA

Sequences:

>Translated_371_residues
MSGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPWAKAFAERFSDYVDDFIEFPG
APGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSNAIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALP
EIARYTKLMRRLGYDDWGDYLEFPLGGLDYTICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRI
VLTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALGAPSVVIACGSDAARWAPLDR
ERHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRADALLAVEPHHVA
>Mature_370_residues
SGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPWAKAFAERFSDYVDDFIEFPGA
PGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSNAIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALPE
IARYTKLMRRLGYDDWGDYLEFPLGGLDYTICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRIV
LTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALGAPSVVIACGSDAARWAPLDRE
RHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRADALLAVEPHHVA

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39854; Mature: 39723

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS01082 RIBOSOMAL_L7AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPW
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCH
AKAFAERFSDYVDDFIEFPGAPGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
AIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALPEIARYTKLMRRLGYDDWGDY
CEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHH
LEFPLGGLDYTICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRI
HHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCHHHHHHHHHHHHHCCCEE
VLTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALG
EEECCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHC
APSVVIACGSDAARWAPLDRERHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRAD
CCEEEEEECCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH
ALLAVEPHHVA
HEEECCCCCCC
>Mature Secondary Structure 
SGDPSARPAAAERRGTGEYASIAVFRALQLGDMLCAVPALRALRRGEPQARITLIGLPW
CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCH
AKAFAERFSDYVDDFIEFPGAPGLVEQPHDVERLAAFVAECRSRRFDLAIQLHGSGAQSN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
AIVAGLGAASTAGFAPDAFAAGEHAAPRLDRTIAWPSALPEIARYTKLMRRLGYDDWGDY
CEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHH
LEFPLGGLDYTICRVLCEQHDLRPREYAVVHPGARMQSRRWPVARFAGVARALAERGLRI
HHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCHHHHHHHHHHHHHCCCEE
VLTGTRGEAALADAFAAQLGAPFVDLCGRTPLGALGALIGRSRLVVCNDTGVSHVAAALG
EEECCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHC
APSVVIACGSDAARWAPLDRERHRVLADYPPCRPCMFETCPYDHACANAIGVEDVVRRAD
CCEEEEEECCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH
ALLAVEPHHVA
HEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA