Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is asnB-2 [H]
Identifier: 126446544
GI number: 126446544
Start: 2136524
End: 2138392
Strand: Reverse
Name: asnB-2 [H]
Synonym: BMA10247_A2198
Alternate gene names: 126446544
Gene position: 2138392-2136524 (Counterclockwise)
Preceding gene: 126445883
Following gene: 126445973
Centisome position: 90.89
GC content: 69.45
Gene sequence:
>1869_bases ATGTGCGGCATCACCGGATGGATCGATTTCGCCCGCGATCTGCGCAACGAAGCGCCGATCGTCGACACGATGACCGATAC GCTCGCGCGCCGCGGGCCCGATGCGCGCGGCGTGTGGCTCGACACGCACGCCGCGCTGGGGCACCGGCGGCTGTCGATCA TCGATCCCGAGCGCGGCGCGCAGCCGATGCTCACGCCCGAGCGCGGGCCGCGCGGCCTGCCGCGCGCGGTCATCTCGTAT GCGGGCGAAACCTACAACTTCCGCGAATTGCGGGCCGAGCTGGGCGCGCTCGGCCACCGGTTCGACACGCATTGCGATAC CGAGGTGGTGCTGCGCGCGTATCTCGAATGGGGCGCGGCGTTCGTCGACCGTCTCAACGGGATGTATTCGATCGCGATCT GGGATACCGCGCGCGACGAACTGCTGCTCGTGCGCGACCGGCTCGGCGTGAAGCCGCTGTTCTACTATCCGACGGCGGAC GGCGTGATCTTCGGCTCGGAGCCGAAGGCGATCCTCGCGCATCCCGACGTGCGCGCGCGCACGTCGTCGGAGGGGCTTTG CGATGCGCTGCTGTTCCTGCGCACGCCGGGGCAGGTGCCGTTCTCGGGGATGCGCGAGGTGAAGCCCGGCCATGTGCTGC GCGTGCGGCGCGGCGGCCTCGCCGAGCAACGCTACTGGGCGCTCGAAGCGCGCCCGCACACCGACGATCTGCCGACGACG ATCGCGACGATCCGCGCGCTGCTCGACGACATCGTGTCGCGCCAGATGATCTCGGACGTGCCGCTGTGCGCGCTGCTGTC GGGCGGCGTCGATTCGAGCACCATCGCCGCGCTCGCGCAGAAGCGGCGGCGCGCGAACGGCGGCGGCGCGTTGTCGACAT TCTGCGTCGATTTCACCGGCCACACGCGCAACTTTCGCGCCGATCCGATTCGCCCGACGGCCGATGCGCCGTTCGCGCTC GAAGTCGCGCGGCACATCGGCAGCGATCACCATACGATCGAGCTGGACCAGGCCGGGCTGCTCGATCCGCAGGTGCGCGA AGCGGTGCTGCGCGCGTGGGACTTGCCGTTCAACTTCGCCGATCTCGACGTGTCGCTGCACCGGCTGTTCGCCGAGGTCC GCAAGCACGCCACCGTCGCGCTATCCGGCGAGGCGGCCGACGAGATCTTCGGCGGCTACCTGTGGTTCTCCGATCCGGCC GCGCGGCGTGCACACACGTTCCCGTGGCTGAAGCTGGGCGCGCATCGCGGGCTCGATCCGCGCGCGCTGTTTCATCGGTC GTTCATCGATGCGCTGCGACTCGGCGAATACGAAGCACAGCTCTACCGCGCGGCGCTCGCCGAAGTGCCGCGCCTCGACG GCGAGAACGCGGAGGACCGCCGCACGCGCGAGCTGCATTACCTGACGCTCACGCGCTGGCTGCCGGTGCTGCTCGACAAG AAGGACCGGATGGGGATGGCAAGCGGCCTCGAGGGGCGCGTGCCGTTCTGCGATCACCGGCTCGTCGAGTATGTGTTCAA CATCCCGTGGGCGATGAAGACGTTCAGCGGCCAGGAGAAGGCGCTGCTGCGCGCGGCGGCGGCCGATCTGCTGCCCGAAT CGGTGCTGAACCGCAAGAAGGCCGCGTATCCGTCGATTCAGGCGCCGGGCTATGACCGCGGCCTGATCGAGCGCCTCAAT CGCGCGATCGCGGCCGGCCGCGCGCCGCTCGAACCGTTCATCGACGCCGGCGCGCTGCGCGGCCTGACCGAGAAGACCGC CGCCGGCAGCCTTTCGGAATTCGAACGAATCCTGCTGGAGTCGAGCAGCCGGCTCAACGACTGGCTCGATCTCTATCGTG TCGAGCTCGACGGCGTGCCGGCGGGCTGA
Upstream 100 bases:
>100_bases CATGGGCGACTACGACGCGTCGGGCTGGCTGCGCGGCCCCTGGCTGCACGGCTGAAGCGCACGCTCGAACCCCTGTCTTT TCAACTCAAAAGGAGCAAGC
Downstream 100 bases:
>100_bases TCCCTTGACGAACATTTGGAGTGAACTGATGCAAGCCATCGAAATCCGCGAGACGGGCGGCCCCGACGTTCTCGAGTACG TGACGCGCGCCGCGCGCGAG
Product: asparagine synthase (glutamine-hydrolyzing)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MCGITGWIDFARDLRNEAPIVDTMTDTLARRGPDARGVWLDTHAALGHRRLSIIDPERGAQPMLTPERGPRGLPRAVISY AGETYNFRELRAELGALGHRFDTHCDTEVVLRAYLEWGAAFVDRLNGMYSIAIWDTARDELLLVRDRLGVKPLFYYPTAD GVIFGSEPKAILAHPDVRARTSSEGLCDALLFLRTPGQVPFSGMREVKPGHVLRVRRGGLAEQRYWALEARPHTDDLPTT IATIRALLDDIVSRQMISDVPLCALLSGGVDSSTIAALAQKRRRANGGGALSTFCVDFTGHTRNFRADPIRPTADAPFAL EVARHIGSDHHTIELDQAGLLDPQVREAVLRAWDLPFNFADLDVSLHRLFAEVRKHATVALSGEAADEIFGGYLWFSDPA ARRAHTFPWLKLGAHRGLDPRALFHRSFIDALRLGEYEAQLYRAALAEVPRLDGENAEDRRTRELHYLTLTRWLPVLLDK KDRMGMASGLEGRVPFCDHRLVEYVFNIPWAMKTFSGQEKALLRAAAADLLPESVLNRKKAAYPSIQAPGYDRGLIERLN RAIAAGRAPLEPFIDAGALRGLTEKTAAGSLSEFERILLESSSRLNDWLDLYRVELDGVPAG
Sequences:
>Translated_622_residues MCGITGWIDFARDLRNEAPIVDTMTDTLARRGPDARGVWLDTHAALGHRRLSIIDPERGAQPMLTPERGPRGLPRAVISY AGETYNFRELRAELGALGHRFDTHCDTEVVLRAYLEWGAAFVDRLNGMYSIAIWDTARDELLLVRDRLGVKPLFYYPTAD GVIFGSEPKAILAHPDVRARTSSEGLCDALLFLRTPGQVPFSGMREVKPGHVLRVRRGGLAEQRYWALEARPHTDDLPTT IATIRALLDDIVSRQMISDVPLCALLSGGVDSSTIAALAQKRRRANGGGALSTFCVDFTGHTRNFRADPIRPTADAPFAL EVARHIGSDHHTIELDQAGLLDPQVREAVLRAWDLPFNFADLDVSLHRLFAEVRKHATVALSGEAADEIFGGYLWFSDPA ARRAHTFPWLKLGAHRGLDPRALFHRSFIDALRLGEYEAQLYRAALAEVPRLDGENAEDRRTRELHYLTLTRWLPVLLDK KDRMGMASGLEGRVPFCDHRLVEYVFNIPWAMKTFSGQEKALLRAAAADLLPESVLNRKKAAYPSIQAPGYDRGLIERLN RAIAAGRAPLEPFIDAGALRGLTEKTAAGSLSEFERILLESSSRLNDWLDLYRVELDGVPAG >Mature_622_residues MCGITGWIDFARDLRNEAPIVDTMTDTLARRGPDARGVWLDTHAALGHRRLSIIDPERGAQPMLTPERGPRGLPRAVISY AGETYNFRELRAELGALGHRFDTHCDTEVVLRAYLEWGAAFVDRLNGMYSIAIWDTARDELLLVRDRLGVKPLFYYPTAD GVIFGSEPKAILAHPDVRARTSSEGLCDALLFLRTPGQVPFSGMREVKPGHVLRVRRGGLAEQRYWALEARPHTDDLPTT IATIRALLDDIVSRQMISDVPLCALLSGGVDSSTIAALAQKRRRANGGGALSTFCVDFTGHTRNFRADPIRPTADAPFAL EVARHIGSDHHTIELDQAGLLDPQVREAVLRAWDLPFNFADLDVSLHRLFAEVRKHATVALSGEAADEIFGGYLWFSDPA ARRAHTFPWLKLGAHRGLDPRALFHRSFIDALRLGEYEAQLYRAALAEVPRLDGENAEDRRTRELHYLTLTRWLPVLLDK KDRMGMASGLEGRVPFCDHRLVEYVFNIPWAMKTFSGQEKALLRAAAADLLPESVLNRKKAAYPSIQAPGYDRGLIERLN RAIAAGRAPLEPFIDAGALRGLTEKTAAGSLSEFERILLESSSRLNDWLDLYRVELDGVPAG
Specific function: Asparagine synthetase involved in sporulation [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Homo sapiens, GI168229248, Length=419, Percent_Identity=27.6849642004773, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI168229252, Length=419, Percent_Identity=27.6849642004773, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI168229250, Length=419, Percent_Identity=27.6849642004773, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI296010848, Length=392, Percent_Identity=27.5510204081633, Blast_Score=114, Evalue=4e-25, Organism=Homo sapiens, GI296010852, Length=317, Percent_Identity=27.1293375394322, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI296010850, Length=317, Percent_Identity=27.1293375394322, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1786889, Length=427, Percent_Identity=30.4449648711944, Blast_Score=154, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6321563, Length=438, Percent_Identity=27.6255707762557, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6325403, Length=444, Percent_Identity=28.3783783783784, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI45553209, Length=545, Percent_Identity=27.8899082568807, Blast_Score=147, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 69181; Mature: 69181
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGITGWIDFARDLRNEAPIVDTMTDTLARRGPDARGVWLDTHAALGHRRLSIIDPERGA CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHCCCEEEEECCCCCC QPMLTPERGPRGLPRAVISYAGETYNFRELRAELGALGHRFDTHCDTEVVLRAYLEWGAA CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH FVDRLNGMYSIAIWDTARDELLLVRDRLGVKPLFYYPTADGVIFGSEPKAILAHPDVRAR HHHHCCCEEEEEEECCCCCCEEEEHHHCCCCEEEEECCCCCEEECCCCCEEEECCCCCCC TSSEGLCDALLFLRTPGQVPFSGMREVKPGHVLRVRRGGLAEQRYWALEARPHTDDLPTT CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHH IATIRALLDDIVSRQMISDVPLCALLSGGVDSSTIAALAQKRRRANGGGALSTFCVDFTG HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECC HTRNFRADPIRPTADAPFALEVARHIGSDHHTIELDQAGLLDPQVREAVLRAWDLPFNFA CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHH DLDVSLHRLFAEVRKHATVALSGEAADEIFGGYLWFSDPAARRAHTFPWLKLGAHRGLDP HHHHHHHHHHHHHHHCCEEEECCCHHHHHHCCEEEECCHHHHHHCCCCHHHHCCCCCCCH RALFHRSFIDALRLGEYEAQLYRAALAEVPRLDGENAEDRRTRELHYLTLTRWLPVLLDK HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC KDRMGMASGLEGRVPFCDHRLVEYVFNIPWAMKTFSGQEKALLRAAAADLLPESVLNRKK CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AAYPSIQAPGYDRGLIERLNRAIAAGRAPLEPFIDAGALRGLTEKTAAGSLSEFERILLE HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH SSSRLNDWLDLYRVELDGVPAG CCHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure MCGITGWIDFARDLRNEAPIVDTMTDTLARRGPDARGVWLDTHAALGHRRLSIIDPERGA CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHCCCEEEEECCCCCC QPMLTPERGPRGLPRAVISYAGETYNFRELRAELGALGHRFDTHCDTEVVLRAYLEWGAA CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH FVDRLNGMYSIAIWDTARDELLLVRDRLGVKPLFYYPTADGVIFGSEPKAILAHPDVRAR HHHHCCCEEEEEEECCCCCCEEEEHHHCCCCEEEEECCCCCEEECCCCCEEEECCCCCCC TSSEGLCDALLFLRTPGQVPFSGMREVKPGHVLRVRRGGLAEQRYWALEARPHTDDLPTT CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHH IATIRALLDDIVSRQMISDVPLCALLSGGVDSSTIAALAQKRRRANGGGALSTFCVDFTG HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECC HTRNFRADPIRPTADAPFALEVARHIGSDHHTIELDQAGLLDPQVREAVLRAWDLPFNFA CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHH DLDVSLHRLFAEVRKHATVALSGEAADEIFGGYLWFSDPAARRAHTFPWLKLGAHRGLDP HHHHHHHHHHHHHHHCCEEEECCCHHHHHHCCEEEECCHHHHHHCCCCHHHHCCCCCCCH RALFHRSFIDALRLGEYEAQLYRAALAEVPRLDGENAEDRRTRELHYLTLTRWLPVLLDK HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC KDRMGMASGLEGRVPFCDHRLVEYVFNIPWAMKTFSGQEKALLRAAAADLLPESVLNRKK CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AAYPSIQAPGYDRGLIERLNRAIAAGRAPLEPFIDAGALRGLTEKTAAGSLSEFERILLE HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH SSSRLNDWLDLYRVELDGVPAG CCHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353931; 9384377; 10498721 [H]