Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is wtpB [H]
Identifier: 126446498
GI number: 126446498
Start: 2017796
End: 2018644
Strand: Reverse
Name: wtpB [H]
Synonym: BMA10247_A2084
Alternate gene names: 126446498
Gene position: 2018644-2017796 (Counterclockwise)
Preceding gene: 126447193
Following gene: 126445843
Centisome position: 85.8
GC content: 67.49
Gene sequence:
>849_bases ATGCGTTCATCCACCACCGCCGGGTTTGCCGGCGGTATTCCGTTTCGTCGCGGCAAGCGGCGCCCGTCGTTCGGCGCCAT CGTCGTCAACGGCGTCGTCGCGCTGTTCGCGCTGTATCTACTGATGCCGATCGTGCTGCTGCTGATCGGATCGATCGGGC AGAGTTGGACGAACACGCTGCTGCCCGCCGGCTTCACGTGGCGCTGGTTCGCCGAACTGGCCGCCGATCCGAGCTTGCGC CGCGCGTTCAGCGTGAGCTTCGTCGTCGCGCTCGCGTGCTGCGCGCTCGACACGTTGGCCGGCGTGCCGCTCGCGTATGC GCTGCATCATCGCGCGCTTCGCGGCCGCGGCGTTGCCGCGCGCGTCGTGATGCTGACGCCGATCGGCGTGCCGGCGCTCA CGCTCGGCTTCGGCTACATCGTGGTATTCGGCGGCGACGCGTTGCCGTGGCTCGGCACGCTGCCGCTGATGATCGCCGCG CATGCGGTGCTGACGCTGCCGTATCTGCTGCAGACGTTGTTGAGCGATCTGCGCCACCTCGATCTCGCGAAGCTCGAGGC CTGTGCGGCAACGCTCGGCGCGCCGCCGCTGCGGCAGTTTTTCACGATCGTGCTGCCGAACCTGCGGCAGAGCCTTTTTT CCGGGCTCGTGATGGTCGCGGCGCTATCGATCGGCGAGTTCCAGGTATCGAACCTGATCGCCGGCTTTCGCTACCGCAAT TTCCCCGTCGTGCTGCTGCAGGCGTTCTACGGCGCGTCCGGCATCGCCTGCGGGGCGAGTGTCGTGCTGCTGCTGCTCGC CGTACTCGCGACGCTCGCGTCGACCCACACCGTGCAACGACTGAAGTGA
Upstream 100 bases:
>100_bases GTCGCGCGCCCACACTGGCGGCCGTCGTCGCGATTCGCGCAACGCCTGCTCCGGCGGGCGTTTCGCGTGACGCTTCCCTT CGTCGCCCGTGAGTGCCGCC
Downstream 100 bases:
>100_bases AGCCATGAGTCTCGAATTCGACAACGTCAGTTTCAGATATCCGGGCGGGGCGCACGGCGTCGACGCCGTCACGCTGCACG CGCAGCCGGGCGAGCTGCTC
Product: ABC transporter, permease protein
Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MRSSTTAGFAGGIPFRRGKRRPSFGAIVVNGVVALFALYLLMPIVLLLIGSIGQSWTNTLLPAGFTWRWFAELAADPSLR RAFSVSFVVALACCALDTLAGVPLAYALHHRALRGRGVAARVVMLTPIGVPALTLGFGYIVVFGGDALPWLGTLPLMIAA HAVLTLPYLLQTLLSDLRHLDLAKLEACAATLGAPPLRQFFTIVLPNLRQSLFSGLVMVAALSIGEFQVSNLIAGFRYRN FPVVLLQAFYGASGIACGASVVLLLLAVLATLASTHTVQRLK
Sequences:
>Translated_282_residues MRSSTTAGFAGGIPFRRGKRRPSFGAIVVNGVVALFALYLLMPIVLLLIGSIGQSWTNTLLPAGFTWRWFAELAADPSLR RAFSVSFVVALACCALDTLAGVPLAYALHHRALRGRGVAARVVMLTPIGVPALTLGFGYIVVFGGDALPWLGTLPLMIAA HAVLTLPYLLQTLLSDLRHLDLAKLEACAATLGAPPLRQFFTIVLPNLRQSLFSGLVMVAALSIGEFQVSNLIAGFRYRN FPVVLLQAFYGASGIACGASVVLLLLAVLATLASTHTVQRLK >Mature_282_residues MRSSTTAGFAGGIPFRRGKRRPSFGAIVVNGVVALFALYLLMPIVLLLIGSIGQSWTNTLLPAGFTWRWFAELAADPSLR RAFSVSFVVALACCALDTLAGVPLAYALHHRALRGRGVAARVVMLTPIGVPALTLGFGYIVVFGGDALPWLGTLPLMIAA HAVLTLPYLLQTLLSDLRHLDLAKLEACAATLGAPPLRQFFTIVLPNLRQSLFSGLVMVAALSIGEFQVSNLIAGFRYRN FPVVLLQAFYGASGIACGASVVLLLLAVLATLASTHTVQRLK
Specific function: Part of the ABC transporter complex wtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG1177
COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29997; Mature: 29997
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: PS00435 PEROXIDASE_1 ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSTTAGFAGGIPFRRGKRRPSFGAIVVNGVVALFALYLLMPIVLLLIGSIGQSWTNTL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LPAGFTWRWFAELAADPSLRRAFSVSFVVALACCALDTLAGVPLAYALHHRALRGRGVAA CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHE RVVMLTPIGVPALTLGFGYIVVFGGDALPWLGTLPLMIAAHAVLTLPYLLQTLLSDLRHL EEEEECCCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLAKLEACAATLGAPPLRQFFTIVLPNLRQSLFSGLVMVAALSIGEFQVSNLIAGFRYRN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC FPVVLLQAFYGASGIACGASVVLLLLAVLATLASTHTVQRLK CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSSTTAGFAGGIPFRRGKRRPSFGAIVVNGVVALFALYLLMPIVLLLIGSIGQSWTNTL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LPAGFTWRWFAELAADPSLRRAFSVSFVVALACCALDTLAGVPLAYALHHRALRGRGVAA CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHE RVVMLTPIGVPALTLGFGYIVVFGGDALPWLGTLPLMIAAHAVLTLPYLLQTLLSDLRHL EEEEECCCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLAKLEACAATLGAPPLRQFFTIVLPNLRQSLFSGLVMVAALSIGEFQVSNLIAGFRYRN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC FPVVLLQAFYGASGIACGASVVLLLLAVLATLASTHTVQRLK CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]
Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]