Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446457
Identifier: 126446457
GI number: 126446457
Start: 1803887
End: 1804786
Strand: Direct
Name: 126446457
Synonym: BMA10247_A1877
Alternate gene names: NA
Gene position: 1803887-1804786 (Clockwise)
Preceding gene: 126445634
Following gene: 126446657
Centisome position: 76.67
GC content: 67.67
Gene sequence:
>900_bases ATGTCTGACACGCTGCGACGCAAGCAAGCGGCGGATCATGCTATGCGCCACTGGGTCCATCAGAGCCGCGGCCCCGTGCC GATCGGCTCCGACGCGCACAAGCAGATGTTCTGCAACATGCTGCTCGACACCCACAACCCATACAAGCCGGCCGTCATCG ATTGGCCCGCCCTGCGCCCCGACGCGCTCCGGCGCCTGACGTCGCTGCCGATCTGGGACATCGCCGTACAAACCGAAGGC CGCGCGTCGGTTCGCGTCGCGACCTTCGCGTCGACGGTGCGCGATCCGCTGCTGCGCGCCGCGCTCGAGCTGGACGCCGC CGAGGAGGCGCGCCACAAGGTCGTGCTGTCGAAGCTCGTCCAAGCGTACGGCATCCGGCTCGCGCCCGAGCCCGCGTATC CGGCGCCGAAGGACGCCGAATGGGCATGGATGGTCACGGGCTTCAGCGAATGCATCGATAGCTTCTTCGCATTCGGCCTG TTCCGTTCCGCTCAGCGCTCCGGCTATTTTCCGCCCGAGCTCGTCGAGACGTTCGAGCCGGTGATCCAGGAGGAAGGCCG CCACATCCTGTTCTTCGCGAACTGGTTCGGCTGGTACTGGCGCAACCTGTCATGGTGGCGCAGGCCGTGGCTATTCGCGC GCGTCGCCGCGGTATGGGCGTACCTGATCTGGGAGCGGATCGGCATCGCGCGCGGCATCGACGCCGACGGCGTCGCGCGC GACGCGAATTTTCCGGCCAACACGGCGGCAACCGTCGGCAACGCGCTGAACCCGCGCGAGCTGATCGAGCTGTGTCTCGT CGAGAACGCGCGCCGGATGGCCGGCTACGACACACGTCTGCTGCGCCCCACGATCGTGCCGCGGCTCGCGCGGTTCGCGC TGCGCTTCATCAGGAAGTGA
Upstream 100 bases:
>100_bases GAGCCGGCCGGCGGCATGTGCGCCGACGGCCTCGAAAATACGTGATTCATCGAGCTATGCAAAAATCGTCGGCTCCTGAC ATCACGATACCAATCAAGCC
Downstream 100 bases:
>100_bases TCGCGGGCGGCGGCGCGCCTCGCGAGGGGGCATGGCTCGCCGCTTGCCGGCGCCTATCGTCGCTTGTCGCCGCATATGTC GCCTACACCGTCGCCTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSDTLRRKQAADHAMRHWVHQSRGPVPIGSDAHKQMFCNMLLDTHNPYKPAVIDWPALRPDALRRLTSLPIWDIAVQTEG RASVRVATFASTVRDPLLRAALELDAAEEARHKVVLSKLVQAYGIRLAPEPAYPAPKDAEWAWMVTGFSECIDSFFAFGL FRSAQRSGYFPPELVETFEPVIQEEGRHILFFANWFGWYWRNLSWWRRPWLFARVAAVWAYLIWERIGIARGIDADGVAR DANFPANTAATVGNALNPRELIELCLVENARRMAGYDTRLLRPTIVPRLARFALRFIRK
Sequences:
>Translated_299_residues MSDTLRRKQAADHAMRHWVHQSRGPVPIGSDAHKQMFCNMLLDTHNPYKPAVIDWPALRPDALRRLTSLPIWDIAVQTEG RASVRVATFASTVRDPLLRAALELDAAEEARHKVVLSKLVQAYGIRLAPEPAYPAPKDAEWAWMVTGFSECIDSFFAFGL FRSAQRSGYFPPELVETFEPVIQEEGRHILFFANWFGWYWRNLSWWRRPWLFARVAAVWAYLIWERIGIARGIDADGVAR DANFPANTAATVGNALNPRELIELCLVENARRMAGYDTRLLRPTIVPRLARFALRFIRK >Mature_298_residues SDTLRRKQAADHAMRHWVHQSRGPVPIGSDAHKQMFCNMLLDTHNPYKPAVIDWPALRPDALRRLTSLPIWDIAVQTEGR ASVRVATFASTVRDPLLRAALELDAAEEARHKVVLSKLVQAYGIRLAPEPAYPAPKDAEWAWMVTGFSECIDSFFAFGLF RSAQRSGYFPPELVETFEPVIQEEGRHILFFANWFGWYWRNLSWWRRPWLFARVAAVWAYLIWERIGIARGIDADGVARD ANFPANTAATVGNALNPRELIELCLVENARRMAGYDTRLLRPTIVPRLARFALRFIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34267; Mature: 34136
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLRRKQAADHAMRHWVHQSRGPVPIGSDAHKQMFCNMLLDTHNPYKPAVIDWPALRP CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCH DALRRLTSLPIWDIAVQTEGRASVRVATFASTVRDPLLRAALELDAAEEARHKVVLSKLV HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAYGIRLAPEPAYPAPKDAEWAWMVTGFSECIDSFFAFGLFRSAQRSGYFPPELVETFEP HHHCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VIQEEGRHILFFANWFGWYWRNLSWWRRPWLFARVAAVWAYLIWERIGIARGIDADGVAR HHHHCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DANFPANTAATVGNALNPRELIELCLVENARRMAGYDTRLLRPTIVPRLARFALRFIRK CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDTLRRKQAADHAMRHWVHQSRGPVPIGSDAHKQMFCNMLLDTHNPYKPAVIDWPALRP CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCH DALRRLTSLPIWDIAVQTEGRASVRVATFASTVRDPLLRAALELDAAEEARHKVVLSKLV HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAYGIRLAPEPAYPAPKDAEWAWMVTGFSECIDSFFAFGLFRSAQRSGYFPPELVETFEP HHHCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VIQEEGRHILFFANWFGWYWRNLSWWRRPWLFARVAAVWAYLIWERIGIARGIDADGVAR HHHHCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DANFPANTAATVGNALNPRELIELCLVENARRMAGYDTRLLRPTIVPRLARFALRFIRK CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA