Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is yhiD [H]

Identifier: 126446453

GI number: 126446453

Start: 2057520

End: 2058251

Strand: Reverse

Name: yhiD [H]

Synonym: BMA10247_A2126

Alternate gene names: 126446453

Gene position: 2058251-2057520 (Counterclockwise)

Preceding gene: 126447155

Following gene: 126447524

Centisome position: 87.48

GC content: 68.72

Gene sequence:

>732_bases
ATGCGGGCCGCCGCCGTCGAACATGGGAGAGCACGAATGCTGAATAACGTCGAACTCATCATGCGGCTGATGCTCGCGGC
GGCGCTCGGCAGCGTGATCGGCATCGAGCGCGAGCGCCTGTCGTGGGCGGCCGGGCTGCGCACGCACATGCTCGTGTGCG
TCGGCTCGGCGCTCATCATGATCGTGTCGGCGTTCGGCTTCGCCGATGTGCTCGGGCAGGCGCACGTCGATCTCGATCCG
TCGCGGATGGCCGCGCAGGTCGTCTCGGGAATCGGCTTTCTCGGCGCGGGCTCGATCCTGCTGCGCGGCGAGATCGTGCG
TGGGCTGACGACGGCGGCGAGCCTGTGGTCGGTCGCGGCCGTCGGGCTCGCGGTGGGCGGCGGGCTGTACGCGGCGGCGA
TCGCGGCGACGATCATCATTCTCGTGATCCTCGCGGGCATCAAGCCGCTCGAGCGGCGCTACCTGAGCGTGCGCCAGCGC
CGCCATCTCATGCTGCTGGTCGAGCGCGGCACGCTGACGTTCGATTCGCTGCACGCGGCGCTCGGCGTGGACAGCGCGCG
CGTCAAGCGCTTCATTGTCCAGCAGAGCGAGGATTCGGCCGACAGCGACGAAGTGACGATCGCGCTGGGCCGCGTGTCCG
ACGTCGAATACGAGAGCATTTGCGCGCGCTTGAGGCAGTTGCCGGGTGTGAAGGGCTTCAGCGAGCGCAAGGGCGGCTTG
CCGGATGACTGA

Upstream 100 bases:

>100_bases
CGGAAACGGAAACGGGGGCGGACATGACGGATGGCGGCGCGGTTGACGGGGGAAGAAACGCGAGCGCCGCACGCGCGGCG
CCGAGCGGCAAGGATAAAGC

Downstream 100 bases:

>100_bases
CGCACGGGCCTCGTGCGGCGGGCATGAGACAATGCCGCCTTCCTGAAATTGTTCGAAGCCGAATCCGGCGCGCGTGCGGC
GCGCCGCTGAACGATCCATG

Product: MgtC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIMIVSAFGFADVLGQAHVDLDP
SRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAAVGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQR
RHLMLLVERGTLTFDSLHAALGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL
PDD

Sequences:

>Translated_243_residues
MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIMIVSAFGFADVLGQAHVDLDP
SRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAAVGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQR
RHLMLLVERGTLTFDSLHAALGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL
PDD
>Mature_243_residues
MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIMIVSAFGFADVLGQAHVDLDP
SRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAAVGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQR
RHLMLLVERGTLTFDSLHAALGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL
PDD

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=217, Percent_Identity=40.5529953917051, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 25826; Mature: 25826

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVSAFGFADVLGQAHVDLDPSRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQRRHLMLLVERGTLTFDSLHAA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHH
LGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL
HCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHCCCC
PDD
CCC
>Mature Secondary Structure
MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVSAFGFADVLGQAHVDLDPSRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQRRHLMLLVERGTLTFDSLHAA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHH
LGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL
HCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHCCCC
PDD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]