Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
---|---|
Accession | NC_009079 |
Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is yhiD [H]
Identifier: 126446453
GI number: 126446453
Start: 2057520
End: 2058251
Strand: Reverse
Name: yhiD [H]
Synonym: BMA10247_A2126
Alternate gene names: 126446453
Gene position: 2058251-2057520 (Counterclockwise)
Preceding gene: 126447155
Following gene: 126447524
Centisome position: 87.48
GC content: 68.72
Gene sequence:
>732_bases ATGCGGGCCGCCGCCGTCGAACATGGGAGAGCACGAATGCTGAATAACGTCGAACTCATCATGCGGCTGATGCTCGCGGC GGCGCTCGGCAGCGTGATCGGCATCGAGCGCGAGCGCCTGTCGTGGGCGGCCGGGCTGCGCACGCACATGCTCGTGTGCG TCGGCTCGGCGCTCATCATGATCGTGTCGGCGTTCGGCTTCGCCGATGTGCTCGGGCAGGCGCACGTCGATCTCGATCCG TCGCGGATGGCCGCGCAGGTCGTCTCGGGAATCGGCTTTCTCGGCGCGGGCTCGATCCTGCTGCGCGGCGAGATCGTGCG TGGGCTGACGACGGCGGCGAGCCTGTGGTCGGTCGCGGCCGTCGGGCTCGCGGTGGGCGGCGGGCTGTACGCGGCGGCGA TCGCGGCGACGATCATCATTCTCGTGATCCTCGCGGGCATCAAGCCGCTCGAGCGGCGCTACCTGAGCGTGCGCCAGCGC CGCCATCTCATGCTGCTGGTCGAGCGCGGCACGCTGACGTTCGATTCGCTGCACGCGGCGCTCGGCGTGGACAGCGCGCG CGTCAAGCGCTTCATTGTCCAGCAGAGCGAGGATTCGGCCGACAGCGACGAAGTGACGATCGCGCTGGGCCGCGTGTCCG ACGTCGAATACGAGAGCATTTGCGCGCGCTTGAGGCAGTTGCCGGGTGTGAAGGGCTTCAGCGAGCGCAAGGGCGGCTTG CCGGATGACTGA
Upstream 100 bases:
>100_bases CGGAAACGGAAACGGGGGCGGACATGACGGATGGCGGCGCGGTTGACGGGGGAAGAAACGCGAGCGCCGCACGCGCGGCG CCGAGCGGCAAGGATAAAGC
Downstream 100 bases:
>100_bases CGCACGGGCCTCGTGCGGCGGGCATGAGACAATGCCGCCTTCCTGAAATTGTTCGAAGCCGAATCCGGCGCGCGTGCGGC GCGCCGCTGAACGATCCATG
Product: MgtC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIMIVSAFGFADVLGQAHVDLDP SRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAAVGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQR RHLMLLVERGTLTFDSLHAALGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL PDD
Sequences:
>Translated_243_residues MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIMIVSAFGFADVLGQAHVDLDP SRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAAVGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQR RHLMLLVERGTLTFDSLHAALGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL PDD >Mature_243_residues MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIMIVSAFGFADVLGQAHVDLDP SRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAAVGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQR RHLMLLVERGTLTFDSLHAALGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL PDD
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=217, Percent_Identity=40.5529953917051, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 25826; Mature: 25826
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVSAFGFADVLGQAHVDLDPSRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAA HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH VGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQRRHLMLLVERGTLTFDSLHAA HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHH LGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL HCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHCCCC PDD CCC >Mature Secondary Structure MRAAAVEHGRARMLNNVELIMRLMLAAALGSVIGIERERLSWAAGLRTHMLVCVGSALIM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVSAFGFADVLGQAHVDLDPSRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAA HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH VGLAVGGGLYAAAIAATIIILVILAGIKPLERRYLSVRQRRHLMLLVERGTLTFDSLHAA HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHH LGVDSARVKRFIVQQSEDSADSDEVTIALGRVSDVEYESICARLRQLPGVKGFSERKGGL HCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHCCCC PDD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]