Click here to switch to the map view.

The map label for this gene is 126446375

Identifier: 126446375

GI number: 126446375

Start: 1023810

End: 1025423

Strand: Direct

Name: 126446375

Synonym: BMA10247_A1083

Alternate gene names: NA

Gene position: 1023810-1025423 (Clockwise)

Preceding gene: 126445865

Following gene: 126447045

Centisome position: 43.52

GC content: 64.93

Gene sequence:

>1614_bases
ATGGCCGATACACAACAAGCCGACGTCGTCGTCGTAGGCTCGGGCGTCGCGGGCGCGATCGTTGCTCATCAGCTCGCGAT
GGCCGGCAAATCGGTGATCCTGCTCGAAGCCGGCCCGCGGATGCCGCGCTGGGAAATCGTCGAGCGGTTTCGCAACCAGC
CGGACAAGATGGATTTTATGGCGCCGTACCCGTCGAGCCCGTGGGCGCCGCATCCCGAGTACGGCCCGCCGAACGACTAT
CTGGTGCTCAAGGGCGAACACAAGTTCAACTCGCAGTACATTCGCGCGGTGGGCGGCACGACGTGGCACTGGGCCGCCTC
CGCGTGGCGCTTCATCCCGAACGACTTCAAGATGAAGACCGTGTACGGTGTCGGCCGCGACTGGCCGATCCAGTATGACG
ACATCGAGCATGACTACCAGCGGGCCGAGGAGGAACTGGGCGTGTGGGGGCCGGGCGCGGAAGAGGATCTGCTGTCGCCG
CGCAAGCAGCCTTACCCGATGCCGCCGCTGCCGCTGTCCTACAACGAGCGGACGATCAAGACCGCGCTCAACAACCACGA
TCCGAAGTATCACGTCGTGACCGAGCCCGTCGCGCGCAACAGCCGTCCGTACGACGGCCGGCCGACCTGTTGCGGGAACA
ACAACTGCATGCCGATCTGCCCGATCGGCGCGATGTACAACGGCATCGTCCATGTCGAGAAGGCCGAGCAGGCGGGCGCG
AAGCTGATCGAGAACGCGGTCGTCCACAAGCTCGAGGTGGGGCCGCAGAAGAAGATCGTCGCGGCGCGCTATAAAGACCC
GAAGGGCGTCGAGCATCGCGTCGAGGGCAAGTATTTCGTGCTCGCCGCGAACGGCATCGAAACGCCGAAGCTGATGCTGA
TGTCGACGAGCCACGATTTCCCGAACGGCGTGGGCAACAGCTCCGACATGGTCGGCCGCAACCTGATGGACCACCCGGGC
ACGGGCGTGTCGTTCTACGCGAGCGAGAAGCTGTGGCCGGGCCGCGGGCCGCAGGAGATGACCTCGCTGATCGGTTTTCG
CGACGGGGCGTTTCGCGCGACCGAGGCGGCGAAGAAGATCCATCTGTCGAACCTGTCGCGCGTCGACCAGGAGACGCAGA
AGATCTTCAAGACGGGCAAGCTGCTGAAGCCCGCCGAGCTTGATGCGCAGATTCGCGACCGCTCCGCGCGCTACGTGCAG
TTCGACTGCTTCCACGAGATCCTGCCGCAGCCGGAGAACCGCATCGTGCCGAGCCGGACGGCGACCGACGCGATCGGTAT
CCCGCGCCCGGAAATCACGTATGCGATCGACGATTACGTGAAGCGCGGCGCCGCGCACACGCGCGAAGTGTATGCGACGG
CCGCGCAGGTGCTGGGCGGCACCGACGTCGCGTTCAACGACGAATTCGCGCCGAACAACCACATCACCGGCTCGACGATC
ATGGGCGCGGACCCGCGCGATTCGGTCGTCGACAAGGATTGCCGCACGTTCGACCATCCGAACCTGTTCGTCTCGAGCAG
CGCGACGATGCCGACGGTCGGCACGGTGAACGTGACGTTGACGATCGCGGCGCTCGCGCTGCGGATCTCGGACCAGTTGA
AGAAGGAAATCTGA

Upstream 100 bases:

>100_bases
CGTTGATGTTCGGCGTCGTGTCCGACACGCTCGTGATCCGCTCGTACTGCCCCAACAAACCCGGCTTCTGGGCCGATAAA
CCGATCGAGAGGCAAGCCTG

Downstream 100 bases:

>100_bases
TGCTCAAACGAACGCTTTCCTTCATGCTGGCCGGCTGCCTCGCGTTGCCCGGCCTGTCGAGCGCGGCGGACGCCGCTGCT
TCCGGCGCGCCCGCCTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Oxidoreductase; Choline Dehydrogenase; FAD Dependent Oxidoreductase; Gluconate 2-Dehydrogenase; GMC Oxidoreductase Family Protein; 2-Keto-Gluconate Dehydrogenase; GMC Oxidoreductase; GMC Family Oxidoreductase; Dehydrogenase Subunit; GMC Oxidoreductase Family; Glucose Dehydrogenase; Dehydrogenase; Dehydrogenase Large Subunit Protein; Oxidoreductase GMC Family; Flavoprotein Related Choline Dehydrogenase; Choline Dehydrogenase-Like Flavoprotein; 2-Keto-Gluconate Dehydrogenase Subunit; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Dehydrogenase Protein; Glucose Dehydrogenase Subunit Alpha; Oxidoreductase-Like Protein; Dehydrogenase-Like Protein; Choline Dehydrogenase And Flavoproteins-Like Protein; L-Sorbose Dehydrogenase; 2-Keto-Gluconate Dehydrogenase Subunit-Like; Dehydrogluconate Dehydrogenase; Glucoside 3-Dehydrogenase; Glucase Dehydrogenase Subunit Alpha; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Dehydrogenase Subunit-Like Protein; Solbitol Dehydrogenase Large Subunit; Quinoprotein Glucose Dehydrogenase; Flavoproteins Oxidoreductases; Glucose Dehydrogenase Alpha Subunit; Oxidoreductase Chain; Gluconate Dehydrogenase; N-Terminal Membrane-Anchored Dehydrogenase; Oxidoreductase GMC Family Protein; Gluconate Dehydrogenase Subunit; Fad Dependent Oxidoreductase; Gluconate 2-Dehydrogenase Alpha Chain; Dehydrogenase Transmembrane Protein

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MADTQQADVVVVGSGVAGAIVAHQLAMAGKSVILLEAGPRMPRWEIVERFRNQPDKMDFMAPYPSSPWAPHPEYGPPNDY
LVLKGEHKFNSQYIRAVGGTTWHWAASAWRFIPNDFKMKTVYGVGRDWPIQYDDIEHDYQRAEEELGVWGPGAEEDLLSP
RKQPYPMPPLPLSYNERTIKTALNNHDPKYHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGA
KLIENAVVHKLEVGPQKKIVAARYKDPKGVEHRVEGKYFVLAANGIETPKLMLMSTSHDFPNGVGNSSDMVGRNLMDHPG
TGVSFYASEKLWPGRGPQEMTSLIGFRDGAFRATEAAKKIHLSNLSRVDQETQKIFKTGKLLKPAELDAQIRDRSARYVQ
FDCFHEILPQPENRIVPSRTATDAIGIPRPEITYAIDDYVKRGAAHTREVYATAAQVLGGTDVAFNDEFAPNNHITGSTI
MGADPRDSVVDKDCRTFDHPNLFVSSSATMPTVGTVNVTLTIAALALRISDQLKKEI

Sequences:

>Translated_537_residues
MADTQQADVVVVGSGVAGAIVAHQLAMAGKSVILLEAGPRMPRWEIVERFRNQPDKMDFMAPYPSSPWAPHPEYGPPNDY
LVLKGEHKFNSQYIRAVGGTTWHWAASAWRFIPNDFKMKTVYGVGRDWPIQYDDIEHDYQRAEEELGVWGPGAEEDLLSP
RKQPYPMPPLPLSYNERTIKTALNNHDPKYHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGA
KLIENAVVHKLEVGPQKKIVAARYKDPKGVEHRVEGKYFVLAANGIETPKLMLMSTSHDFPNGVGNSSDMVGRNLMDHPG
TGVSFYASEKLWPGRGPQEMTSLIGFRDGAFRATEAAKKIHLSNLSRVDQETQKIFKTGKLLKPAELDAQIRDRSARYVQ
FDCFHEILPQPENRIVPSRTATDAIGIPRPEITYAIDDYVKRGAAHTREVYATAAQVLGGTDVAFNDEFAPNNHITGSTI
MGADPRDSVVDKDCRTFDHPNLFVSSSATMPTVGTVNVTLTIAALALRISDQLKKEI
>Mature_536_residues
ADTQQADVVVVGSGVAGAIVAHQLAMAGKSVILLEAGPRMPRWEIVERFRNQPDKMDFMAPYPSSPWAPHPEYGPPNDYL
VLKGEHKFNSQYIRAVGGTTWHWAASAWRFIPNDFKMKTVYGVGRDWPIQYDDIEHDYQRAEEELGVWGPGAEEDLLSPR
KQPYPMPPLPLSYNERTIKTALNNHDPKYHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGAK
LIENAVVHKLEVGPQKKIVAARYKDPKGVEHRVEGKYFVLAANGIETPKLMLMSTSHDFPNGVGNSSDMVGRNLMDHPGT
GVSFYASEKLWPGRGPQEMTSLIGFRDGAFRATEAAKKIHLSNLSRVDQETQKIFKTGKLLKPAELDAQIRDRSARYVQF
DCFHEILPQPENRIVPSRTATDAIGIPRPEITYAIDDYVKRGAAHTREVYATAAQVLGGTDVAFNDEFAPNNHITGSTIM
GADPRDSVVDKDCRTFDHPNLFVSSSATMPTVGTVNVTLTIAALALRISDQLKKEI

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59529; Mature: 59398

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTQQADVVVVGSGVAGAIVAHQLAMAGKSVILLEAGPRMPRWEIVERFRNQPDKMDFM
CCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEE
APYPSSPWAPHPEYGPPNDYLVLKGEHKFNSQYIRAVGGTTWHWAASAWRFIPNDFKMKT
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEHHHHHHHCCCCCEEEEE
VYGVGRDWPIQYDDIEHDYQRAEEELGVWGPGAEEDLLSPRKQPYPMPPLPLSYNERTIK
EEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHH
TALNNHDPKYHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGA
HHHCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHCCEEEEECHHHHHH
KLIENAVVHKLEVGPQKKIVAARYKDPKGVEHRVEGKYFVLAANGIETPKLMLMSTSHDF
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCC
PNGVGNSSDMVGRNLMDHPGTGVSFYASEKLWPGRGPQEMTSLIGFRDGAFRATEAAKKI
CCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
HLSNLSRVDQETQKIFKTGKLLKPAELDAQIRDRSARYVQFDCFHEILPQPENRIVPSRT
HHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCC
ATDAIGIPRPEITYAIDDYVKRGAAHTREVYATAAQVLGGTDVAFNDEFAPNNHITGSTI
CCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEE
MGADPRDSVVDKDCRTFDHPNLFVSSSATMPTVGTVNVTLTIAALALRISDQLKKEI
ECCCCCCHHHCCHHHCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADTQQADVVVVGSGVAGAIVAHQLAMAGKSVILLEAGPRMPRWEIVERFRNQPDKMDFM
CCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEE
APYPSSPWAPHPEYGPPNDYLVLKGEHKFNSQYIRAVGGTTWHWAASAWRFIPNDFKMKT
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEHHHHHHHCCCCCEEEEE
VYGVGRDWPIQYDDIEHDYQRAEEELGVWGPGAEEDLLSPRKQPYPMPPLPLSYNERTIK
EEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHH
TALNNHDPKYHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGA
HHHCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHCCEEEEECHHHHHH
KLIENAVVHKLEVGPQKKIVAARYKDPKGVEHRVEGKYFVLAANGIETPKLMLMSTSHDF
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCC
PNGVGNSSDMVGRNLMDHPGTGVSFYASEKLWPGRGPQEMTSLIGFRDGAFRATEAAKKI
CCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
HLSNLSRVDQETQKIFKTGKLLKPAELDAQIRDRSARYVQFDCFHEILPQPENRIVPSRT
HHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCC
ATDAIGIPRPEITYAIDDYVKRGAAHTREVYATAAQVLGGTDVAFNDEFAPNNHITGSTI
CCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEE
MGADPRDSVVDKDCRTFDHPNLFVSSSATMPTVGTVNVTLTIAALALRISDQLKKEI
ECCCCCCHHHCCHHHCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA