| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446321
Identifier: 126446321
GI number: 126446321
Start: 2323318
End: 2325951
Strand: Direct
Name: 126446321
Synonym: BMA10247_A2383
Alternate gene names: NA
Gene position: 2323318-2325951 (Clockwise)
Preceding gene: 126445818
Following gene: 126447927
Centisome position: 98.75
GC content: 70.54
Gene sequence:
>2634_bases ATGCTGACTTCCGTCCTCGTCCGACTCGTCGCCTGGTCGGTGCGGCGCCCGATCTGGGTCGTCGTGCTGTCGCTCGTCAT CGCCGCGCTCAGCAGCGTCTACGTCGCGCACCATTTCAAGATCAACACCGACATCAGCAAGCTCGTCGAGAACGACCCGA AATGGGCGGCGCTCGGCCGCGCGATCGACGACGCGTTCCCGCAGCGCAACCAGACGATCCTCGCCGTCGTCGAGGCGCCC GCGCCCGAATTCGCCGGCGCCGCCGCCGACGCGCTCGCCGAGGGCTTGCGCCGCGAGACCGAGGCGGGCCGCATCGGCCA GGTGTCGGAGCCCGCGGGCGGCCCGCTCTTCGAGCACGACGGGCTGCTGTTCCTGCCCGAGCAGGACGTCGCGACGACGA CCGCGCAGCTCGCGAGCGCGCGGCCGCTCATCAACGTGCTTGCGAAAGACCCGAGCATCGCGGGCCTCGCGACGACGCTG TCGACGACGCTCGGCGTGCCGTTGCAATCGGGGCAGGTCAAGCTCTCGGGCATGGCGAAGCTGCTCTCGCGCAGCGCGGC CACCGTCGACGACGTGCTCGCCGGCAAGCCGGCCGCGTTCTCGTGGCGCGCGCTCGTCGATGCCGACGCGGCCCGCGAGC CCGCGCGCGCGTTCGTCACCGTGCAGCCCGTCGTCAACTACGGCGCGCTGAAGGCGGGCGAGCAGGCTTCGCGCACGATC CGCGCGACCGCGCAGGCGCTCAAGCTCGACGAGCGCTTCGGCGCCGCCGTGCGGCTCACGGGCGAGCAGCCGCTCGCCGA CGAGGAATTCGCGTCGGTCCAGGACGGCGCGCTCGTCAACGGCATCGCGACGCTCGCGATCGTGCTCGTGATCCTGTGGA TCGCGCTGCGCTCGAAGCGGATGATCGCGTCCGTGTTCGTCACGCTGTTCGTCGGCCTGGTCGTCACGGCCGCGCTCGGG CTGATGATGGTCGGCTCGCTGAACATGATCTCGGTCGCGTTCATGGTGCTGTTCGTCGGCCTCGGTGTCGATTTCGCGAT CCAGTACGGCGTCAAGTATCGCGAGGAGCGGCACCGCGATCCGAATCTCGACCACGCGCTCGTCGGCGCCGCGCACGCGA TGGGCATGCCGCTCACGCTCGCGACGGCGGCCGTCGCCGCGAGCTTCTTCTCGTTTCTGCCGACCGCGTACCGCGGCGTA TCGGAGCTCGGCCTGATCGCGGGCGTCGGGATGTTCGTCGCGCTCTTCACGACGCTCACGCTGCTGCCCGCGCTGCTCAA GCTGCTCGCACCGCCCGGCGAGCGCAAGCCGCCCGGCTTTCCCCGCCTCGCGCCGGTCGACGACTATCTCGACCATCATC GCAAGCCGATCCTGATCGGCACGCTCGCCGTCGTGATCGGCGCGCTGCCGCTCCTCGCGCATCTGCGTTTCGATTTCAAT CCGCTGCATCTGAAGGATCCGCGCAGCGAATCGATGGCGACGCTGCTCGCGCTGAAGGATTCGCCGGAGGCGTCGGTCAA CGACGTGTCGCTGCTCGCGCCGTCGCTCGCGGCCGCGAACGCCGCCGCGCAGCGCCTCGGCGCGCTGCCCGAAGTCGGCC GCACGACGACGCTGTCGACCTTCATTCCCGACGCGCAGCCGCAAAAGCTCGCGACGATCGCGGCCGCCGCGCGCGGGCTG CTGCCGGCGCTCACGCAGCCGGCCGCCGCGCCCGTGCCCGACGCGCAGCGCGTGGCGGCGCTCAAGCGCGCGTCGAACCT GCTCGAATACGCATCCGAGGACTATCCGGGGCCGGGCGCGGCGGCGGCCAAGCATCTGTCGGAATCGCTCGCGAAGCTCG CCGCCGCCGATGCGGCGACGCGCGAGCGCGCGGAGCACGCGTTCTCCGTGCCGCTGAAGATCGCGCTGAACCAGCTCGCG ATGCTGCTGCAGCCGTCGGAGATCACGCGCGAGAACCTGCCGCCGCAGATCGTGCGCGACTGGATCGCGCCGGACGGCCG CGCGCTCGTGCAGATCTCGCCGAAGGTGGTCAAGGGCGCCGATCCGGGCGACGACGCGATGCTGCGCCGCTTCGCGAAGG CCGTGAAAGCGGCCGATCCGGGCGCGATCGGCGGGCCGATCTCGATCCTGCATTCGGCGGACACGATCATCCGCGCGTTC CTGCAGGCGGCCGCGCTGTCCGTCGTGTCGATCACGGTGCTGCTGTGGATCACGCTGCGCCGCTTCGGCGACGTGCTGCG CACGCTCGTGCCGCTCCTCGTGTCGGGCGTCGTGACGCTCGAGCTGTGCGTGCTGCTCGGGATGCCGCTCAATTTCGCGA ACATCATCGCGCTGCCGCTGATGCTCGGCGTGGGCGTCGCGTTCAAGGTGTATTTCGTGATGGCGTGGCGCGCGGGCCAG ACGGGCCTGCTGCAGTCGAGCCTCACGCACGCGGTGCTGTTCAGCGCCGCGACGACGGCCACCGCGTTCGGCAGCCTGTG GCTGTCGCATCATCCGGGCACGGCAAGCATGGGGCGGCTGCTCGCGCTCGCGCTGTCGTGCACGCTGATCGGCGCCGTCG TGTTCCAGCCCGTGCTGATGGGCAAGCCGCGCACGAAGCGCGTGACGAATCAATCGCAAGGAATCGATGAATAA
Upstream 100 bases:
>100_bases CCGGCTGGATTCACGCGTATCGGAACCCAGCCGACTCCGAAACCCGCGCGCCGGTATACTTGGACACTTTGCCTTTTCGC AGCCCCCAACCCGCCGCCTC
Downstream 100 bases:
>100_bases GATGCGAACCACCGCGTCGGCGCTCGCCGTCTGCCTGCTTGCGAGCGGCTGCGCGACCGGCCCCAACCGGCACCCGGGCG ATCCGCTCGAGCCGATGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: RND Superfamily Exporter; Acriflavin Resistance Plasma Membrane Protein; SecD/SecF Family Protein Export Membrane Protein; RND Efflux Transporter; Efflux Pump RND Superfamily Protein; RND Family Efflux Pump; Exporter Of RND Superfamily; Protein Export Membrane Protein; Transporter Exporter RND Family
Number of amino acids: Translated: 877; Mature: 877
Protein sequence:
>877_residues MLTSVLVRLVAWSVRRPIWVVVLSLVIAALSSVYVAHHFKINTDISKLVENDPKWAALGRAIDDAFPQRNQTILAVVEAP APEFAGAAADALAEGLRRETEAGRIGQVSEPAGGPLFEHDGLLFLPEQDVATTTAQLASARPLINVLAKDPSIAGLATTL STTLGVPLQSGQVKLSGMAKLLSRSAATVDDVLAGKPAAFSWRALVDADAAREPARAFVTVQPVVNYGALKAGEQASRTI RATAQALKLDERFGAAVRLTGEQPLADEEFASVQDGALVNGIATLAIVLVILWIALRSKRMIASVFVTLFVGLVVTAALG LMMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERHRDPNLDHALVGAAHAMGMPLTLATAAVAASFFSFLPTAYRGV SELGLIAGVGMFVALFTTLTLLPALLKLLAPPGERKPPGFPRLAPVDDYLDHHRKPILIGTLAVVIGALPLLAHLRFDFN PLHLKDPRSESMATLLALKDSPEASVNDVSLLAPSLAAANAAAQRLGALPEVGRTTTLSTFIPDAQPQKLATIAAAARGL LPALTQPAAAPVPDAQRVAALKRASNLLEYASEDYPGPGAAAAKHLSESLAKLAAADAATRERAEHAFSVPLKIALNQLA MLLQPSEITRENLPPQIVRDWIAPDGRALVQISPKVVKGADPGDDAMLRRFAKAVKAADPGAIGGPISILHSADTIIRAF LQAAALSVVSITVLLWITLRRFGDVLRTLVPLLVSGVVTLELCVLLGMPLNFANIIALPLMLGVGVAFKVYFVMAWRAGQ TGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGRLLALALSCTLIGAVVFQPVLMGKPRTKRVTNQSQGIDE
Sequences:
>Translated_877_residues MLTSVLVRLVAWSVRRPIWVVVLSLVIAALSSVYVAHHFKINTDISKLVENDPKWAALGRAIDDAFPQRNQTILAVVEAP APEFAGAAADALAEGLRRETEAGRIGQVSEPAGGPLFEHDGLLFLPEQDVATTTAQLASARPLINVLAKDPSIAGLATTL STTLGVPLQSGQVKLSGMAKLLSRSAATVDDVLAGKPAAFSWRALVDADAAREPARAFVTVQPVVNYGALKAGEQASRTI RATAQALKLDERFGAAVRLTGEQPLADEEFASVQDGALVNGIATLAIVLVILWIALRSKRMIASVFVTLFVGLVVTAALG LMMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERHRDPNLDHALVGAAHAMGMPLTLATAAVAASFFSFLPTAYRGV SELGLIAGVGMFVALFTTLTLLPALLKLLAPPGERKPPGFPRLAPVDDYLDHHRKPILIGTLAVVIGALPLLAHLRFDFN PLHLKDPRSESMATLLALKDSPEASVNDVSLLAPSLAAANAAAQRLGALPEVGRTTTLSTFIPDAQPQKLATIAAAARGL LPALTQPAAAPVPDAQRVAALKRASNLLEYASEDYPGPGAAAAKHLSESLAKLAAADAATRERAEHAFSVPLKIALNQLA MLLQPSEITRENLPPQIVRDWIAPDGRALVQISPKVVKGADPGDDAMLRRFAKAVKAADPGAIGGPISILHSADTIIRAF LQAAALSVVSITVLLWITLRRFGDVLRTLVPLLVSGVVTLELCVLLGMPLNFANIIALPLMLGVGVAFKVYFVMAWRAGQ TGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGRLLALALSCTLIGAVVFQPVLMGKPRTKRVTNQSQGIDE >Mature_877_residues MLTSVLVRLVAWSVRRPIWVVVLSLVIAALSSVYVAHHFKINTDISKLVENDPKWAALGRAIDDAFPQRNQTILAVVEAP APEFAGAAADALAEGLRRETEAGRIGQVSEPAGGPLFEHDGLLFLPEQDVATTTAQLASARPLINVLAKDPSIAGLATTL STTLGVPLQSGQVKLSGMAKLLSRSAATVDDVLAGKPAAFSWRALVDADAAREPARAFVTVQPVVNYGALKAGEQASRTI RATAQALKLDERFGAAVRLTGEQPLADEEFASVQDGALVNGIATLAIVLVILWIALRSKRMIASVFVTLFVGLVVTAALG LMMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERHRDPNLDHALVGAAHAMGMPLTLATAAVAASFFSFLPTAYRGV SELGLIAGVGMFVALFTTLTLLPALLKLLAPPGERKPPGFPRLAPVDDYLDHHRKPILIGTLAVVIGALPLLAHLRFDFN PLHLKDPRSESMATLLALKDSPEASVNDVSLLAPSLAAANAAAQRLGALPEVGRTTTLSTFIPDAQPQKLATIAAAARGL LPALTQPAAAPVPDAQRVAALKRASNLLEYASEDYPGPGAAAAKHLSESLAKLAAADAATRERAEHAFSVPLKIALNQLA MLLQPSEITRENLPPQIVRDWIAPDGRALVQISPKVVKGADPGDDAMLRRFAKAVKAADPGAIGGPISILHSADTIIRAF LQAAALSVVSITVLLWITLRRFGDVLRTLVPLLVSGVVTLELCVLLGMPLNFANIIALPLMLGVGVAFKVYFVMAWRAGQ TGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGRLLALALSCTLIGAVVFQPVLMGKPRTKRVTNQSQGIDE
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92442; Mature: 92442
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSVLVRLVAWSVRRPIWVVVLSLVIAALSSVYVAHHFKINTDISKLVENDPKWAALGR CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCHHHHHH AIDDAFPQRNQTILAVVEAPAPEFAGAAADALAEGLRRETEAGRIGQVSEPAGGPLFEHD HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GLLFLPEQDVATTTAQLASARPLINVLAKDPSIAGLATTLSTTLGVPLQSGQVKLSGMAK CEEEECCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHH LLSRSAATVDDVLAGKPAAFSWRALVDADAAREPARAFVTVQPVVNYGALKAGEQASRTI HHHHHHHHHHHHHCCCCCCCHHHHHHCCHHCCCCHHEEEEEHHHHCCCCCCCCHHHHHHH RATAQALKLDERFGAAVRLTGEQPLADEEFASVQDGALVNGIATLAIVLVILWIALRSKR HHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MIASVFVTLFVGLVVTAALGLMMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERHRD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHCCC PNLDHALVGAAHAMGMPLTLATAAVAASFFSFLPTAYRGVSELGLIAGVGMFVALFTTLT CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPALLKLLAPPGERKPPGFPRLAPVDDYLDHHRKPILIGTLAVVIGALPLLAHLRFDFN HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC PLHLKDPRSESMATLLALKDSPEASVNDVSLLAPSLAAANAAAQRLGALPEVGRTTTLST CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FIPDAQPQKLATIAAAARGLLPALTQPAAAPVPDAQRVAALKRASNLLEYASEDYPGPGA HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH AAAKHLSESLAKLAAADAATRERAEHAFSVPLKIALNQLAMLLQPSEITRENLPPQIVRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHH WIAPDGRALVQISPKVVKGADPGDDAMLRRFAKAVKAADPGAIGGPISILHSADTIIRAF HHCCCCCEEEEECCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LQAAALSVVSITVLLWITLRRFGDVLRTLVPLLVSGVVTLELCVLLGMPLNFANIIALPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MLGVGVAFKVYFVMAWRAGQTGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGRL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LALALSCTLIGAVVFQPVLMGKPRTKRVTNQSQGIDE HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MLTSVLVRLVAWSVRRPIWVVVLSLVIAALSSVYVAHHFKINTDISKLVENDPKWAALGR CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCHHHHHH AIDDAFPQRNQTILAVVEAPAPEFAGAAADALAEGLRRETEAGRIGQVSEPAGGPLFEHD HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GLLFLPEQDVATTTAQLASARPLINVLAKDPSIAGLATTLSTTLGVPLQSGQVKLSGMAK CEEEECCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHH LLSRSAATVDDVLAGKPAAFSWRALVDADAAREPARAFVTVQPVVNYGALKAGEQASRTI HHHHHHHHHHHHHCCCCCCCHHHHHHCCHHCCCCHHEEEEEHHHHCCCCCCCCHHHHHHH RATAQALKLDERFGAAVRLTGEQPLADEEFASVQDGALVNGIATLAIVLVILWIALRSKR HHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MIASVFVTLFVGLVVTAALGLMMVGSLNMISVAFMVLFVGLGVDFAIQYGVKYREERHRD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHCCC PNLDHALVGAAHAMGMPLTLATAAVAASFFSFLPTAYRGVSELGLIAGVGMFVALFTTLT CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPALLKLLAPPGERKPPGFPRLAPVDDYLDHHRKPILIGTLAVVIGALPLLAHLRFDFN HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC PLHLKDPRSESMATLLALKDSPEASVNDVSLLAPSLAAANAAAQRLGALPEVGRTTTLST CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FIPDAQPQKLATIAAAARGLLPALTQPAAAPVPDAQRVAALKRASNLLEYASEDYPGPGA HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH AAAKHLSESLAKLAAADAATRERAEHAFSVPLKIALNQLAMLLQPSEITRENLPPQIVRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHH WIAPDGRALVQISPKVVKGADPGDDAMLRRFAKAVKAADPGAIGGPISILHSADTIIRAF HHCCCCCEEEEECCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LQAAALSVVSITVLLWITLRRFGDVLRTLVPLLVSGVVTLELCVLLGMPLNFANIIALPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MLGVGVAFKVYFVMAWRAGQTGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGTASMGRL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LALALSCTLIGAVVFQPVLMGKPRTKRVTNQSQGIDE HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA