Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is yxiE [H]
Identifier: 126446285
GI number: 126446285
Start: 1653657
End: 1654151
Strand: Direct
Name: yxiE [H]
Synonym: BMA10247_A1720
Alternate gene names: 126446285
Gene position: 1653657-1654151 (Clockwise)
Preceding gene: 126445631
Following gene: 126446376
Centisome position: 70.29
GC content: 73.33
Gene sequence:
>495_bases ATGTATTCGATCATTCTTGTCGCGCTCGACGGCAGCCAGACCGCTTCGCATGCGCTCGACGCGGCGCTTGAGCTCGCCGC CGACGCGCACGCGCGGCTCGTGCCCGTCTATGTCGTCGACATGCCGGTGTTCGCGTTCGACACGCCCGGCTACGATCCGT CGATCCTCGTCGACGCGTTTCGCGAGGAAGGCCGGCGCGTGCTCGACGACGCGCAGGCCCGGATGACCCGGCGCGGCGTC GCCGGCGCGCCGCGGCTCGTCGAGGTCGAGCCGCCGGGCGAGGATGTCGCCGAGCGCCTCGAGCGCGCGGCGCGCGAGAT CGGCGCGAGCCTGATCGTGATGGGCACGCACGGCCGGCGCGGCGTTCGCCGGCTGATGCTCGGCAGCGTCGCCGAACGGC TGCTGCGGCACGCCCGCTGCCCGGTGCTGATGATTCCGGCCCGCGGCGCGCCGGCCGCCGACGCGAACGCCACTCATCCG ACGGAGACTGCGTGA
Upstream 100 bases:
>100_bases GCGCGCTTGCGGCGGCAGGCCGGGCGCTGGACCGAGGTCGGCCCGGCCGCGCGATGCGCGGCCGACGGCGGCCGAACGAA ACGGGTGCTGGGAGACAGTC
Downstream 100 bases:
>100_bases TGAAATTCAAGACTTTGCTCGTCCATGTCGACGATAGCCGCCAGAGCGGCGCGCGCACCGAGTTCGCGCTCGACCTCGCG CGGCGCTGGGACGCACACGT
Product: universal stress protein
Products: NA
Alternate protein names: USP YxiE [H]
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MYSIILVALDGSQTASHALDAALELAADAHARLVPVYVVDMPVFAFDTPGYDPSILVDAFREEGRRVLDDAQARMTRRGV AGAPRLVEVEPPGEDVAERLERAAREIGASLIVMGTHGRRGVRRLMLGSVAERLLRHARCPVLMIPARGAPAADANATHP TETA
Sequences:
>Translated_164_residues MYSIILVALDGSQTASHALDAALELAADAHARLVPVYVVDMPVFAFDTPGYDPSILVDAFREEGRRVLDDAQARMTRRGV AGAPRLVEVEPPGEDVAERLERAAREIGASLIVMGTHGRRGVRRLMLGSVAERLLRHARCPVLMIPARGAPAADANATHP TETA >Mature_164_residues MYSIILVALDGSQTASHALDAALELAADAHARLVPVYVVDMPVFAFDTPGYDPSILVDAFREEGRRVLDDAQARMTRRGV AGAPRLVEVEPPGEDVAERLERAAREIGASLIVMGTHGRRGVRRLMLGSVAERLLRHARCPVLMIPARGAPAADANATHP TETA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 17598; Mature: 17598
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSIILVALDGSQTASHALDAALELAADAHARLVPVYVVDMPVFAFDTPGYDPSILVDAF CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEECCCCCCHHHHHHHH REEGRRVLDDAQARMTRRGVAGAPRLVEVEPPGEDVAERLERAAREIGASLIVMGTHGRR HHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHH GVRRLMLGSVAERLLRHARCPVLMIPARGAPAADANATHPTETA HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYSIILVALDGSQTASHALDAALELAADAHARLVPVYVVDMPVFAFDTPGYDPSILVDAF CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEECCCCCCHHHHHHHH REEGRRVLDDAQARMTRRGVAGAPRLVEVEPPGEDVAERLERAAREIGASLIVMGTHGRR HHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHH GVRRLMLGSVAERLLRHARCPVLMIPARGAPAADANATHPTETA HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377 [H]