Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446225
Identifier: 126446225
GI number: 126446225
Start: 1040899
End: 1041162
Strand: Reverse
Name: 126446225
Synonym: BMA10247_A1105
Alternate gene names: NA
Gene position: 1041162-1040899 (Counterclockwise)
Preceding gene: 126447671
Following gene: 126445860
Centisome position: 44.25
GC content: 57.2
Gene sequence:
>264_bases ATGAAGAAGCGCTTTACGGAACAGCAAATCATCGGGTTTCTGAAGGAAGCCGAGGCCGGTATGCCGGTCAAGGAACTGTG CAGGAAGCATGGGTTCAGTGACGCGTCGTTCTACACCTGGCGCGCGAAGTTCGGCGGCATGGAAGTCTCGGAAGCCCGCC GGCTCAAGGGCCTCGAGGTGGAGAATGCCCGACTGAAGAAACTGCTGGCCGAAGCAATGCTCGATATGGAAGCGTTGAAG GTTGTCGTCAAGGGAAAGCCCTGA
Upstream 100 bases:
>100_bases CGTTGCGCGGCATCGCGACGATCTCGAGCTGCTGACCTGCCCCCTACAAACAGGGCCAGCCGGAGTCTAGTAAAGTTCGT TTTCGGAGAAGAAGACGAAC
Downstream 100 bases:
>100_bases GCCCGCAAGCCAAACGCGAAGCAGTGTTGGCGATTCGGGAGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTC GGGCTTTCTCGCAGCGTGCT
Product: IS407A, transposase OrfA
Products: NA
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKKRFTEQQIIGFLKEAEAGMPVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKGLEVENARLKKLLAEAMLDMEALK VVVKGKP
Sequences:
>Translated_87_residues MKKRFTEQQIIGFLKEAEAGMPVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKGLEVENARLKKLLAEAMLDMEALK VVVKGKP >Mature_87_residues MKKRFTEQQIIGFLKEAEAGMPVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKGLEVENARLKKLLAEAMLDMEALK VVVKGKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 9903; Mature: 9903
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRFTEQQIIGFLKEAEAGMPVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKGLEV CCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCCC ENARLKKLLAEAMLDMEALKVVVKGKP CHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKRFTEQQIIGFLKEAEAGMPVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKGLEV CCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCCC ENARLKKLLAEAMLDMEALKVVVKGKP CHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1718819 [H]