Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446221
Identifier: 126446221
GI number: 126446221
Start: 1983509
End: 1984606
Strand: Direct
Name: 126446221
Synonym: BMA10247_A2045
Alternate gene names: NA
Gene position: 1983509-1984606 (Clockwise)
Preceding gene: 126447089
Following gene: 126445589
Centisome position: 84.31
GC content: 67.03
Gene sequence:
>1098_bases ATGAAGTCGCTCTTCGATGCGCCGTCATCCCGTCCGCGCGCACGCGCCGCGCTCACGCTCGGCGCAGCCGCCACGCTGAC CGCTTCGTTCGCCGCGCTGCTCGCGCCCATGAATGCCGACGCGCATGGCGCCGTCGGCTTTCCGATCGCGCGTCAATATC AATGCCGTCTCGAAGGCGGCTACTGGGACCCGCCCAACGGCTCGGCGATCCCGCATGACGATTGCCGCGCCGCCTATCGC GCCGGCAATAATTCGGCTTACCCTTTCACGCAATGGAACGAGGTATCCGCGAACCCGGTCGGCCAGGGCAATGATCTCGC GCAACTGAAGGCCGCCGTGCCCGACGGGTTGCTGTGCGCGGGCGGCGACACGTCGAAGGCGGGGCTCGACAAGGCGCCGG CATCGGTCTGGCGCAAGACGCAACTGACGCCGAACAACGGCCACATCGAGCTTCAGTGGGAAAACACGACGGCGCACAAT CCGGCGCGCATGCGCGTGTTCATCTCGAAGCCGTCATATGATCCGTCACGGCCGCTGCGCTGGGACGATCTGCAGCAGAT CTACGACGCGCCGGCCCCCGCCCCCGTCCCCGCGAACGGCGCGGGGCATCTGCCGGGCTCGATCCAGTCGTTCTACAAGC TCGACGTGACGCTGCCCGCCGGCCGCACCGGCGATGCGGTGCTGTACAGCTACTGGCAGCGCATCGATGCCGGCAATGAG GGCTTCTTCAATTGCAGCGACGTGACGATCGCCGCGGACGAACGCGCGTCGGGCTTCCCGTGGGTCGCGGCGCGCGCGTT CGTCGAGCCGGGCATCGCGCCGCGCGCCGGACAGCAGGTTCGCTTCCGGGTGATGATCAACGATGCGCGCGGCGCGGAAG TCGTCGACGTGCGCCAGCCGATCACACCGTACAACGCCGAGCGCAGCGTATGGGCAAAACAGATCGCCGATCAGGTCAAC GGCCGCTACGGCAACATCGCCAAAATCGGCGTGCGCTCGGGCAACACGATCTATTTCGACGCGACGAACCTCGACGCGAA CAAGGTCTGGCTGCAGCCGAACTACAGCAGCGCGCTTAGCGTCGTCGGCGCGAAGTAG
Upstream 100 bases:
>100_bases CGCATCACATTTCGATATCCAAAACAATCGACGCATCTCACCACACCGCGGAACGCGAACCGTGTCATTTCTCACCTGGA CTCACCTGGAGGAACGCTAC
Downstream 100 bases:
>100_bases CGGGCCGTCGGGCGATGCGCGGCGCGCCTCGGGCGCACGCGTGCATCGCCCCACATAGCGTGCTTGCGGATATTCCCTCG ATATCCGCATTGGGCGACGC
Product: chitin-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKSLFDAPSSRPRARAALTLGAAATLTASFAALLAPMNADAHGAVGFPIARQYQCRLEGGYWDPPNGSAIPHDDCRAAYR AGNNSAYPFTQWNEVSANPVGQGNDLAQLKAAVPDGLLCAGGDTSKAGLDKAPASVWRKTQLTPNNGHIELQWENTTAHN PARMRVFISKPSYDPSRPLRWDDLQQIYDAPAPAPVPANGAGHLPGSIQSFYKLDVTLPAGRTGDAVLYSYWQRIDAGNE GFFNCSDVTIAADERASGFPWVAARAFVEPGIAPRAGQQVRFRVMINDARGAEVVDVRQPITPYNAERSVWAKQIADQVN GRYGNIAKIGVRSGNTIYFDATNLDANKVWLQPNYSSALSVVGAK
Sequences:
>Translated_365_residues MKSLFDAPSSRPRARAALTLGAAATLTASFAALLAPMNADAHGAVGFPIARQYQCRLEGGYWDPPNGSAIPHDDCRAAYR AGNNSAYPFTQWNEVSANPVGQGNDLAQLKAAVPDGLLCAGGDTSKAGLDKAPASVWRKTQLTPNNGHIELQWENTTAHN PARMRVFISKPSYDPSRPLRWDDLQQIYDAPAPAPVPANGAGHLPGSIQSFYKLDVTLPAGRTGDAVLYSYWQRIDAGNE GFFNCSDVTIAADERASGFPWVAARAFVEPGIAPRAGQQVRFRVMINDARGAEVVDVRQPITPYNAERSVWAKQIADQVN GRYGNIAKIGVRSGNTIYFDATNLDANKVWLQPNYSSALSVVGAK >Mature_365_residues MKSLFDAPSSRPRARAALTLGAAATLTASFAALLAPMNADAHGAVGFPIARQYQCRLEGGYWDPPNGSAIPHDDCRAAYR AGNNSAYPFTQWNEVSANPVGQGNDLAQLKAAVPDGLLCAGGDTSKAGLDKAPASVWRKTQLTPNNGHIELQWENTTAHN PARMRVFISKPSYDPSRPLRWDDLQQIYDAPAPAPVPANGAGHLPGSIQSFYKLDVTLPAGRTGDAVLYSYWQRIDAGNE GFFNCSDVTIAADERASGFPWVAARAFVEPGIAPRAGQQVRFRVMINDARGAEVVDVRQPITPYNAERSVWAKQIADQVN GRYGNIAKIGVRSGNTIYFDATNLDANKVWLQPNYSSALSVVGAK
Specific function: Unknown
COG id: COG3397
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39284; Mature: 39284
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLFDAPSSRPRARAALTLGAAATLTASFAALLAPMNADAHGAVGFPIARQYQCRLEGG CCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC YWDPPNGSAIPHDDCRAAYRAGNNSAYPFTQWNEVSANPVGQGNDLAQLKAAVPDGLLCA CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEE GGDTSKAGLDKAPASVWRKTQLTPNNGHIELQWENTTAHNPARMRVFISKPSYDPSRPLR CCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCC WDDLQQIYDAPAPAPVPANGAGHLPGSIQSFYKLDVTLPAGRTGDAVLYSYWQRIDAGNE HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCC GFFNCSDVTIAADERASGFPWVAARAFVEPGIAPRAGQQVRFRVMINDARGAEVVDVRQP CCEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEECCCC ITPYNAERSVWAKQIADQVNGRYGNIAKIGVRSGNTIYFDATNLDANKVWLQPNYSSALS CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCHHHHEE VVGAK EECCC >Mature Secondary Structure MKSLFDAPSSRPRARAALTLGAAATLTASFAALLAPMNADAHGAVGFPIARQYQCRLEGG CCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC YWDPPNGSAIPHDDCRAAYRAGNNSAYPFTQWNEVSANPVGQGNDLAQLKAAVPDGLLCA CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEE GGDTSKAGLDKAPASVWRKTQLTPNNGHIELQWENTTAHNPARMRVFISKPSYDPSRPLR CCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCC WDDLQQIYDAPAPAPVPANGAGHLPGSIQSFYKLDVTLPAGRTGDAVLYSYWQRIDAGNE HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCC GFFNCSDVTIAADERASGFPWVAARAFVEPGIAPRAGQQVRFRVMINDARGAEVVDVRQP CCEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEECCCC ITPYNAERSVWAKQIADQVNGRYGNIAKIGVRSGNTIYFDATNLDANKVWLQPNYSSALS CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCHHHHEE VVGAK EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA