Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is trpD [H]
Identifier: 126446206
GI number: 126446206
Start: 1844049
End: 1845080
Strand: Direct
Name: trpD [H]
Synonym: BMA10247_A1912
Alternate gene names: 126446206
Gene position: 1844049-1845080 (Clockwise)
Preceding gene: 126445618
Following gene: 126447042
Centisome position: 78.38
GC content: 68.22
Gene sequence:
>1032_bases ATGACGATCACTCCCCAGGAAGCGCTGCAGCGCACGATCGAGCACCGCGAGATCTTCCACGACGAGATGCTGCACCTGAT GCGGCTCATCATGCGCGGCGACATGTCGCCCGTGATGGCGGCCGCGATCATCACCGGCCTGCGCGTGAAGAAGGAGACGA TCGGCGAGATCGCCGCCGCCGCGACGGTGATGCGCGAGTTCGCGCGCCGCGTCGAGGTGGAGGACAACGCGAATTTCGTC GACATCGTCGGCACGGGCGGCGACGGCTCGCACACGTTCAACATCTCGACCGCGACGATGTTCGTCGCGGCGGCGGCGGG CGCGAAGGTCGCGAAGCACGGCAACCGCGGCGTGTCGAGCAAATCGGGCAGCGCCGACGTGCTCGAGGCGCTCGGCGTGA ACATCGACCTGCAGCCCGAGCAGGTGGCCGCGTCGATCGCCGAAACGGGGATGGGCTTCATGTTCGCGCCGAACCATCAT CCGGCGATGCGCAACATCGCGCCCGTGCGCCGCGAGCTCGGCGTGCGGACGATCTTCAACATCCTCGGCCCGCTCACCAA CCCGGCGGACGCGCCGAACCAGTTGATGGGCGTGTTCCACCCCGATCTCGTCGGCATCCAGGTGCGCGTGATGCAGCGGC TCGGCGCGCAGCACGTGCTCGTCGTCTACGGCAAGGACGGGATGGACGAGGTGTCGCTCGGCGCGGCGACGCTCGTCGGC GAGCTGCGCGACGGCGAAGTGCGCGAGTACGAGATCCACCCGGAGGACTTCGGGATGCAGATGGTGTCGAACCGCACGCT GAAGGTCGAGAGCGCCGACGAATCCCGCGTGATGCTGCTCGAGGCGCTCGGCAACAAGCCGGGCGTCGCGCGCGAGATCG TCACGCTGAACGCGGGCACCGCGCTTTATTCGGCGGACGTCGCGGGCTCGATCGCCGACGGCATCCAGCTCGCGCGCGAC GCGATCGCAAGCGGGCGCGCACGCGAAAAAGTCGACGAGCTCGTGCGCTTCACGCAGCAGTTCAAGCGCTGA
Upstream 100 bases:
>100_bases AATCGATCCTGTCGGAGCACGGCCACGCGCTCCTCGAGAATTTCCTCAAAGAAGCGCGGCAAGCGGCCGCTCATTCAGCC TGACGACGGCGGACCGAACC
Downstream 100 bases:
>100_bases TCCGGCGCCCCGCGCGCGCCTCAACCGAATCCGAATCGAATCCAGCACACAGGACAGCCCCCATGAGCGACATCCTCGAC AAAATCATCGCCGTCAAGCG
Product: anthranilate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFV DIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHH PAMRNIAPVRRELGVRTIFNILGPLTNPADAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVG ELRDGEVREYEIHPEDFGMQMVSNRTLKVESADESRVMLLEALGNKPGVAREIVTLNAGTALYSADVAGSIADGIQLARD AIASGRAREKVDELVRFTQQFKR
Sequences:
>Translated_343_residues MTITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFV DIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHH PAMRNIAPVRRELGVRTIFNILGPLTNPADAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVG ELRDGEVREYEIHPEDFGMQMVSNRTLKVESADESRVMLLEALGNKPGVAREIVTLNAGTALYSADVAGSIADGIQLARD AIASGRAREKVDELVRFTQQFKR >Mature_342_residues TITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFVD IVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHP AMRNIAPVRRELGVRTIFNILGPLTNPADAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVGE LRDGEVREYEIHPEDFGMQMVSNRTLKVESADESRVMLLEALGNKPGVAREIVTLNAGTALYSADVAGSIADGIQLARDA IASGRAREKVDELVRFTQQFKR
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0547
COG function: function code E; Anthranilate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=283, Percent_Identity=43.8162544169611, Blast_Score=214, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6320561, Length=352, Percent_Identity=26.1363636363636, Blast_Score=120, Evalue=3e-28,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005940 - InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR020072 [H]
Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]
EC number: =2.4.2.18 [H]
Molecular weight: Translated: 37018; Mature: 36887
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ATVMREFARRVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSS HHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHCHHHHHCCCCCCCC KSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAPVRRELGVRTIFN CCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH ILGPLTNPADAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVG HHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH ELRDGEVREYEIHPEDFGMQMVSNRTLKVESADESRVMLLEALGNKPGVAREIVTLNAGT HCCCCCCEEEEECCHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCC ALYSADVAGSIADGIQLARDAIASGRAREKVDELVRFTQQFKR CEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ATVMREFARRVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSS HHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHCHHHHHCCCCCCCC KSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAPVRRELGVRTIFN CCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH ILGPLTNPADAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVG HHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH ELRDGEVREYEIHPEDFGMQMVSNRTLKVESADESRVMLLEALGNKPGVAREIVTLNAGT HCCCCCCEEEEECCHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCC ALYSADVAGSIADGIQLARDAIASGRAREKVDELVRFTQQFKR CEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA