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The map label for this gene is 126446180

Identifier: 126446180

GI number: 126446180

Start: 2116224

End: 2116805

Strand: Reverse

Name: 126446180

Synonym: BMA10247_A2178

Alternate gene names: NA

Gene position: 2116805-2116224 (Counterclockwise)

Preceding gene: 126447594

Following gene: 126447879

Centisome position: 89.97

GC content: 68.73

Gene sequence:

>582_bases
ATGGATGCGCATGAGACGCGCGCGGACGCGCCGCGCAACGGCGACGAGGCGCGCGTGCGCGGCGAAGGCCTCGCGACGCC
GCGCCGCGCGAACACGCAACTGCTGCCGACGCTGATCGACCGCCTGCGCGACGACGCGCCGCAACGGCAGACCGAAGCGC
CCGGCGAATATGCGCTCACGCGCATGCAGATGCGCGGCATCGTCCAGCGTGATCTCGCCTTCCTGCTCAACACGACGAGC
ATCGACGAGCACATCGATCGCGAACGCCATCCGGCCGCCGCCGCCTCGACGCTCAACTTCGGCGTGCCGCCGCTTGCCGG
CGCGTTTCTCGCGTCGTGCCAGTGGGCCGAGGTCGAACGCATCATCCGCCGCGTGATTCTCGATTTCGAGCCGCGGCTGA
TCGCCGAGACGCTCGTCGTCGCGCCGTCGCGGGCCGTCGGCGCGGTCGCGCGCCCGAACGTGCTCGCGTTCGAGGTGCGC
GGCATGATTCGTATGGATCCCTATCCGATCGAATTCATGGTGCAAAGCGCGCTCGATCTCGAAACGAACCAGGTCAACAT
CACCGGCATGCGCGCGAGCTGA

Upstream 100 bases:

>100_bases
GGCCTTTTCGAGCTGCACGCGTGTGAATTCGGCGCGCGCGCCCGTGCGGGCGCCGTGCTCGGCGGCGCGGCGCGCGAAGC
GCGCGGCGGGGAGGCGGCCG

Downstream 100 bases:

>100_bases
CGCGCGGGCCTGAAAAAACGGGGGGACACGGTGGACCCGCAATTGCTCGACTACTACAACCAGGAACTGATCTACATGCG
CGAGCTCGGCGCCGAGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpF; Type VI Secretion System Lysozyme-Related Family

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MDAHETRADAPRNGDEARVRGEGLATPRRANTQLLPTLIDRLRDDAPQRQTEAPGEYALTRMQMRGIVQRDLAFLLNTTS
IDEHIDRERHPAAAASTLNFGVPPLAGAFLASCQWAEVERIIRRVILDFEPRLIAETLVVAPSRAVGAVARPNVLAFEVR
GMIRMDPYPIEFMVQSALDLETNQVNITGMRAS

Sequences:

>Translated_193_residues
MDAHETRADAPRNGDEARVRGEGLATPRRANTQLLPTLIDRLRDDAPQRQTEAPGEYALTRMQMRGIVQRDLAFLLNTTS
IDEHIDRERHPAAAASTLNFGVPPLAGAFLASCQWAEVERIIRRVILDFEPRLIAETLVVAPSRAVGAVARPNVLAFEVR
GMIRMDPYPIEFMVQSALDLETNQVNITGMRAS
>Mature_193_residues
MDAHETRADAPRNGDEARVRGEGLATPRRANTQLLPTLIDRLRDDAPQRQTEAPGEYALTRMQMRGIVQRDLAFLLNTTS
IDEHIDRERHPAAAASTLNFGVPPLAGAFLASCQWAEVERIIRRVILDFEPRLIAETLVVAPSRAVGAVARPNVLAFEVR
GMIRMDPYPIEFMVQSALDLETNQVNITGMRAS

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21439; Mature: 21439

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAHETRADAPRNGDEARVRGEGLATPRRANTQLLPTLIDRLRDDAPQRQTEAPGEYALT
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RMQMRGIVQRDLAFLLNTTSIDEHIDRERHPAAAASTLNFGVPPLAGAFLASCQWAEVER
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
IIRRVILDFEPRLIAETLVVAPSRAVGAVARPNVLAFEVRGMIRMDPYPIEFMVQSALDL
HHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHCC
ETNQVNITGMRAS
CCCEEEEEEECCC
>Mature Secondary Structure
MDAHETRADAPRNGDEARVRGEGLATPRRANTQLLPTLIDRLRDDAPQRQTEAPGEYALT
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RMQMRGIVQRDLAFLLNTTSIDEHIDRERHPAAAASTLNFGVPPLAGAFLASCQWAEVER
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
IIRRVILDFEPRLIAETLVVAPSRAVGAVARPNVLAFEVRGMIRMDPYPIEFMVQSALDL
HHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHCC
ETNQVNITGMRAS
CCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA