Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446139
Identifier: 126446139
GI number: 126446139
Start: 990135
End: 991283
Strand: Reverse
Name: 126446139
Synonym: BMA10247_A1056
Alternate gene names: NA
Gene position: 991283-990135 (Counterclockwise)
Preceding gene: 126446324
Following gene: 126446706
Centisome position: 42.13
GC content: 71.11
Gene sequence:
>1149_bases ATGTCGAAGTCCCCCGCTTTTTGGGAGCCGTATTGCCATCGCTCGGAGGCGGAATTCCATTTGTCGAATTTCGCCGCGCG GGTGCTCGGGCGCCATGCCGGCGTCGTGTTCTTCGACGGCATCGACGCGGCCCGCCTCAAGCAGGCGATTCCCGATGCGC ACGGCGACACGCTGGATCTCGTGGCGGCCGTCGTCAGGCCGCCGCTCATGCCGATCGAGCCTGCCGAGACGCTCGACGCG CTGACGCTCGAGCAGCTCTCGCGCGAATGGGAACGCCGCATCGCGGCAAGCGCGCCGTCGGCGCGGCCGCCCCTGCCGGC GCAAGGCGTCGCGCACGCGCGGCGCTTCATCGACGCGCCCAAGACCGCGTTCGACGCCGCCGCCGTCGGCGATACGTTCG GCGTGCTGGCCGGCGCCGTGTCGATCGTGGCGATCGTCGGCGGCGGCATCGCGCTCGCGCCGGTGCTCGGCGCGGCAGCG GGCGCGGCGTCGCTGCTCCTGCTCGCCGAAGACAGCTCGATGCCGCGCTACGAACTCAAGGGCGACGAGGTGCGCAAGAA AAAGCTCGAGACATCGTGGCATTGCAAACTGGTCGAGACCGTCGGGCCGCTGCTCGTGCTGCCCGAGCTGGCCGTCGGCG GCACACGAGCGCTCGCGTCGCCGCCGAAGGCCGCGCGGCAAGCCGGCGAAGCCGCCGAGGAAACGGCCCAGGCGGCGCAG CGGCTCGCGACGCAACGCCATGCGTTCGACGCATTCAAGCGCGCCTCGCTCGACAATCCGGACCGCGCGGCGCGGCGAAC GGGAATGCACGCGATGCGGACCGAAACGAGCGGCCTCGCGGCCGGCGTGCGTCGCGCGCGGCAAAAGATGCTGGCTGCCC GGCGAGAATTGCTGCTGCTTCGCACCATCGAAGCACCCGCCTATCTCGCCTCGCTCTACGGCGCGGGCGTCCACGGCATG GACCCGCCCGAAGGCGGGTCCCGAAGCACGGACTGGCTGCGGCATCGGATGGACGCGCAGTCGTCCGGCGATCCCGATCA CCCGGCGCATCTGCTGATTCCGCGGCATCCGACCGTCGACGGTTCGAACGGCGCGCCCGCGATGCAGCTTCACGTGGCGG TCGGCCATCGTCCGGAAGCGGCGACATGA
Upstream 100 bases:
>100_bases CATGCGCGGCGGATTATATTGACGCCGCGCGACGCCGATGATTATCGGGTTATCCGACAACGGAATCCTCCTTTACTCGA ATACGGAATACGCGAAGACC
Downstream 100 bases:
>100_bases CGCCTCTCGCGCCGCGCGGCGCCGGCCGCCCGACCGCTCGCGCCGAGCGCCCCGGCGATGACCGCCCGGCGCGCCGCGCC GGGCGGTCATCGCGGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDLVAAVVRPPLMPIEPAETLDA LTLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAPKTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAA GAASLLLLAEDSSMPRYELKGDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTRALASPPKAARQAGEAAEETAQAAQ RLATQRHAFDAFKRASLDNPDRAARRTGMHAMRTETSGLAAGVRRARQKMLAARRELLLLRTIEAPAYLASLYGAGVHGM DPPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPTVDGSNGAPAMQLHVAVGHRPEAAT
Sequences:
>Translated_382_residues MSKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDLVAAVVRPPLMPIEPAETLDA LTLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAPKTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAA GAASLLLLAEDSSMPRYELKGDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTRALASPPKAARQAGEAAEETAQAAQ RLATQRHAFDAFKRASLDNPDRAARRTGMHAMRTETSGLAAGVRRARQKMLAARRELLLLRTIEAPAYLASLYGAGVHGM DPPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPTVDGSNGAPAMQLHVAVGHRPEAAT >Mature_381_residues SKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDLVAAVVRPPLMPIEPAETLDAL TLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAPKTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAAG AASLLLLAEDSSMPRYELKGDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTRALASPPKAARQAGEAAEETAQAAQR LATQRHAFDAFKRASLDNPDRAARRTGMHAMRTETSGLAAGVRRARQKMLAARRELLLLRTIEAPAYLASLYGAGVHGMD PPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPTVDGSNGAPAMQLHVAVGHRPEAAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40554; Mature: 40422
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDL CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCHHHH VAAVVRPPLMPIEPAETLDALTLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAP HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC KTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAAGAASLLLLAEDSSMPRYELK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEECC GDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTRALASPPKAARQAGEAAEETAQAAQ CHHHHHHHCCCHHHEEEHHHHCCHHHHCCHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHH RLATQRHAFDAFKRASLDNPDRAARRTGMHAMRTETSGLAAGVRRARQKMLAARRELLLL HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTIEAPAYLASLYGAGVHGMDPPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPTVD HHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC GSNGAPAMQLHVAVGHRPEAAT CCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure SKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDL CCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCHHHH VAAVVRPPLMPIEPAETLDALTLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAP HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC KTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAAGAASLLLLAEDSSMPRYELK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEECC GDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTRALASPPKAARQAGEAAEETAQAAQ CHHHHHHHCCCHHHEEEHHHHCCHHHHCCHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHH RLATQRHAFDAFKRASLDNPDRAARRTGMHAMRTETSGLAAGVRRARQKMLAARRELLLL HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTIEAPAYLASLYGAGVHGMDPPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPTVD HHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC GSNGAPAMQLHVAVGHRPEAAT CCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA