| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is bsaU
Identifier: 126446053
GI number: 126446053
Start: 690413
End: 691660
Strand: Direct
Name: bsaU
Synonym: BMA10247_A0746
Alternate gene names: NA
Gene position: 690413-691660 (Clockwise)
Preceding gene: 126446571
Following gene: 126447935
Centisome position: 29.35
GC content: 77.88
Gene sequence:
>1248_bases ATGGGTTCAACCATCAGCAATAGCGCGCCGATCGCGCCGATCGTCTCGGGCGTCGAGCCCGCGCAGCAGTCGGACGCGGA GCGGACGTCCGATCTGCAGCGCGCGTATCGCGAGCAATGCCGCGCGGCGCTCGACAAGCGCGACGACGGACGCGACTGCG ACGACACCGAAGCGCAGCGCGCCCACGCGAGGAAAAAGACGAAGCGCAACGGCGAGCCGCCGGGCGCGGCGGGCGGGATG CCCGCGCCGCATGCGGCGCGGGACCGGGCGTTCGCGTTGCGGTTCGGCGGCGCGCGGCTCGGCGAAGCGCGAAGCGGCGC GAACGCGCGGGATGCGCGCGTCGGAGCGGGCGCCGAAGCGGGTATCGAAGCGGGCGTGGAGGTGGGCACCGACGCGCATG CGGCGCGCGGCGGCGCGACGATGCGCGGCCACGCGCCGGCCTCCGGCGCGGTTCGCGCGACTAGCGAACGCGCACCCGCC GCTGCGACGGCCGACGCGCACGCGCCGCAAGCGGCGGCCGAGAGCGCGCCGCCGTCCGTGCCGATGCCGGCGGCGCACGC GGCGCCGCGCACGTCGGGCGGCAGCGCGCGCGATATCGCGGCCGCCGCCGCGCGGATTTGCGCGACGGCGGCGGACCCGG CGGCGGGCGTCGTCGCGTCGCGCTCGCCGGCGTTGCCCGCCGCGCGCGGGCCGGCCTCGGCGACGGCCGCCGCATCGGCC GCGTCGGCTATGTCGGCCATGTCGTCGACACGACGCCCGACGGCCGCCGCTTCGCCGGGCGCCGCGCGCGAACGCGTCGA CGGCGACGGCGACGATTCGAACTGTGCGGGCGACGCGTCGCTCGCCGGCTTGCCGCGCGGCGTTCAACCGCAGGCGTCGC TGCGCGCCGCCGAGCCCGCGGCGCGCGCGCACGACCCGTCGCGCGCCGCGCGCCAACGCGCGCAGGCCGGCGCGGCGCAG GCGGACGCGCGCGATGTCCGGGAAACGCAAGGCACCCAGGTGCGCTACAGCTTCAATTCGTGGGACGGGCGGCCCGCGGT CGAGCTGCGCTTCGATGCCGGCGGCGCGCCGCGCGTCGTCAACGCGCAGCCGAGCCACGACCGCGTGCAGCGCGCGATGG AGCACGGCGCCGATCGGCTGTCGCCCGGATGGACGGTCGAATTCGATCGGTCGCGCGCGGATGATGACAGCGGCGGCCGC TCGCCGTGGCGGCGCGCGCGGCAGGAGCCGGAGGCGGATGAGCGATGA
Upstream 100 bases:
>100_bases CGGCGCAACGCGCATCGCGACTGGCTCGCGCGGCGCAGGATCGAAACCGAGCGGCGGCGCGAATCGGCCGCCGAAGCGGA CATCACGGAAGGAGCAGGTC
Downstream 100 bases:
>100_bases GCGCGCGCTATACGTTGTTCAGGCGCGTCGCGCCCGCGGAATTGCCGCTGTACCGCCGTGCGCGGGCGCTGCGCGCGGCG GGCGAGCACGCCGCGCTGCG
Product: BsaU protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MGSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALDKRDDGRDCDDTEAQRAHARKKTKRNGEPPGAAGGM PAPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEAGIEAGVEVGTDAHAARGGATMRGHAPASGAVRATSERAPA AATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPALPAARGPASATAAASA ASAMSAMSSTRRPTAAASPGAARERVDGDGDDSNCAGDASLAGLPRGVQPQASLRAAEPAARAHDPSRAARQRAQAGAAQ ADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDRSRADDDSGGR SPWRRARQEPEADER
Sequences:
>Translated_415_residues MGSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALDKRDDGRDCDDTEAQRAHARKKTKRNGEPPGAAGGM PAPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEAGIEAGVEVGTDAHAARGGATMRGHAPASGAVRATSERAPA AATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPALPAARGPASATAAASA ASAMSAMSSTRRPTAAASPGAARERVDGDGDDSNCAGDASLAGLPRGVQPQASLRAAEPAARAHDPSRAARQRAQAGAAQ ADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDRSRADDDSGGR SPWRRARQEPEADER >Mature_414_residues GSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALDKRDDGRDCDDTEAQRAHARKKTKRNGEPPGAAGGMP APHAARDRAFALRFGGARLGEARSGANARDARVGAGAEAGIEAGVEVGTDAHAARGGATMRGHAPASGAVRATSERAPAA ATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPALPAARGPASATAAASAA SAMSAMSSTRRPTAAASPGAARERVDGDGDDSNCAGDASLAGLPRGVQPQASLRAAEPAARAHDPSRAARQRAQAGAAQA DARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDRSRADDDSGGRS PWRRARQEPEADER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42281; Mature: 42150
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALDKRDDGRDCDDTEAQR CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AHARKKTKRNGEPPGAAGGMPAPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEA HHHHHHHHCCCCCCCCCCCCCCCCHHHCCEEEEEECCCHHCHHHCCCCCCHHHCCCCCHH GIEAGVEVGTDAHAARGGATMRGHAPASGAVRATSERAPAAATADAHAPQAAAESAPPSV HHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCC PMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPALPAARGPASATAAASA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH ASAMSAMSSTRRPTAAASPGAARERVDGDGDDSNCAGDASLAGLPRGVQPQASLRAAEPA HHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCH ARAHDPSRAARQRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVV HHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEE NAQPSHDRVQRAMEHGADRLSPGWTVEFDRSRADDDSGGRSPWRRARQEPEADER CCCCCHHHHHHHHHHCHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure GSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALDKRDDGRDCDDTEAQR CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AHARKKTKRNGEPPGAAGGMPAPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEA HHHHHHHHCCCCCCCCCCCCCCCCHHHCCEEEEEECCCHHCHHHCCCCCCHHHCCCCCHH GIEAGVEVGTDAHAARGGATMRGHAPASGAVRATSERAPAAATADAHAPQAAAESAPPSV HHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCC PMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPALPAARGPASATAAASA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH ASAMSAMSSTRRPTAAASPGAARERVDGDGDDSNCAGDASLAGLPRGVQPQASLRAAEPA HHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCH ARAHDPSRAARQRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVV HHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEE NAQPSHDRVQRAMEHGADRLSPGWTVEFDRSRADDDSGGRSPWRRARQEPEADER CCCCCHHHHHHHHHHCHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA