Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445983
Identifier: 126445983
GI number: 126445983
Start: 957227
End: 958705
Strand: Direct
Name: 126445983
Synonym: BMA10247_A1015
Alternate gene names: NA
Gene position: 957227-958705 (Clockwise)
Preceding gene: 126446938
Following gene: 126447911
Centisome position: 40.69
GC content: 64.77
Gene sequence:
>1479_bases ATGCGCGCATTCGTCGATATCCGCCAAGCGCGGTGGCGTCGAACGGTGGGCGCGGCGGGCGACGCGCCGGTGCGCGCTTC GCCGCGAGCGAGCGGCGATCGGTCGCCGCAGCGGGCACTCGCAGTCGACCGCGCGCATGGCGCGAGGGCTTTCGTCACGT GCGGCGCGCTTAATTCTTATAATCGGCGGCTATTCCGACGGGCCGCGCGGCGCGATGAAAGCAGACGTCGCCGCGCGACA GGCAAGCATCATGAAAAAAATGCGCGCCGCGGTTTTGGCGAGATGAACAATCAAAACACGATGAACAAATTCAATAACGG GCCGGCTGAATCTCGAAAGAAAACCGATGCGCGTCGCCGCTCCGCAGGCGCGCGCGGTGCGACATCCGCTGCGCGCACAG CGCACGCGCAGCGCGATGCGAAGTGTTCGCCCGATGGTGTCGCAACCGGGCGCGGCGTGACGAGTGCGATGCCGGACGAT TCGGTGCAACTCGGCCGTCCGGCTGCGTCGCAACCTCGGGTCGAGGTCGCAACCGAAGCCGCTTCGGCTTCCGGCGATCC GTCCGATCCGTCCCGCTCGAGCGGCGCGCGCCGATCGCCGCACGCGCTCGATGCGGCCGGCCCGGCGGCGGCGCCGTGCG CCGCCGAACCGCCGCGATCGGCCGCGCCCGGCGCGGCGCGCATGCCGCGCGTGCATCGCGCCTTCACGTCGCTCCAGACC CATTACAAGAAGCTCGACACGGCGCAGAAACTGTATTTGAACTGCGCGCTCGCGTTGCTGCTGTACGGCGTTACCTATCC GTTGCACGCATGGTGGAATTTCGTCGGCCTGGCGCTGCTCTCGCTCGCCTTCTGGTTCGCCGGCATGGTCTGTGACGCGC TGACGCTCTACAAGCGGATCTATGCGACGCACATCGGCAAGGGGCTGCTGTTGCTCGCGTTCACGGGCTTCACCAATTTT GCGATCGCACTGGCGAATCAGCGGATCAACGCGTTCGCGGGCGTCGATCCGTCGAAGTTTCCGCATACGGAGATCTTCGT CGCGATCCTGTCGATCCCGTTCATCGCGCTGTTGATTCTGATGATGCTGTACACGGCGTCGGTGCTGTTCCTGCCGGTCT ATGGCGTGTTCTTCATCGCGATGGACGCGAAGGCGAAGGCGTTCTTCTCGGCCGGGCTGATGAAGCAGGACGACAGCGAA TATCCGGTGATCACCGGAATTTTCCGATTCGTCAGTTTTTTTGTGTTCGCCGGCGTCGTCCTGTTTTTCGCGAAACGGAT GCTGGGCGATTACGACCGTTTCATGACGTCGACGGCGGAGCGTTCGGTCTATCAGCTCGAAATGTACGAGAAGTCGCCGT GCGACGTGCCGGCGGGCGCGCGCGTGGCGTTCCTCGACGACGGCAACATCGTGTACGCGCTGCGCGTCGGCGCCGAGCTG AAGTTTTTCCCGCAGCGGTGCAAGCGCAGCGGGCAGTGA
Upstream 100 bases:
>100_bases GATCGTGTTCGGTGGCGTCGCGCACGATGGCGGAAGAGGTGGGGGCGTCGGTGGCTTTCATCTCGAAAACAAACAGGGCA GGAATGACGAAATCGCTACT
Downstream 100 bases:
>100_bases GCGAGCGGCGGCGCCGCGCGCGCGGCGCTGCCGCTTACGCGCGTTTTCTGAGCGGCGCGTCTTCGACGAGCCACGCGAGC GCGAATGCGATCGCGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MRAFVDIRQARWRRTVGAAGDAPVRASPRASGDRSPQRALAVDRAHGARAFVTCGALNSYNRRLFRRAARRDESRRRRAT GKHHEKNARRGFGEMNNQNTMNKFNNGPAESRKKTDARRRSAGARGATSAARTAHAQRDAKCSPDGVATGRGVTSAMPDD SVQLGRPAASQPRVEVATEAASASGDPSDPSRSSGARRSPHALDAAGPAAAPCAAEPPRSAAPGAARMPRVHRAFTSLQT HYKKLDTAQKLYLNCALALLLYGVTYPLHAWWNFVGLALLSLAFWFAGMVCDALTLYKRIYATHIGKGLLLLAFTGFTNF AIALANQRINAFAGVDPSKFPHTEIFVAILSIPFIALLILMMLYTASVLFLPVYGVFFIAMDAKAKAFFSAGLMKQDDSE YPVITGIFRFVSFFVFAGVVLFFAKRMLGDYDRFMTSTAERSVYQLEMYEKSPCDVPAGARVAFLDDGNIVYALRVGAEL KFFPQRCKRSGQ
Sequences:
>Translated_492_residues MRAFVDIRQARWRRTVGAAGDAPVRASPRASGDRSPQRALAVDRAHGARAFVTCGALNSYNRRLFRRAARRDESRRRRAT GKHHEKNARRGFGEMNNQNTMNKFNNGPAESRKKTDARRRSAGARGATSAARTAHAQRDAKCSPDGVATGRGVTSAMPDD SVQLGRPAASQPRVEVATEAASASGDPSDPSRSSGARRSPHALDAAGPAAAPCAAEPPRSAAPGAARMPRVHRAFTSLQT HYKKLDTAQKLYLNCALALLLYGVTYPLHAWWNFVGLALLSLAFWFAGMVCDALTLYKRIYATHIGKGLLLLAFTGFTNF AIALANQRINAFAGVDPSKFPHTEIFVAILSIPFIALLILMMLYTASVLFLPVYGVFFIAMDAKAKAFFSAGLMKQDDSE YPVITGIFRFVSFFVFAGVVLFFAKRMLGDYDRFMTSTAERSVYQLEMYEKSPCDVPAGARVAFLDDGNIVYALRVGAEL KFFPQRCKRSGQ >Mature_492_residues MRAFVDIRQARWRRTVGAAGDAPVRASPRASGDRSPQRALAVDRAHGARAFVTCGALNSYNRRLFRRAARRDESRRRRAT GKHHEKNARRGFGEMNNQNTMNKFNNGPAESRKKTDARRRSAGARGATSAARTAHAQRDAKCSPDGVATGRGVTSAMPDD SVQLGRPAASQPRVEVATEAASASGDPSDPSRSSGARRSPHALDAAGPAAAPCAAEPPRSAAPGAARMPRVHRAFTSLQT HYKKLDTAQKLYLNCALALLLYGVTYPLHAWWNFVGLALLSLAFWFAGMVCDALTLYKRIYATHIGKGLLLLAFTGFTNF AIALANQRINAFAGVDPSKFPHTEIFVAILSIPFIALLILMMLYTASVLFLPVYGVFFIAMDAKAKAFFSAGLMKQDDSE YPVITGIFRFVSFFVFAGVVLFFAKRMLGDYDRFMTSTAERSVYQLEMYEKSPCDVPAGARVAFLDDGNIVYALRVGAEL KFFPQRCKRSGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53811; Mature: 53811
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAFVDIRQARWRRTVGAAGDAPVRASPRASGDRSPQRALAVDRAHGARAFVTCGALNSY CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHH NRRLFRRAARRDESRRRRATGKHHEKNARRGFGEMNNQNTMNKFNNGPAESRKKTDARRR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHH SAGARGATSAARTAHAQRDAKCSPDGVATGRGVTSAMPDDSVQLGRPAASQPRVEVATEA HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ASASGDPSDPSRSSGARRSPHALDAAGPAAAPCAAEPPRSAAPGAARMPRVHRAFTSLQT HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHH HYKKLDTAQKLYLNCALALLLYGVTYPLHAWWNFVGLALLSLAFWFAGMVCDALTLYKRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATHIGKGLLLLAFTGFTNFAIALANQRINAFAGVDPSKFPHTEIFVAILSIPFIALLIL HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH MMLYTASVLFLPVYGVFFIAMDAKAKAFFSAGLMKQDDSEYPVITGIFRFVSFFVFAGVV HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LFFAKRMLGDYDRFMTSTAERSVYQLEMYEKSPCDVPAGARVAFLDDGNIVYALRVGAEL HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCH KFFPQRCKRSGQ HHHHHHHCCCCC >Mature Secondary Structure MRAFVDIRQARWRRTVGAAGDAPVRASPRASGDRSPQRALAVDRAHGARAFVTCGALNSY CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHH NRRLFRRAARRDESRRRRATGKHHEKNARRGFGEMNNQNTMNKFNNGPAESRKKTDARRR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHH SAGARGATSAARTAHAQRDAKCSPDGVATGRGVTSAMPDDSVQLGRPAASQPRVEVATEA HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ASASGDPSDPSRSSGARRSPHALDAAGPAAAPCAAEPPRSAAPGAARMPRVHRAFTSLQT HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHH HYKKLDTAQKLYLNCALALLLYGVTYPLHAWWNFVGLALLSLAFWFAGMVCDALTLYKRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATHIGKGLLLLAFTGFTNFAIALANQRINAFAGVDPSKFPHTEIFVAILSIPFIALLIL HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH MMLYTASVLFLPVYGVFFIAMDAKAKAFFSAGLMKQDDSEYPVITGIFRFVSFFVFAGVV HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LFFAKRMLGDYDRFMTSTAERSVYQLEMYEKSPCDVPAGARVAFLDDGNIVYALRVGAEL HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCH KFFPQRCKRSGQ HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA