| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126445964
Identifier: 126445964
GI number: 126445964
Start: 798726
End: 799244
Strand: Reverse
Name: 126445964
Synonym: BMA10247_A0850
Alternate gene names: NA
Gene position: 799244-798726 (Counterclockwise)
Preceding gene: 126447318
Following gene: 126447619
Centisome position: 33.97
GC content: 66.47
Gene sequence:
>519_bases ATGACGATTACCCTCATCGAACCTGTCCAGCAGCGCACGGGGATCTATCCGTCGTCCGACCTGAAGGTCGAGGACGGCTA TCCGTCGTCCGACACGTTCCAGATCATTCAGACGCAGGACGGCCGCGGCGCGGGCGTCCGCGTCCTGAAGGCGTTCGCGC GCGGGCGGCGGATGGCGCGCGTGTCCGGGCAGATCACCGCGTTCTGCCGGCTGCACACGCTGCAGATCAACGCGCACACG CACCTGTACGACCCGCATTTCAGCGGGCTGCTGCTGCATTCGTGCGATCCGAACGTGCGGCTCGACATGGCGGGCTTCGA GCTCTGGTCACTGCGCGACATCGCGGCGGGCGAGATGCTGACGATGGATTACGCATCGACCGAGGACGTGCTGATGCGCC AGTTCGAATGCCACTGCGGCGCGCCGAACTGCCGGCGCTGGATCACGGGCGCGAAGGAACTGCCGAACGATAGCGGGCAA ACGCTCCTCGCCGGGTTGCGGGCCGCCGAGATCGCATGA
Upstream 100 bases:
>100_bases GATCCGCCCTTCCCGTCACCCGCGCATTCCGACGCGGCCGCAAAAAAGAGGTCTACCGGGTGCTCCCGCCCGGCGCACGA ACTCAGTCAAGGAGAGCAGC
Downstream 100 bases:
>100_bases CGCGATCGCGGGTGCGCGGGTGCGCAGGTCGCAGGTCGCGGGTCGCTGATCGCTGATCGTGGATCGTGGATCGTGGATCG CGGATCGCGGATCGCGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMARVSGQITAFCRLHTLQINAHT HLYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEMLTMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQ TLLAGLRAAEIA
Sequences:
>Translated_172_residues MTITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMARVSGQITAFCRLHTLQINAHT HLYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEMLTMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQ TLLAGLRAAEIA >Mature_171_residues TITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMARVSGQITAFCRLHTLQINAHTH LYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEMLTMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQT LLAGLRAAEIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19094; Mature: 18963
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS50280 SET ; PS50868 POST_SET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMAR CEEEEECCHHHHCCCCCCCCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEE VSGQITAFCRLHTLQINAHTHLYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEML CCCCEEEEEEEEEEEEECCEEEECCCCCCEEEECCCCCCEEEECCCEEEECCCCCCCCEE TMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQTLLAGLRAAEIA EEECCCHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMAR EEEEECCHHHHCCCCCCCCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEE VSGQITAFCRLHTLQINAHTHLYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEML CCCCEEEEEEEEEEEEECCEEEECCCCCCEEEECCCCCCEEEECCCEEEECCCCCCCCEE TMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQTLLAGLRAAEIA EEECCCHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA