Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is tse [H]
Identifier: 126445947
GI number: 126445947
Start: 2077894
End: 2079522
Strand: Direct
Name: tse [H]
Synonym: BMA10247_A2146
Alternate gene names: 126445947
Gene position: 2077894-2079522 (Clockwise)
Preceding gene: 126447947
Following gene: 126446973
Centisome position: 88.32
GC content: 70.72
Gene sequence:
>1629_bases ATGAAGCTTCGCCGCAAAATTCCCCTCGCCTTCGCGACAGCACTCGTCCTGACGTCCGCGAGCGCGTTCTACGGCATCCA CGCGCTCAACCGCTCGCTCGACACATACGGCACGACGGTTCGGCAGAACGTCGCGAACGAGCGGATGGTGTCCGCGACGC TCGTCGCGTTCAAGCTGCAAGTGCAGGAATGGAAGGACACGCTGCTGCGCGGCAAGGACCCCGCGAAACTCGATAAATAC TGGCGCGCGTTCCAGCAGCGCGAGCAAACCGTCGACGCGCTCGCCGCCGAGCTGAAAGCGAAGCTGCCCGACGGCGAGAG CCGCGGGCTGATCGAGCAGTTCGCCTCCGCGCATGCGGAAATGGGGCAGGGCTATCGTAAGGGATTCGAAGCATTCAGGG CCTCGGGGTTCGACCCGTCCGCGGGCGACCAGGCCGTCGCGGGCGTCGATCGCGCGCCCGCCGTGCTGCTCGAGAAAGCC GCGCGGGACATCGCCGCCGACAGCGCGCGCGTATCGGCCGACGCCGCGAGCGACGCCGCGCACGCGACGGCGATCAGCAT CGCCGCGACGTTCGCCTTGTTCGCGCTCTCGCTCGCCGGCGGCGTGTGGTTCGGCGGCACCGTCACGCGGCCGCTCGAGC GCGCGCTCGCATGCGTGCGGCGAGTGGCCACGGGCGACTTGTCGACGCCGATCGACGCACGCGGCCGCGACGAGATCGCC GAGCTGCTCGCCGCGCTGAAGGACATGCAGGCGAGCCTGTCGCACGTCGTGCGCGACGTGCGGCACAACGCCGACGGCGT CGCCACCGCGAGCGCGCAGATCGCGTCGGGCAATCTCGATCTGTCGTCGCGCACCGAGGAACAGGCGGCATCGCTCGAGG AAACGGCGGCGAGCATGGACGAGCTCACGTCGACCGTGCGCCGCAACGCCGAGCATGCGCAGCATGCGTGCGCGGTGGCC GCCGGCGCATCGACGAAGGCGGCGCGCGGCGGCGACGTGATGCGTCAGGTCGTCGATACGATGCGCGGCATCGCGGACAG CTCGGGCAAGGTCGCCGAGATCATCGCGGTGATCGACGGCATCGCGTTCCAGACCAACATCCTCGCGTTGAATGCGGCCG TCGAGGCCGCGCGCGCGGGCGAACAGGGGCGCGGCTTCGCGGTGGTCGCGGGCGAGGTGCGCACGCTCGCGCAGCGCAGC GCGACGGCGGCGCGCGAAATCAAGACGCTGATCGAGCAGTCGACCGAGCGCGTCGGCGCGGGCTCCGCGCTCGTCGACGA TGCGGGGCGGATCATCGGCGAGATCGTCGATTCGGTGCGGCAGGTGACGGGCATCGTCAGCGAGATCGCAGCGGCATCGA ACGAGCAGAGCGTCGGCATCGAGCAGGTCAATCGCGCGGTCGCGCAAATGGACAACGTCACGCAACAGAACGCGGCGCTC GTCGAGGAAGCGTCCGCGGCGGCGCATGCGCTCGCCGAACAGGCGCACGCGCTGCATGGCGCGGTTGCGGTGTTCTCGCT GCATGGCGAGCGAGCGGGCGAGCGCGGCTGCGCGCATGCCGGGCAGCCGGCCGTCGAAGCGGCGCACGATTCGCCGCGCA CGCCGCTGCCGGTCGTCGCGCCGGCCTGA
Upstream 100 bases:
>100_bases CCGCGGCCATTCGTCTGTTTTAAGGAAGCGGCAAGCCGTGCCGATAACCAGCCATCGTCGAGACGGCGATGCTGCTTACC TCCGCCATTCCAGAGATCCG
Downstream 100 bases:
>100_bases GCGGCGCGGCGCAATCGCCGCGCACGTCGAATCGCGCCCGCGGCAAGCGCGCGCCGGAATCTCCTTCGTGCCGGGTACAT GCGATAGCGCGCGACATCGC
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQVQEWKDTLLRGKDPAKLDKY WRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAEMGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKA ARDIAADSARVSADAASDAAHATAISIAATFALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMDELTSTVRRNAEHAQHACAVA AGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRS ATAAREIKTLIEQSTERVGAGSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL VEEASAAAHALAEQAHALHGAVAVFSLHGERAGERGCAHAGQPAVEAAHDSPRTPLPVVAPA
Sequences:
>Translated_542_residues MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQVQEWKDTLLRGKDPAKLDKY WRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAEMGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKA ARDIAADSARVSADAASDAAHATAISIAATFALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMDELTSTVRRNAEHAQHACAVA AGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRS ATAAREIKTLIEQSTERVGAGSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL VEEASAAAHALAEQAHALHGAVAVFSLHGERAGERGCAHAGQPAVEAAHDSPRTPLPVVAPA >Mature_542_residues MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQVQEWKDTLLRGKDPAKLDKY WRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAEMGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKA ARDIAADSARVSADAASDAAHATAISIAATFALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMDELTSTVRRNAEHAQHACAVA AGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRS ATAAREIKTLIEQSTERVGAGSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL VEEASAAAHALAEQAHALHGAVAVFSLHGERAGERGCAHAGQPAVEAAHDSPRTPLPVVAPA
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI2367378, Length=380, Percent_Identity=53.1578947368421, Blast_Score=321, Evalue=6e-89, Organism=Escherichia coli, GI1787690, Length=378, Percent_Identity=50.2645502645503, Blast_Score=303, Evalue=3e-83, Organism=Escherichia coli, GI1788195, Length=307, Percent_Identity=56.6775244299674, Blast_Score=296, Evalue=2e-81, Organism=Escherichia coli, GI1788194, Length=314, Percent_Identity=54.4585987261147, Blast_Score=296, Evalue=3e-81, Organism=Escherichia coli, GI1789453, Length=317, Percent_Identity=38.801261829653, Blast_Score=204, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR003122 - InterPro: IPR004091 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]
EC number: NA
Molecular weight: Translated: 56552; Mature: 56552
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQ CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQEWKDTLLRGKDPAKLDKYWRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH MGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKAARDIAADSARVSADAASDAA HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHH HATAISIAATFALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMD HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH ELTSTVRRNAEHAQHACAVAAGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSATAAREIKTLIEQSTERVGA HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VEEASAAAHALAEQAHALHGAVAVFSLHGERAGERGCAHAGQPAVEAAHDSPRTPLPVVA HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCC PA CC >Mature Secondary Structure MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQ CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQEWKDTLLRGKDPAKLDKYWRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH MGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKAARDIAADSARVSADAASDAA HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHH HATAISIAATFALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMD HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH ELTSTVRRNAEHAQHACAVAAGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSATAAREIKTLIEQSTERVGA HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VEEASAAAHALAEQAHALHGAVAVFSLHGERAGERGCAHAGQPAVEAAHDSPRTPLPVVA HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCC PA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2496104 [H]