Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445857
Identifier: 126445857
GI number: 126445857
Start: 1178898
End: 1179344
Strand: Reverse
Name: 126445857
Synonym: BMA10247_A1209
Alternate gene names: NA
Gene position: 1179344-1178898 (Counterclockwise)
Preceding gene: 126447282
Following gene: 126446520
Centisome position: 50.13
GC content: 63.09
Gene sequence:
>447_bases TTGGCATCGCGTCGCAACGGTCGAGCGGCGCTGACCAAAGCGCAATTGTTGCCGCTATCGACCGAGAAGATCCGGGCGCT TTCGCTCGAAAATCACCTCGCTCTGTCGGTGGTGCGCGCCGGTGCCGGCGACTTCGAGCAGATGAGTTGCCTGCTTCGCG CGGTCTACCTTGCATATTTCATGCGCAACGAAACGACCGCCGGGATGGACGCCGACGTATATCGGCGGGCCGAAGCGGTG ATGGACCGCTGTATCGGCCGCGTCGAGCGCGGTGAAACCTGGATACTGGAAAGTAACGAGGTTGCTGAGCTCGAACGGGT GCTGGTGTTGCACGATCAACAGCTTGCCGCCGTGCCGCTGCACCGGTATCAGTCGGCGTGGGAGCGCCTGCAGCGTTTTA TCACAAGCGGACAGCGCTCGCCGATCCCGGCCGCGGCAACCGCCTGA
Upstream 100 bases:
>100_bases TTGCGGACTGTTTGGCTGTGGCGCGGCCGCGAGCAATGGCGGCGCCTTTGGCAGTTGCCACGTCGGCACGCGTTTCTGAA GGGATACATCGATGAGCAAA
Downstream 100 bases:
>100_bases CGCTTGCAGTGAATGAAAATTGAAAGGTCGATGATGGAGATGGACAGATAAGAGTTATTATCTGCCCGTCATCGAAATGC ATCTAAACTGGTGATCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MASRRNGRAALTKAQLLPLSTEKIRALSLENHLALSVVRAGAGDFEQMSCLLRAVYLAYFMRNETTAGMDADVYRRAEAV MDRCIGRVERGETWILESNEVAELERVLVLHDQQLAAVPLHRYQSAWERLQRFITSGQRSPIPAAATA
Sequences:
>Translated_148_residues MASRRNGRAALTKAQLLPLSTEKIRALSLENHLALSVVRAGAGDFEQMSCLLRAVYLAYFMRNETTAGMDADVYRRAEAV MDRCIGRVERGETWILESNEVAELERVLVLHDQQLAAVPLHRYQSAWERLQRFITSGQRSPIPAAATA >Mature_147_residues ASRRNGRAALTKAQLLPLSTEKIRALSLENHLALSVVRAGAGDFEQMSCLLRAVYLAYFMRNETTAGMDADVYRRAEAVM DRCIGRVERGETWILESNEVAELERVLVLHDQQLAAVPLHRYQSAWERLQRFITSGQRSPIPAAATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16585; Mature: 16454
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRRNGRAALTKAQLLPLSTEKIRALSLENHLALSVVRAGAGDFEQMSCLLRAVYLAYF CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MRNETTAGMDADVYRRAEAVMDRCIGRVERGETWILESNEVAELERVLVLHDQQLAAVPL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCHHHHHHH HRYQSAWERLQRFITSGQRSPIPAAATA HHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ASRRNGRAALTKAQLLPLSTEKIRALSLENHLALSVVRAGAGDFEQMSCLLRAVYLAYF CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MRNETTAGMDADVYRRAEAVMDRCIGRVERGETWILESNEVAELERVLVLHDQQLAAVPL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCHHHHHHH HRYQSAWERLQRFITSGQRSPIPAAATA HHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA