| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126445695
Identifier: 126445695
GI number: 126445695
Start: 2178834
End: 2180018
Strand: Reverse
Name: 126445695
Synonym: BMA10247_A2239
Alternate gene names: NA
Gene position: 2180018-2178834 (Counterclockwise)
Preceding gene: 126447584
Following gene: 126446004
Centisome position: 92.66
GC content: 72.66
Gene sequence:
>1185_bases ATGACGCTCATCGTCGTGTTTCTGCTGTCTTGCCTGTCGCTCGTGATCTGGCTCGTGCTGCTGTTCGGGCGCGGCGGCTT CTGGCGCGCGCGTGCCGCGCGGCGGCTGCCGCCCGACGCGCGCGGCGCGGCCGCCGGCTGGCCGGCCGTCGCGGCCGTCG TGCCCGCCCGCAACGAGGCGGACGTGATCGGCGAGGCGGTTCGCTCGCTCGTCGAGCAAGCGTACGAAGGCGCGTTTCAC CTGATCGTCGTCGACGACCACAGCACCGACGGCACCGCCGAGGCCGCGCGCGCGGCCGCGGCGGCCGTCGGCTGCGCCGA CCGGCTGACCGTGCTCGCCGCGCAGCCGCTGCCCGCCGGCTGGTCGGGCAAGGTGTGGGCGCAGTCGCAGGGGATCGCCG CGGTGCGCTCGCTCGGGCTGCCCGCCGACTACCTGCTGCTGACGGACGCCGACATCGGTCATCCGCCGGACGCGGTCGCG CAGCTCGTCACGCGCGCGCAGGCGGAGCAGCGCGATCTCGTATCGCTGATGGTGCGGCTGCGCTGCGATTCGTTCTGGGA AAAGGCGCTGATTCCGGCGTTCGTGTTCTTCTTCGCGAAGCTCTACCCGTTCTCGTGGATCAACGATCCGCGCAACCGGA CGGCGGGCGCGGCGGGCGGCTGCATGCTCGTGCGCCGCGACGCGCTCGAGGAGGCGGGCGGCATCGAATCGATCCGCGGC GCGCTGATCGACGATTGCAGCCTGGCCGCGCAGATCAAGCACCGCGGCGCCGGCCGCCACCCGATCCGGCTCGATCTCGC CGATCGCAGCGTGTCGTTGCGGCCGTACGACAGCTGGCGCGACATCTGGAACATGATCGCGCGCACCGCGTTCACGCAGC TGCGGTATTCGCCGGTGCTGCTGCTCGGCACGCTCGTCGGGATGACGATCCTCTACCTGGTGCCGCCCGTCGCCGCGCTC GCGTACGGCGCGCGCGCGTGGCCGGCATGGCTCGCGTGGGCGTCGATGTGCACCGCGTATGCGCCGATGCTCAGCTACTA CCGCCGCTCGCCGTGGTGGGCGCCGGCGCTGCCGCTCGTCGCGCTGTTCTATGTCGGCGCGACGTTCGCGTCGGCCGTGC GCTACTGGCGCGGCAAGGGCGGACAGTGGAAGGCGCGCGTGCAGGCGCCGGTGCGGGATCGTTGA
Upstream 100 bases:
>100_bases GCATGGAAGTCGATCGTAACGAAACGCGCGCGGCGGCGTGCGCGGCCGCCCGGCCGGACGGTGCGCCGGGCGGCCGCGAC GCACGGGCGGAGGGCCGCGC
Downstream 100 bases:
>100_bases GTGTCGGGCGATCGGTTGATCGGCTGATTGGCTGATCGGCGGGCGCCGGCGTTCGCCGGAGAGCGGGGCGGGCCCGCGGC GCGATTCGGTCGCTGTCCCT
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: Glycosyl Transferase; Hopene-Associated Glycosyltransferase HpnB; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase; Integral Membrane Protein; HpnB Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase Protein; TPR Domain-Containing Protein; Glycosyl Transferase Domain-Containing Protein; Squalene-Phytoene Synthase
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAGWPAVAAVVPARNEADVIGEAVRSLVEQAYEGAFH LIVVDDHSTDGTAEAARAAAAAVGCADRLTVLAAQPLPAGWSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDAVA QLVTRAQAEQRDLVSLMVRLRCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESIRG ALIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSPVLLLGTLVGMTILYLVPPVAAL AYGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALPLVALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR
Sequences:
>Translated_394_residues MTLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAGWPAVAAVVPARNEADVIGEAVRSLVEQAYEGAFH LIVVDDHSTDGTAEAARAAAAAVGCADRLTVLAAQPLPAGWSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDAVA QLVTRAQAEQRDLVSLMVRLRCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESIRG ALIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSPVLLLGTLVGMTILYLVPPVAAL AYGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALPLVALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR >Mature_393_residues TLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAGWPAVAAVVPARNEADVIGEAVRSLVEQAYEGAFHL IVVDDHSTDGTAEAARAAAAAVGCADRLTVLAAQPLPAGWSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDAVAQ LVTRAQAEQRDLVSLMVRLRCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESIRGA LIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSPVLLLGTLVGMTILYLVPPVAALA YGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALPLVALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42981; Mature: 42850
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAGWPAVAAVVPARNEA CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCHH DVIGEAVRSLVEQAYEGAFHLIVVDDHSTDGTAEAARAAAAAVGCADRLTVLAAQPLPAG HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCC WSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDAVAQLVTRAQAEQRDLVSLMVRL CCCCEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESIRG HHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH ALIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSPVL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHH LLGTLVGMTILYLVPPVAALAYGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALPLV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure TLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAGWPAVAAVVPARNEA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCHH DVIGEAVRSLVEQAYEGAFHLIVVDDHSTDGTAEAARAAAAAVGCADRLTVLAAQPLPAG HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCC WSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDAVAQLVTRAQAEQRDLVSLMVRL CCCCEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESIRG HHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH ALIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSPVL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHH LLGTLVGMTILYLVPPVAALAYGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALPLV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA