Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445660
Identifier: 126445660
GI number: 126445660
Start: 1773074
End: 1774720
Strand: Direct
Name: 126445660
Synonym: BMA10247_A1843
Alternate gene names: NA
Gene position: 1773074-1774720 (Clockwise)
Preceding gene: 126447302
Following gene: 126446039
Centisome position: 75.36
GC content: 68.97
Gene sequence:
>1647_bases ATGCAACGCTGTCTCGCCCACCCCGCCCGCCTCCTCGCTGCGACGCTGCTGTGCGTCGCGCTCGCCGCCTGCGGCGCCGA CGACACGAACGACAGCGCCGCGCCGCCGCCCGCCCGGCCGAACCCGACGCCCGACGCCCCCGCGTCGACACCCGCCGCCG CGCCCACCTACTACCAGACGAAAACGCCTTATCGGCCGCAGCAGGATGCTTCGCGCTACGAAGCACCGCCCGCGGGCTAT GCGCCCGTCTATACCGAAATGCTCGCGCGCCACGGCTCGCGCGGGCTGTCCGGCTTCAAGTACGACGGCGCGATCTACGA CATGCTGCAAAAGGCGGACGCCGAAGGCGCGCTCACGCCGCTCGGCCGGCAACTGAAGGCCGACACGTTCGCGATGATGA AGGCGAACGCGCTGCTCGGCTACGGCGTCGCGGGCATCTCGACGCCCGGCTACGGCAATCTCACGCAGGCGGGCATTCGC GAACATCAGCAGCTCGCCGCGCGGCTGCTGCAGCGGCTGCCGGCACTGTTCGACACGGTCGCGGGCACGACGGGCGGCGC GGCGCGCAAGATCGTCGTCGTGCATTCCGGGCAGGATCGCGCGGTCGACAGCTCAGCCTACTTCTCGGGCGCGCTCGTCG CCGCGCGCCCCGCGCTCGCGCCGGCGATCACGTCGCCGAGCGCGATCGCCGGCTATCCGCAAGGCGCGCCCGTCGCGCAG GCGGTGGGCGCCAACCGCTTCCTGCTGTACTTCCATGCGCTGAAGCCTTCGGTCGACCTCGTCGTGTCGACAGACGATCC GTATTACGCGACCTATCGCGACAGCCTCGCGTACCAGGCCTACGGCGGCAGCGCCGCCGTCGCCGCGAAGCTCGATGCGA TCATGCGGGCGCCGCGAACGTCGCAGGTCGCGCAAACGGTGCTCGCCGCGCTCGTGACGCCGGGTTTCGCGGCGAAGCTC GGCACGGCGGGCTACACATTCTCGAACACGGGCACGTACACGTTCGCGTCGGCGGACGCGAAGTTCGCCCATACGCTCAA GGGCGACGGCAAGACCACGATCAAGTCCGCCGCCGACGCCGCGAACGTGCTGTACAACCTGCTGCAGGTCGCGCCCGCGA TGACGGCCGAGACGGCCGGCGTCACGATGGAGCGCTACATCGCCGCGCCGCAGGCCGAGTATCTCGCGTATCTTCAGGAC GCCGAGGATTTCTACGAAAAAGGCCCGGGTATCGCCGAGACGAACCCCATCACCTACCGGATGGCGCAGGCGCTCGTCGA CGATTTCTTCGCCGAGATCGACGCGATCGCGCACGGCGATCTGACCAATGCGGCGAAGCTGCGCTTCACGCATGCCGAAG TGGTGATTCCGTTCGCATCGATCCTGAAGCTGAAAGACGTGTTCGCGCCCGTGCCGCAAGCGCAGACGTACACGTACGCG AACAATCCGTGGCGCGGCGAGACGGTGGCGCCGATGGCCGCGAACCTGCAATGGGACGTCTACCGCAACGGCGCGCGGCT CATCGTGAAGATGCTGTACAACGAGCGCGAGACCGATTTCCAGCCCGCGTGCGACGGCGCGCGCATCGCGCCCGGCAGCC GCTTCTACGACTACGCGGGCCTCAGACGCTGCCACGGCTATAGCTGA
Upstream 100 bases:
>100_bases CAAAAACCTTTGCGAGACTGCGCACTCGATTCACCGTCCGCGCAACGCTTCGCCGAGCGGCGGTGCCCTCCGGCCGAACC CACCTCGCCCCTTGCGTTCG
Downstream 100 bases:
>100_bases GCGTCGCCCGCGCGCGGGCGCCAGCCGGTCTCGCGCAACGCATCGACGAGCCGCGCGGCGCCGAGCGCCTCGACGCGCAC GCCGCGCGCCGCGAGATCGG
Product: putative lipoprotein
Products: NA
Alternate protein names: Histidine Acid Phosphatase Family Protein; Lipoprotein
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MQRCLAHPARLLAATLLCVALAACGADDTNDSAAPPPARPNPTPDAPASTPAAAPTYYQTKTPYRPQQDASRYEAPPAGY APVYTEMLARHGSRGLSGFKYDGAIYDMLQKADAEGALTPLGRQLKADTFAMMKANALLGYGVAGISTPGYGNLTQAGIR EHQQLAARLLQRLPALFDTVAGTTGGAARKIVVVHSGQDRAVDSSAYFSGALVAARPALAPAITSPSAIAGYPQGAPVAQ AVGANRFLLYFHALKPSVDLVVSTDDPYYATYRDSLAYQAYGGSAAVAAKLDAIMRAPRTSQVAQTVLAALVTPGFAAKL GTAGYTFSNTGTYTFASADAKFAHTLKGDGKTTIKSAADAANVLYNLLQVAPAMTAETAGVTMERYIAAPQAEYLAYLQD AEDFYEKGPGIAETNPITYRMAQALVDDFFAEIDAIAHGDLTNAAKLRFTHAEVVIPFASILKLKDVFAPVPQAQTYTYA NNPWRGETVAPMAANLQWDVYRNGARLIVKMLYNERETDFQPACDGARIAPGSRFYDYAGLRRCHGYS
Sequences:
>Translated_548_residues MQRCLAHPARLLAATLLCVALAACGADDTNDSAAPPPARPNPTPDAPASTPAAAPTYYQTKTPYRPQQDASRYEAPPAGY APVYTEMLARHGSRGLSGFKYDGAIYDMLQKADAEGALTPLGRQLKADTFAMMKANALLGYGVAGISTPGYGNLTQAGIR EHQQLAARLLQRLPALFDTVAGTTGGAARKIVVVHSGQDRAVDSSAYFSGALVAARPALAPAITSPSAIAGYPQGAPVAQ AVGANRFLLYFHALKPSVDLVVSTDDPYYATYRDSLAYQAYGGSAAVAAKLDAIMRAPRTSQVAQTVLAALVTPGFAAKL GTAGYTFSNTGTYTFASADAKFAHTLKGDGKTTIKSAADAANVLYNLLQVAPAMTAETAGVTMERYIAAPQAEYLAYLQD AEDFYEKGPGIAETNPITYRMAQALVDDFFAEIDAIAHGDLTNAAKLRFTHAEVVIPFASILKLKDVFAPVPQAQTYTYA NNPWRGETVAPMAANLQWDVYRNGARLIVKMLYNERETDFQPACDGARIAPGSRFYDYAGLRRCHGYS >Mature_548_residues MQRCLAHPARLLAATLLCVALAACGADDTNDSAAPPPARPNPTPDAPASTPAAAPTYYQTKTPYRPQQDASRYEAPPAGY APVYTEMLARHGSRGLSGFKYDGAIYDMLQKADAEGALTPLGRQLKADTFAMMKANALLGYGVAGISTPGYGNLTQAGIR EHQQLAARLLQRLPALFDTVAGTTGGAARKIVVVHSGQDRAVDSSAYFSGALVAARPALAPAITSPSAIAGYPQGAPVAQ AVGANRFLLYFHALKPSVDLVVSTDDPYYATYRDSLAYQAYGGSAAVAAKLDAIMRAPRTSQVAQTVLAALVTPGFAAKL GTAGYTFSNTGTYTFASADAKFAHTLKGDGKTTIKSAADAANVLYNLLQVAPAMTAETAGVTMERYIAAPQAEYLAYLQD AEDFYEKGPGIAETNPITYRMAQALVDDFFAEIDAIAHGDLTNAAKLRFTHAEVVIPFASILKLKDVFAPVPQAQTYTYA NNPWRGETVAPMAANLQWDVYRNGARLIVKMLYNERETDFQPACDGARIAPGSRFYDYAGLRRCHGYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58232; Mature: 58232
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRCLAHPARLLAATLLCVALAACGADDTNDSAAPPPARPNPTPDAPASTPAAAPTYYQT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KTPYRPQQDASRYEAPPAGYAPVYTEMLARHGSRGLSGFKYDGAIYDMLQKADAEGALTP CCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCCH LGRQLKADTFAMMKANALLGYGVAGISTPGYGNLTQAGIREHQQLAARLLQRLPALFDTV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTTGGAARKIVVVHSGQDRAVDSSAYFSGALVAARPALAPAITSPSAIAGYPQGAPVAQ CCCCCCCCEEEEEEECCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCCHHCCCCCCCCHHH AVGANRFLLYFHALKPSVDLVVSTDDPYYATYRDSLAYQAYGGSAAVAAKLDAIMRAPRT HHCCCEEEEEEEECCCCEEEEEECCCCCEEEHHHCEEEEECCCCHHHHHHHHHHHHCCCH SQVAQTVLAALVTPGFAAKLGTAGYTFSNTGTYTFASADAKFAHTLKGDGKTTIKSAADA HHHHHHHHHHHHCCCHHHHHCCCCCEECCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHH ANVLYNLLQVAPAMTAETAGVTMERYIAAPQAEYLAYLQDAEDFYEKGPGIAETNPITYR HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH MAQALVDDFFAEIDAIAHGDLTNAAKLRFTHAEVVIPFASILKLKDVFAPVPQAQTYTYA HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC NNPWRGETVAPMAANLQWDVYRNGARLIVKMLYNERETDFQPACDGARIAPGSRFYDYAG CCCCCCCCCCCHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHH LRRCHGYS HHHHCCCC >Mature Secondary Structure MQRCLAHPARLLAATLLCVALAACGADDTNDSAAPPPARPNPTPDAPASTPAAAPTYYQT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KTPYRPQQDASRYEAPPAGYAPVYTEMLARHGSRGLSGFKYDGAIYDMLQKADAEGALTP CCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCCH LGRQLKADTFAMMKANALLGYGVAGISTPGYGNLTQAGIREHQQLAARLLQRLPALFDTV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTTGGAARKIVVVHSGQDRAVDSSAYFSGALVAARPALAPAITSPSAIAGYPQGAPVAQ CCCCCCCCEEEEEEECCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCCHHCCCCCCCCHHH AVGANRFLLYFHALKPSVDLVVSTDDPYYATYRDSLAYQAYGGSAAVAAKLDAIMRAPRT HHCCCEEEEEEEECCCCEEEEEECCCCCEEEHHHCEEEEECCCCHHHHHHHHHHHHCCCH SQVAQTVLAALVTPGFAAKLGTAGYTFSNTGTYTFASADAKFAHTLKGDGKTTIKSAADA HHHHHHHHHHHHCCCHHHHHCCCCCEECCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHH ANVLYNLLQVAPAMTAETAGVTMERYIAAPQAEYLAYLQDAEDFYEKGPGIAETNPITYR HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH MAQALVDDFFAEIDAIAHGDLTNAAKLRFTHAEVVIPFASILKLKDVFAPVPQAQTYTYA HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC NNPWRGETVAPMAANLQWDVYRNGARLIVKMLYNERETDFQPACDGARIAPGSRFYDYAG CCCCCCCCCCCHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHH LRRCHGYS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA