| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is phnW
Identifier: 126445601
GI number: 126445601
Start: 847695
End: 848804
Strand: Reverse
Name: phnW
Synonym: BMA10247_A0895
Alternate gene names: 126445601
Gene position: 848804-847695 (Counterclockwise)
Preceding gene: 126447757
Following gene: 126446546
Centisome position: 36.08
GC content: 72.61
Gene sequence:
>1110_bases ATGCCAGAACGTGATCCCATCCTGTTGACGCCCGGCCCGCTGACGACCTCGCGCATGACGCGCGACGCGATGCTGCGCGA CTGGGGCTCGTGGGACGCCGCTTTCAACCGGCTGACGAAGAGCGTCTGCGCGGATCTCGTGCGGATCGCGGGCGGCGGCG ACGCATATGTGTGCGTGCCGCTGCAAGGCAGCGGCACGTTTGCGGTCGAAGCGACGCTCGGCACGCTCGTGCCGCGCGAC GCCCGCGTGCTCGTGCCGAACAACGGCGCGTACTGCGCGCGGATCGCGGCGATCCTGCGCCGGCTCGGCATCGCGCACGT CGAGCTGCCGTTCGCCGAGGACGAGCCGGCGAGCGCGCACGCGATCGACGCGGCGCTCGCGCGCGACGCGCGCCTCACGC ACGTCGCGCTCGTGCATCTGGAGACGAGCGCCGGCCTGCTGAACCCGCTCGACGACATCGCCGCCGTCTGCCGCGCGCGC GGCAGGGCGCTGATCGTCGACGCGATGAGCTCGTTCGGCGCGCTGCCGATCGCGCTCGCGGCAAGCGGCATCGACGCGCT GATCTCGGCGAGCGGCAAGTGCCTGGAAGGAGTGCCCGGCATGGGCTTCGCGATCGTGCGGCGTTCGGCGCTCGAAGCGG CCGAGGGGCGCTCGCCGTCGGTCGCGCTCGATCTGCACGACCAGTACGCATACATGCAGCGCACGTCGCAATGGCGCTTC ACGCCGCCGACGCACGTGCTCGCCGCGCTGCGCGCCGCGCTCGACCAGTTCTTCGACGAAGGCGGGCAGCCGGCGCGCGG CGCGCGCTACGCGCGGAACTGCGCGACGCTCGTCGACGGCATGCGCGCGCTCGGCTTCGAGCCGTTTCTCGACGCGCGCG CGCAGGCGAGCGTGATCGTCACGTTCTACGCGCCCGCCGATCCCGCGTATGCGTTCCCGGCGTTCTACGCGGCCGTGCGC GACGCGGGCTACGTGCTGTATCCGGGCAAGCTGACGACGGCCGACACGTTTCGCGTCGGCTGCATCGGCGCGCTCGGCGC CGACGAGATGCGCGGCGCGGTGGCGGCGATCGGCGGCGCGCTCGAATCGCTCGGAATCGCGATGCGGTGA
Upstream 100 bases:
>100_bases TCCGTGACGATTGACTTCATTTCCAAAAAACGACACATTTCGCCACTATCCTCCACATCCATCGACCACTGTTCCCGATC TTTTCCGGAGTGACGAAGCC
Downstream 100 bases:
>100_bases CGGGGAAGCAGTGAAGTCGCAAAGGGAAAGCGTGGGCCGCGGCGCGAAGGCGGGAACGACAAGTCGAGCGTTGCGGGCCA CGCCCTGCCGTTATCGGGTG
Product: 2-aminoethylphosphonate--pyruvate transaminase
Products: NA
Alternate protein names: 2-aminoethylphosphonate aminotransferase; AEP transaminase; AEPT
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MPERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVPLQGSGTFAVEATLGTLVPRD ARVLVPNNGAYCARIAAILRRLGIAHVELPFAEDEPASAHAIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRAR GRALIVDAMSSFGALPIALAASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRF TPPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIVTFYAPADPAYAFPAFYAAVR DAGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGALESLGIAMR
Sequences:
>Translated_369_residues MPERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVPLQGSGTFAVEATLGTLVPRD ARVLVPNNGAYCARIAAILRRLGIAHVELPFAEDEPASAHAIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRAR GRALIVDAMSSFGALPIALAASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRF TPPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIVTFYAPADPAYAFPAFYAAVR DAGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGALESLGIAMR >Mature_368_residues PERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVPLQGSGTFAVEATLGTLVPRDA RVLVPNNGAYCARIAAILRRLGIAHVELPFAEDEPASAHAIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRARG RALIVDAMSSFGALPIALAASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRFT PPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIVTFYAPADPAYAFPAFYAAVRD AGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGALESLGIAMR
Specific function: Involved in phosphonate degradation
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
Homologues:
Organism=Homo sapiens, GI4557289, Length=307, Percent_Identity=26.7100977198697, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17536281, Length=306, Percent_Identity=24.1830065359477, Blast_Score=78, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHNW_BURM7 (A3MCV7)
Other databases:
- EMBL: CP000547 - RefSeq: YP_001078093.1 - ProteinModelPortal: A3MCV7 - SMR: A3MCV7 - GeneID: 4889953 - GenomeReviews: CP000547_GR - KEGG: bmn:BMA10247_A0895 - TIGR: BMA10247_A0895 - HOGENOM: HBG423997 - OMA: ITHVAQV - ProtClustDB: PRK13479 - BioCyc: BMAL320389:BMA10247_A0895-MONOMER - HAMAP: MF_01376 - InterPro: IPR017688 - InterPro: IPR000192 - InterPro: IPR012703 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR03301 - TIGRFAMs: TIGR02326
Pfam domain/function: PF00266 Aminotran_5; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.37
Molecular weight: Translated: 38859; Mature: 38728
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVP CCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE LQGSGTFAVEATLGTLVPRDARVLVPNNGAYCARIAAILRRLGIAHVELPFAEDEPASAH ECCCCCEEEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHH AIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRARGRALIVDAMSSFGALPIALA HHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECHHHCCCCHHHHH ASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRF HHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCC TPPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIV CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEE TFYAPADPAYAFPAFYAAVRDAGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGA EEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH LESLGIAMR HHHCCCCCC >Mature Secondary Structure PERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVP CCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE LQGSGTFAVEATLGTLVPRDARVLVPNNGAYCARIAAILRRLGIAHVELPFAEDEPASAH ECCCCCEEEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHH AIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRARGRALIVDAMSSFGALPIALA HHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECHHHCCCCHHHHH ASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRF HHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCC TPPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIV CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEE TFYAPADPAYAFPAFYAAVRDAGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGA EEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH LESLGIAMR HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA