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The map label for this gene is 126445358

Identifier: 126445358

GI number: 126445358

Start: 424398

End: 425546

Strand: Reverse

Name: 126445358

Synonym: BURPS668_A0466

Alternate gene names: NA

Gene position: 425546-424398 (Counterclockwise)

Preceding gene: 126444411

Following gene: 126442577

Centisome position: 13.61

GC content: 66.58

Gene sequence:

>1149_bases
TTGAACAAGAAACTGTTGACCACCGCTATCCTCGCCGCAACCGCGAGCGCGGCACACGCACAAAGCAGCGTGACGCTGTA
CGGCCTCATCGACGCCGGCGTCAGCTACGTGAACCACAGCAAGAGCGCGAGCGGCAGCGACAAGCTCTTCAAGTACGACG
ACGGCATCGCCCAGGGCAGCCGGTGGGGCCTGCGCGGCGCCGAAGACCTCGGCGGCGGCCTGAAGGCGATCTTCGTGCTC
GAAAACGGCTTCAACAGCGGCAACGGCACGATCGGCCAGGGCGGCGCGATCTTCGGCCGCCAGGCCTATGTGGGCCTGTC
GCACAAGGATGCCGGCACGCTGACGTTCGGCCGCCAGTACTCGTTCACGACCGATATCCTCGGCGCGAACTACTCGACGG
GCGGCAACACCGTCGCGGGCAACTACGCGTACCACGTGAACGACATCGACCAGCTCACGTCGAGCCGCATCAACAACGCG
GTGAAGTTCCAGAGCGCGAACTACGCGGGCTTCACGTTCGGCGCGTTGTACGGCTTCTCGAACTCGACGTCGTTCGCGGG
CGCGCCGGCGACGACGACGGGCACCACGACGACGCCCGGCTCGTCGCGCGCGTACAGCTTCGGCCTGAACTACGCGAACG
GCCCGATCGGCCTCGGCGCCGCGTACACCGACATCCGCTATCCGAGCCAGGCGACGCCGGCGTTCACGACCAACATCGCG
AACCTGACGATCAGCAACGTGCGCGATTTGCGCAGCTTCGGCGTCGGCGGCCGCTACATCTGGGGCCCGGCCACCCTCTG
GGCGCTGTGGACGAACACGCGCCTCGAGCCGGTCACGGGCGGCAGCACGACGTACAACGCGTACGAAGCGGGCGGCAAGT
ACGCGTTCACGACGGCGCTGTCGGCGGGCGTCGGCTACACGTACTCGCGCGTGTCGGGCGCGAACTCGGGCCACTGGAAC
CAGGTCAACGGCGCGCTCGACTACGCGCTCAGCAAGCGCACCGACGTGTACCTGCTCGCGATCTACCAGGAAGCGTCGGG
CAAGAACCTGCAGGCGCAGATCGGTTCGAGCACGAGCTACTTCAATACGTCGGGCACGGGTTCGAAGAACCAGTTCGCCG
CGCGCGTCGGTATCCGCCACAAGTTCTGA

Upstream 100 bases:

>100_bases
CATTAAGCGCCCCGTCGATACAGTGCGCTTCCGTTCCCCTTCCAAACGCCTTAAAGAGCGCCGCGGAACCGCAAACATTC
TTACTGCTCGGAGATTTGCC

Downstream 100 bases:

>100_bases
GCATTCGCTCGACAACTCGCGGCACACTACGGCAAAAGCGCCCCGCCTCGTGCGGGGCGTTTTTTTTGCTGCTTTTAAGT
TTCGTTTAATTCTGGGTTGA

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MNKKLLTTAILAATASAAHAQSSVTLYGLIDAGVSYVNHSKSASGSDKLFKYDDGIAQGSRWGLRGAEDLGGGLKAIFVL
ENGFNSGNGTIGQGGAIFGRQAYVGLSHKDAGTLTFGRQYSFTTDILGANYSTGGNTVAGNYAYHVNDIDQLTSSRINNA
VKFQSANYAGFTFGALYGFSNSTSFAGAPATTTGTTTTPGSSRAYSFGLNYANGPIGLGAAYTDIRYPSQATPAFTTNIA
NLTISNVRDLRSFGVGGRYIWGPATLWALWTNTRLEPVTGGSTTYNAYEAGGKYAFTTALSAGVGYTYSRVSGANSGHWN
QVNGALDYALSKRTDVYLLAIYQEASGKNLQAQIGSSTSYFNTSGTGSKNQFAARVGIRHKF

Sequences:

>Translated_382_residues
MNKKLLTTAILAATASAAHAQSSVTLYGLIDAGVSYVNHSKSASGSDKLFKYDDGIAQGSRWGLRGAEDLGGGLKAIFVL
ENGFNSGNGTIGQGGAIFGRQAYVGLSHKDAGTLTFGRQYSFTTDILGANYSTGGNTVAGNYAYHVNDIDQLTSSRINNA
VKFQSANYAGFTFGALYGFSNSTSFAGAPATTTGTTTTPGSSRAYSFGLNYANGPIGLGAAYTDIRYPSQATPAFTTNIA
NLTISNVRDLRSFGVGGRYIWGPATLWALWTNTRLEPVTGGSTTYNAYEAGGKYAFTTALSAGVGYTYSRVSGANSGHWN
QVNGALDYALSKRTDVYLLAIYQEASGKNLQAQIGSSTSYFNTSGTGSKNQFAARVGIRHKF
>Mature_382_residues
MNKKLLTTAILAATASAAHAQSSVTLYGLIDAGVSYVNHSKSASGSDKLFKYDDGIAQGSRWGLRGAEDLGGGLKAIFVL
ENGFNSGNGTIGQGGAIFGRQAYVGLSHKDAGTLTFGRQYSFTTDILGANYSTGGNTVAGNYAYHVNDIDQLTSSRINNA
VKFQSANYAGFTFGALYGFSNSTSFAGAPATTTGTTTTPGSSRAYSFGLNYANGPIGLGAAYTDIRYPSQATPAFTTNIA
NLTISNVRDLRSFGVGGRYIWGPATLWALWTNTRLEPVTGGSTTYNAYEAGGKYAFTTALSAGVGYTYSRVSGANSGHWN
QVNGALDYALSKRTDVYLLAIYQEASGKNLQAQIGSSTSYFNTSGTGSKNQFAARVGIRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40082; Mature: 40082

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLLTTAILAATASAAHAQSSVTLYGLIDAGVSYVNHSKSASGSDKLFKYDDGIAQGS
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
RWGLRGAEDLGGGLKAIFVLENGFNSGNGTIGQGGAIFGRQAYVGLSHKDAGTLTFGRQY
CCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEECCCCCCCEEEECCCC
SFTTDILGANYSTGGNTVAGNYAYHVNDIDQLTSSRINNAVKFQSANYAGFTFGALYGFS
CEEEHCCCCCCCCCCCEEECCEEEEECCHHHHHHHHHCCEEEEECCCCCCEEEEEEECCC
NSTSFAGAPATTTGTTTTPGSSRAYSFGLNYANGPIGLGAAYTDIRYPSQATPAFTTNIA
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCEEEECCCCCCCCCCCEEEEEC
NLTISNVRDLRSFGVGGRYIWGPATLWALWTNTRLEPVTGGSTTYNAYEAGGKYAFTTAL
EEEHHHHHHHHHHCCCCEEEECCEEEEEEEECCEEEECCCCCCCCCHHHCCCCEEEEEEH
SAGVGYTYSRVSGANSGHWNQVNGALDYALSKRTDVYLLAIYQEASGKNLQAQIGSSTSY
HCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCE
FNTSGTGSKNQFAARVGIRHKF
EECCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MNKKLLTTAILAATASAAHAQSSVTLYGLIDAGVSYVNHSKSASGSDKLFKYDDGIAQGS
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
RWGLRGAEDLGGGLKAIFVLENGFNSGNGTIGQGGAIFGRQAYVGLSHKDAGTLTFGRQY
CCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEECCCCCCCEEEECCCC
SFTTDILGANYSTGGNTVAGNYAYHVNDIDQLTSSRINNAVKFQSANYAGFTFGALYGFS
CEEEHCCCCCCCCCCCEEECCEEEEECCHHHHHHHHHCCEEEEECCCCCCEEEEEEECCC
NSTSFAGAPATTTGTTTTPGSSRAYSFGLNYANGPIGLGAAYTDIRYPSQATPAFTTNIA
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCEEEECCCCCCCCCCCEEEEEC
NLTISNVRDLRSFGVGGRYIWGPATLWALWTNTRLEPVTGGSTTYNAYEAGGKYAFTTAL
EEEHHHHHHHHHHCCCCEEEECCEEEEEEEECCEEEECCCCCCCCCHHHCCCCEEEEEEH
SAGVGYTYSRVSGANSGHWNQVNGALDYALSKRTDVYLLAIYQEASGKNLQAQIGSSTSY
HCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCE
FNTSGTGSKNQFAARVGIRHKF
EECCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]