Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
---|---|
Accession | NC_009075 |
Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126445351
Identifier: 126445351
GI number: 126445351
Start: 455956
End: 456789
Strand: Reverse
Name: 126445351
Synonym: BURPS668_A0501
Alternate gene names: NA
Gene position: 456789-455956 (Counterclockwise)
Preceding gene: 126444035
Following gene: 126445055
Centisome position: 14.61
GC content: 73.98
Gene sequence:
>834_bases ATGGAACAACGGTTCGTCCTGCTCGTATTGCTCTGCGCGCTGCTGCACGCGGTATGGAACGCGCTGCTGCACGCGAGCGA AGACCGCGTCGCGCAGCTCGGCACGATGTCGGTTCCGTATCTGCTCGCCGGCGCGGCCGGCGCGCTCGCGCTGCCGCCGC CGCCCGCGCCCGCGTGGCCGTACGTCGCGGCATCCGCGCTCCTCGAGCTCGGCTACTGCGCGGCGCTGCTGCGCGCGTAC CGCAGCGGCGATTTCAGCCGGATCTATCCGATCGCGCGCGGGCTGTCGCCGCTCGCCGTCTGCGCGCTCGCGCTGATCGC GCTCGGCGAGCGGCCGACGCCGTTCGCGCTCGCCGGCATCGCGCTCGTGTCGCTCGGGATCGCGTCGCTCGCGCTCAGGC GCGGCCTGCGGTGGTCCGGCGAAAGCGTGCCCTACGCGCTCGTCACGGGCCTGTTCATCGCCGCGTACTCGGTCGTCGAC GGCCGTGGCGTGCGGCTCGCCGGCGATCCGCTCGCGTACGTCGCATGGGTGTACCTGCTATGGAACGCGCCGCAGTTCGC GCTGATCTGCCGGCTGCGGGGCTGGCGCGCGCTTGCGCGCTCGCGCGCCGCCGTCTCGCGCGGGCTCGCGGCCGGCGTGC TATCGCTCGCCGCGTATGCGATCGCGATCGCCGCGTACCGGCATCTGCCGGTCGCCACCGTGTCCGCGCTGCGCGAGACG AGCTCGATCTTCGCCATCGCGATCGGCTGGTTCGCGCTGCGCGAGCGGCCGAGCGCGCGCCGGCTCGCCGCGTGCGCGCT CGTCGTCGCGGGCGCGATGCTGATCCGGATGTGA
Upstream 100 bases:
>100_bases CCGACGCACGACATCCGGAACACGGCGCGGCAAGCGCTCGCTTCGCGATCGCGGCCCGCCGCCGCCCGCATGCCCCATTC ACGTCTTCCCGCCCGCCTCG
Downstream 100 bases:
>100_bases CGCGGCGCGGCGGCGCGCGGGCGGCACGTCGGAACTCGTGCCGGATGCCCGTCTCCGCGACGATCTGCGTGCGCGTGCTC GACGGATTCGCGATGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Transporter Dme Family; Integral Membrane; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; Transporter DME Family DMT Superfamily; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; Drug/Metabolite Transporter Superfamily Permease; DMT Family Permease; Inner Membrane Protein
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MEQRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWPYVAASALLELGYCAALLRAY RSGDFSRIYPIARGLSPLAVCALALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVD GRGVRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM
Sequences:
>Translated_277_residues MEQRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWPYVAASALLELGYCAALLRAY RSGDFSRIYPIARGLSPLAVCALALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVD GRGVRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM >Mature_277_residues MEQRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWPYVAASALLELGYCAALLRAY RSGDFSRIYPIARGLSPLAVCALALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVD GRGVRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29313; Mature: 29313
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWP CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCH YVAASALLELGYCAALLRAYRSGDFSRIYPIARGLSPLAVCALALIALGERPTPFALAGI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH ALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVDGRGVRLAGDPLAYVAWVYLL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH WNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEQRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWP CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCH YVAASALLELGYCAALLRAYRSGDFSRIYPIARGLSPLAVCALALIALGERPTPFALAGI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH ALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVDGRGVRLAGDPLAYVAWVYLL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH WNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA