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The map label for this gene is ybgL [C]

Identifier: 126444757

GI number: 126444757

Start: 332218

End: 333018

Strand: Reverse

Name: ybgL [C]

Synonym: BURPS668_A0366

Alternate gene names: 126444757

Gene position: 333018-332218 (Counterclockwise)

Preceding gene: 126442484

Following gene: 126443114

Centisome position: 10.65

GC content: 68.91

Gene sequence:

>801_bases
ATGCGCAAGCACAGCGTCGACCTGAATTCCGACATGGGCGAAGGCTTCGGTCCGTGGAAGATCGGCGATGGGGTAGACGA
GGAGATCATGCCGCTCATCAGCTCGGCGAACATCGCAACGGGCTTTCATGCCGGCGACCCGAACATCATCGCGCGCACCG
TGCAGCTCGCGAAGAACGCGGGCGTCGGCGTGGGCGCGCACCCGGGGTTTCGCGATCTCGTCGGCTTCGGCCGCCGCGAC
ATCGGCGAAACGCCGCAGGCGCTCGTCAACGACATCGTGTACCAGCTCGGCGCGCTGCGCGAGTTCGCGCGCTTTCACGG
CGTGAGCGTGCAGCACGTGAAGCCGCACGGCGCGCTCTACATGCGCGCCGCGCGCGACGAGGCGCTGTCGCGGCTGCTCG
TCGAAACGCTGCAGCAGCTCGATCCGGCATTGCGGCTGTACTGCATGGAGGCATCGGTCACGTACCGGATCGCGCGCGAG
CTCGGCCAGCCCGTGGTGCGCGAGTTCTACGCGGACCGCGATTACGGCCGCAACGGCTCGATCGTGTTCACGCGGCGCGC
GGGCCGGCTCGATCCGAGGCAGGTCGCGGACAAGGTGCTGCGCGCGTGCGTCGACGGCCGCGTGGCGACCGTCGACGGCG
AGGACATCGACATCGATTTCGATTCGATCTGCCTGCACAGCGACACCCCGGGCGCGCTCGCGCTCGCGCGGGCGACCCGC
GATGCGCTCACCGCGCACGGCATCCGCATCGCCGCGCCGGCGACGGCCGAGGCCAACGGAATTCGTATCGATGAAGCTTG
A

Upstream 100 bases:

>100_bases
ATAGAACTATTTTGGCGACCGCGCCCGAACTAACCTACGGTCCGACGCGGTCGATGCGCCCTTTCCGGTGCGCGGGCCGG
CAACGAAGGAGACACTCAGC

Downstream 100 bases:

>100_bases
GGAGCCCCACGAGATGGCACAACACGAAATCGTCAGCCCGCTGCCCGGGACGTTCTACCGGCGCCCGTCGCCCGATGCGG
CTCCTTTCGTCGACGTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRKHSVDLNSDMGEGFGPWKIGDGVDEEIMPLISSANIATGFHAGDPNIIARTVQLAKNAGVGVGAHPGFRDLVGFGRRD
IGETPQALVNDIVYQLGALREFARFHGVSVQHVKPHGALYMRAARDEALSRLLVETLQQLDPALRLYCMEASVTYRIARE
LGQPVVREFYADRDYGRNGSIVFTRRAGRLDPRQVADKVLRACVDGRVATVDGEDIDIDFDSICLHSDTPGALALARATR
DALTAHGIRIAAPATAEANGIRIDEA

Sequences:

>Translated_266_residues
MRKHSVDLNSDMGEGFGPWKIGDGVDEEIMPLISSANIATGFHAGDPNIIARTVQLAKNAGVGVGAHPGFRDLVGFGRRD
IGETPQALVNDIVYQLGALREFARFHGVSVQHVKPHGALYMRAARDEALSRLLVETLQQLDPALRLYCMEASVTYRIARE
LGQPVVREFYADRDYGRNGSIVFTRRAGRLDPRQVADKVLRACVDGRVATVDGEDIDIDFDSICLHSDTPGALALARATR
DALTAHGIRIAAPATAEANGIRIDEA
>Mature_266_residues
MRKHSVDLNSDMGEGFGPWKIGDGVDEEIMPLISSANIATGFHAGDPNIIARTVQLAKNAGVGVGAHPGFRDLVGFGRRD
IGETPQALVNDIVYQLGALREFARFHGVSVQHVKPHGALYMRAARDEALSRLLVETLQQLDPALRLYCMEASVTYRIARE
LGQPVVREFYADRDYGRNGSIVFTRRAGRLDPRQVADKVLRACVDGRVATVDGEDIDIDFDSICLHSDTPGALALARATR
DALTAHGIRIAAPATAEANGIRIDEA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=249, Percent_Identity=38.5542168674699, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4198_BURPS (Q63NV1)

Other databases:

- EMBL:   BX571966
- RefSeq:   YP_110218.1
- ProteinModelPortal:   Q63NV1
- SMR:   Q63NV1
- GeneID:   3096371
- GenomeReviews:   BX571966_GR
- KEGG:   bps:BPSS0198
- HOGENOM:   HBG482818
- OMA:   VIREFYA
- PhylomeDB:   Q63NV1
- ProtClustDB:   PRK12569
- BioCyc:   BPSE272560:BPSS0198-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 28868; Mature: 28868

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHSVDLNSDMGEGFGPWKIGDGVDEEIMPLISSANIATGFHAGDPNIIARTVQLAKNA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
GVGVGAHPGFRDLVGFGRRDIGETPQALVNDIVYQLGALREFARFHGVSVQHVKPHGALY
CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEE
MRAARDEALSRLLVETLQQLDPALRLYCMEASVTYRIARELGQPVVREFYADRDYGRNGS
EHHHHHHHHHHHHHHHHHHHCHHHEEEHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCC
IVFTRRAGRLDPRQVADKVLRACVDGRVATVDGEDIDIDFDSICLHSDTPGALALARATR
EEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCEECCHHHEEEECCCCCHHHHHHHHH
DALTAHGIRIAAPATAEANGIRIDEA
HHHHHCCEEEECCCCCCCCCEEECCC
>Mature Secondary Structure
MRKHSVDLNSDMGEGFGPWKIGDGVDEEIMPLISSANIATGFHAGDPNIIARTVQLAKNA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
GVGVGAHPGFRDLVGFGRRDIGETPQALVNDIVYQLGALREFARFHGVSVQHVKPHGALY
CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEE
MRAARDEALSRLLVETLQQLDPALRLYCMEASVTYRIARELGQPVVREFYADRDYGRNGS
EHHHHHHHHHHHHHHHHHHHCHHHEEEHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCC
IVFTRRAGRLDPRQVADKVLRACVDGRVATVDGEDIDIDFDSICLHSDTPGALALARATR
EEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCEECCHHHEEEECCCCCHHHHHHHHH
DALTAHGIRIAAPATAEANGIRIDEA
HHHHHCCEEEECCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA