Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
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Accession | NC_009075 |
Length | 3,127,456 |
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The map label for this gene is 126444676
Identifier: 126444676
GI number: 126444676
Start: 339884
End: 341896
Strand: Reverse
Name: 126444676
Synonym: BURPS668_A0375
Alternate gene names: NA
Gene position: 341896-339884 (Counterclockwise)
Preceding gene: 126445392
Following gene: 126442484
Centisome position: 10.93
GC content: 72.48
Gene sequence:
>2013_bases ATGAACCTTCATCGATCGATCGTCGTTCCCCTCGTTTTCTCCGCCATGTTCCTCGCCGGCTGCGGCAGCTCGGTCGACGG CCGCTTCACGTCCGGCATGGTCGCCATGGGCGCGGTCGCCGGCTCCACCGTCGCCGCGTATCCGATCGGCGCGGACGGCA CAATCGGCGCGCAGCCGCTCGCGGTCACGACAAGCGATGCGTCCGGCGCCTTCTCGCTGCCGGCGCTCGATCGCTGGCCG GCGCTGATCCGCGCGACGCACGGCGCCTATGTCGAGGAAGCGACGGGCGCCGCCGCGACGCTCGAGGGCGACGGCCTCGA AGCCGTGTACGCGAGCGCGCCGTCGACGATCGTCGTCTCGCCATACTCGAGCGCCGTCGTCGCGACCGCACGCGCCGCGG GCGGGCTGACGCAGGCGAACATCGCCGCCGCGATCGCGACGATCTCCGCGTTCGTCGGCGACTTCGATCCGCAACAGACG CGCCCCGCGACGATGGCCGCCGGCGCGGCCGCGCCGGCGATCGAGCCCGGCCACCAGATGGCGCTCGCGCTCGGCGCGGA ATCGCAAAGCCGCACCGACGCCGCGGCCGACATCGCGACGAGCATCGCCGCGATCGTCGCGCAAGCCGCCGCCGGCGACA CGCTCGACACATGCCACGCGGGCGCGGGCGATCCGCGCGCGGACGGCACGCTCGCCGCGCCCGTATCGTCGGGCTGCGCG ATCACGCGCGGCGCGGCGCGATATGCGGCGAACGCGCGCAACACGTCCGGCGTCACGTCGCTTGCGTCGCTATCGGCCAT CCGCACGAGCCGCGCGTCGCCGGACCAGACCGCCGCGGCGACGCCCGACGCCTGCGCGGACCGCGCCGCGTTGCTCGCGC AGAATCTCGCGCTGTTCGACGGCCGGCGCGACGACGTGCAGGCGAATCTCGTCGGCGGCGTCACGCGAGACAACTGGCGC ACGGTGACGACGCGCAGCACATGGGGGCCGACGGCTGCGTTCTACGGCACGCTCGCGACGCCCGCCGCGTGCGCGGACGC CGATACGTTCGCGCGCGAGCTCGTGATCGCCGCGGAAAACTATTGGATCGATCAGGGCATCAACTACTGCCATCACCACA TCCCCGGCTGGACGCCGCCCGACGATTCGGCCGCGGCGGCGCCGCGCTACCGGAATTCGAGCGCGGGCAGCACGTCGGGC GCAAGCAGCAACGGCATGACGTGCACCGCGCAGCGCTCAGGCACGGGCGCGCAGATCGTGCCCGGCACGGCGCCGTCCGC CGGCTTTTCCGCGAGCGAGATCCAGTGGAACGGCGTCGACTGCTCCGACTTCACGTCATGGATCTACAACTTCGTCGGCC TGACCGGCGTGCGGCTGCCCACCGCGATCGGATCGCAGGCGTGCGCGGCGAACGAAGGCGCGGACGCACTACCCACGCCC GGCGTGCTGCTCGATATCGACTCGGGCAACATCGACGCGATGCTGCCCGCCCTGAAGCCCGGCGACCTGCTGTACATCAC GCAGGTCGATCCGCTCGCGTCGGGCAGCGATGCCGGCGGCTACCAGCTCGCGCACGTCGTGACGTGGACGGGCAAACGCT GGAGCGATCTGCAGGCCGGGCCGGACGCCGCGCGCTATGCGCTCGCCCGGCTCGGCCAGCCGGGTTCACGGCTCGGCGGG GATCTCGCGAAGTACCTGCCGCTCGCCGATCTCGCGACGCAGAACCCGTGGATGATCATCGACAGCCATTACGCGGGCCC CGCGTACCGGCCGTTCGTCGGCTGGTATCGACGGAGCCTGTCTAACGTGCGGCGGATCGTCGGCGCCGACGCCGCGCGGC GCGACCCCGCGCTCGCGCCGTACGTGATCGCGCCGATCGCGAGCGACGCGCGCGGCGACACGCTCACCCTCGCGTCGCCG CATGCGAACGCGTCGGCGCAGCAGGGCTGGCGGATGATCTATCGGCAATCGGGCGGCACGCCGTCGTGCGTGCGCGCCGG CATCGCGCAATAG
Upstream 100 bases:
>100_bases CCGGCGCGGCGCGATCCGCCCGTTCGAGCCACACCCACCGCTGCCCGCGCCGTTAACGACTAAAGTCAGACAAGTACCTT CATCCGACACGGGCCGAACC
Downstream 100 bases:
>100_bases CGGCGCGCGGCATACCGCCCGTTCGAGGCCCGCCTCGCGCGTGCGCCGCAGCCGGCCGCCCCGCCGCGGCCGGCCGCCCC GCCGAAACGGGCCGCCGCCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MNLHRSIVVPLVFSAMFLAGCGSSVDGRFTSGMVAMGAVAGSTVAAYPIGADGTIGAQPLAVTTSDASGAFSLPALDRWP ALIRATHGAYVEEATGAAATLEGDGLEAVYASAPSTIVVSPYSSAVVATARAAGGLTQANIAAAIATISAFVGDFDPQQT RPATMAAGAAAPAIEPGHQMALALGAESQSRTDAAADIATSIAAIVAQAAAGDTLDTCHAGAGDPRADGTLAAPVSSGCA ITRGAARYAANARNTSGVTSLASLSAIRTSRASPDQTAAATPDACADRAALLAQNLALFDGRRDDVQANLVGGVTRDNWR TVTTRSTWGPTAAFYGTLATPAACADADTFARELVIAAENYWIDQGINYCHHHIPGWTPPDDSAAAAPRYRNSSAGSTSG ASSNGMTCTAQRSGTGAQIVPGTAPSAGFSASEIQWNGVDCSDFTSWIYNFVGLTGVRLPTAIGSQACAANEGADALPTP GVLLDIDSGNIDAMLPALKPGDLLYITQVDPLASGSDAGGYQLAHVVTWTGKRWSDLQAGPDAARYALARLGQPGSRLGG DLAKYLPLADLATQNPWMIIDSHYAGPAYRPFVGWYRRSLSNVRRIVGADAARRDPALAPYVIAPIASDARGDTLTLASP HANASAQQGWRMIYRQSGGTPSCVRAGIAQ
Sequences:
>Translated_670_residues MNLHRSIVVPLVFSAMFLAGCGSSVDGRFTSGMVAMGAVAGSTVAAYPIGADGTIGAQPLAVTTSDASGAFSLPALDRWP ALIRATHGAYVEEATGAAATLEGDGLEAVYASAPSTIVVSPYSSAVVATARAAGGLTQANIAAAIATISAFVGDFDPQQT RPATMAAGAAAPAIEPGHQMALALGAESQSRTDAAADIATSIAAIVAQAAAGDTLDTCHAGAGDPRADGTLAAPVSSGCA ITRGAARYAANARNTSGVTSLASLSAIRTSRASPDQTAAATPDACADRAALLAQNLALFDGRRDDVQANLVGGVTRDNWR TVTTRSTWGPTAAFYGTLATPAACADADTFARELVIAAENYWIDQGINYCHHHIPGWTPPDDSAAAAPRYRNSSAGSTSG ASSNGMTCTAQRSGTGAQIVPGTAPSAGFSASEIQWNGVDCSDFTSWIYNFVGLTGVRLPTAIGSQACAANEGADALPTP GVLLDIDSGNIDAMLPALKPGDLLYITQVDPLASGSDAGGYQLAHVVTWTGKRWSDLQAGPDAARYALARLGQPGSRLGG DLAKYLPLADLATQNPWMIIDSHYAGPAYRPFVGWYRRSLSNVRRIVGADAARRDPALAPYVIAPIASDARGDTLTLASP HANASAQQGWRMIYRQSGGTPSCVRAGIAQ >Mature_670_residues MNLHRSIVVPLVFSAMFLAGCGSSVDGRFTSGMVAMGAVAGSTVAAYPIGADGTIGAQPLAVTTSDASGAFSLPALDRWP ALIRATHGAYVEEATGAAATLEGDGLEAVYASAPSTIVVSPYSSAVVATARAAGGLTQANIAAAIATISAFVGDFDPQQT RPATMAAGAAAPAIEPGHQMALALGAESQSRTDAAADIATSIAAIVAQAAAGDTLDTCHAGAGDPRADGTLAAPVSSGCA ITRGAARYAANARNTSGVTSLASLSAIRTSRASPDQTAAATPDACADRAALLAQNLALFDGRRDDVQANLVGGVTRDNWR TVTTRSTWGPTAAFYGTLATPAACADADTFARELVIAAENYWIDQGINYCHHHIPGWTPPDDSAAAAPRYRNSSAGSTSG ASSNGMTCTAQRSGTGAQIVPGTAPSAGFSASEIQWNGVDCSDFTSWIYNFVGLTGVRLPTAIGSQACAANEGADALPTP GVLLDIDSGNIDAMLPALKPGDLLYITQVDPLASGSDAGGYQLAHVVTWTGKRWSDLQAGPDAARYALARLGQPGSRLGG DLAKYLPLADLATQNPWMIIDSHYAGPAYRPFVGWYRRSLSNVRRIVGADAARRDPALAPYVIAPIASDARGDTLTLASP HANASAQQGWRMIYRQSGGTPSCVRAGIAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68254; Mature: 68254
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLHRSIVVPLVFSAMFLAGCGSSVDGRFTSGMVAMGAVAGSTVAAYPIGADGTIGAQPL CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCE AVTTSDASGAFSLPALDRWPALIRATHGAYVEEATGAAATLEGDGLEAVYASAPSTIVVS EEEECCCCCCEECCCHHHCHHHHHHHCCCHHHHCCCCEEEECCCCCEEEEECCCCEEEEC PYSSAVVATARAAGGLTQANIAAAIATISAFVGDFDPQQTRPATMAAGAAAPAIEPGHQM CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCEE ALALGAESQSRTDAAADIATSIAAIVAQAAAGDTLDTCHAGAGDPRADGTLAAPVSSGCA EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEECCCCCCCE ITRGAARYAANARNTSGVTSLASLSAIRTSRASPDQTAAATPDACADRAALLAQNLALFD EECCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GRRDDVQANLVGGVTRDNWRTVTTRSTWGPTAAFYGTLATPAACADADTFARELVIAAEN CCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHCCHHHHHHHEEEHCCC YWIDQGINYCHHHIPGWTPPDDSAAAAPRYRNSSAGSTSGASSNGMTCTAQRSGTGAQIV EEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEE PGTAPSAGFSASEIQWNGVDCSDFTSWIYNFVGLTGVRLPTAIGSQACAANEGADALPTP CCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCHHCCCCCCCCCCCC GVLLDIDSGNIDAMLPALKPGDLLYITQVDPLASGSDAGGYQLAHVVTWTGKRWSDLQAG CEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC PDAARYALARLGQPGSRLGGDLAKYLPLADLATQNPWMIIDSHYAGPAYRPFVGWYRRSL CHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH SNVRRIVGADAARRDPALAPYVIAPIASDARGDTLTLASPHANASAQQGWRMIYRQSGGT HHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCC PSCVRAGIAQ HHHHHHCCCC >Mature Secondary Structure MNLHRSIVVPLVFSAMFLAGCGSSVDGRFTSGMVAMGAVAGSTVAAYPIGADGTIGAQPL CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCE AVTTSDASGAFSLPALDRWPALIRATHGAYVEEATGAAATLEGDGLEAVYASAPSTIVVS EEEECCCCCCEECCCHHHCHHHHHHHCCCHHHHCCCCEEEECCCCCEEEEECCCCEEEEC PYSSAVVATARAAGGLTQANIAAAIATISAFVGDFDPQQTRPATMAAGAAAPAIEPGHQM CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCEE ALALGAESQSRTDAAADIATSIAAIVAQAAAGDTLDTCHAGAGDPRADGTLAAPVSSGCA EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEECCCCCCCE ITRGAARYAANARNTSGVTSLASLSAIRTSRASPDQTAAATPDACADRAALLAQNLALFD EECCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GRRDDVQANLVGGVTRDNWRTVTTRSTWGPTAAFYGTLATPAACADADTFARELVIAAEN CCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHCCHHHHHHHEEEHCCC YWIDQGINYCHHHIPGWTPPDDSAAAAPRYRNSSAGSTSGASSNGMTCTAQRSGTGAQIV EEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEE PGTAPSAGFSASEIQWNGVDCSDFTSWIYNFVGLTGVRLPTAIGSQACAANEGADALPTP CCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCHHCCCCCCCCCCCC GVLLDIDSGNIDAMLPALKPGDLLYITQVDPLASGSDAGGYQLAHVVTWTGKRWSDLQAG CEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC PDAARYALARLGQPGSRLGGDLAKYLPLADLATQNPWMIIDSHYAGPAYRPFVGWYRRSL CHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH SNVRRIVGADAARRDPALAPYVIAPIASDARGDTLTLASPHANASAQQGWRMIYRQSGGT HHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCC PSCVRAGIAQ HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA