Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
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Accession | NC_009075 |
Length | 3,127,456 |
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The map label for this gene is pmi [H]
Identifier: 126443679
GI number: 126443679
Start: 362596
End: 363699
Strand: Reverse
Name: pmi [H]
Synonym: BURPS668_A0395
Alternate gene names: 126443679
Gene position: 363699-362596 (Counterclockwise)
Preceding gene: 126445518
Following gene: 284159970
Centisome position: 11.63
GC content: 71.47
Gene sequence:
>1104_bases ATGTCCGCCCCCGTTTCCGTTTCCGACCAGGCCGCCCGATTGCGCCGCCACTTCGCGCAGATCGTCTTGCCGATCTGGCG CGGGCCCGGCTTCAATCCGGCGCTGCAACTGCCGTTCGAGGCCGTCGCGCCGGACACGCACGCGCCGCTGCCCGTCACCC GCTATCGCGCGATGGCGTGCGCGCGCCAGTTGTTCGTATTCTCGCAGGCGGGCGACGCGCAGCACGCGCACGCGCTCTTT GCCGCATTGTGCCGTCACTTTCGCGATCCTCGCCACGACGGCTGGTTTTACAGTGTCGACGCGCAGGGCGCGCCGCTCGA CCGCACGAAGGACCTGTACACGCATGCGTTCGTCGTGTTCGCATGCGCCGAGTATTTCGCGGCGTTCGGCAACCGCGACG CGCGCGAGCTCGCGCAACGCACGGCGGCGCTGATCGTCGATCGCTTCGCGCCTCGGCCGGGCAGCGCGCTGCTCGATTCC GCACGCGGCGAGGACTTCGCCGCGGCGGCGGGCGGCCCGTTGCAGAATCCGCTGATGCACCTGACCGAAGGCTGGCTCGC CGCCGGCCGCGCGTTCGGCGACACCGCGTTCGACGACGCGCTGCTGCGCACCGCGCAGGCGGTCGAGCGCACGTTCGTCG ATCCGCACACCGGCTGCGTCGCGGAATTGCCGATCGGCTGCGCGGACAACCGCTTCGAGCCCGGCCATCAGTTCGAGTGG TTCTATCTCGTCGCCTCGGCGGGCGCGCGGCTCGCGGCGACCGGCCTGCCCGACGCGCTCGCGCGCGCATACGCGTTCGC GCAACGGCACGGCGTCGATCCGGACACGGGCGGCGTCAGCGCGGCGACCGACGAGCGCGGCGCATGCGTCGACGGCACGC AGCGGATCTGGGCGCAAACCGAATATCTGCGCGCGCTCGCGACGCATGGCGGCGAGCCGGACGCGCTCGCGCGCCAGATC GCGCGCTTTGCCGAGCGGTTCCTGCATCCGCGCGGCTGGTACGAATGCAAGACTGCGCAGGGCGAGGTATCGCGCGCGGA CATGCCGTCGACGACGCCGTATCACCTCGCGACCGCGTACGCTTCGTTGCCGGCGGGGACGTGA
Upstream 100 bases:
>100_bases CCATGTTCGACGGCGGCGGCCCGCATGCTTTATCCTTGCCGCTCGGCGCCGCGCGTGCGGCGCCCGCGTTCTTCCCCCGT CAACCGCGCCGCCATCCGTC
Downstream 100 bases:
>100_bases CGCACCGCGCGCCCGCGCCGCGTGCCGCGCGGAATCCGGCATCCCGCCGTAGCGCCGCCGCCGCGCGCCGCTCGCCCGTG CGCTAAAGCGCGGCCTGCCG
Product: N-acylglucosamine 2-epimerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTHAPLPVTRYRAMACARQLFVFSQAGDAQHAHALF AALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFAAFGNRDARELAQRTAALIVDRFAPRPGSALLDS ARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQAVERTFVDPHTGCVAELPIGCADNRFEPGHQFEW FYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERGACVDGTQRIWAQTEYLRALATHGGEPDALARQI ARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT
Sequences:
>Translated_367_residues MSAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTHAPLPVTRYRAMACARQLFVFSQAGDAQHAHALF AALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFAAFGNRDARELAQRTAALIVDRFAPRPGSALLDS ARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQAVERTFVDPHTGCVAELPIGCADNRFEPGHQFEW FYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERGACVDGTQRIWAQTEYLRALATHGGEPDALARQI ARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT >Mature_366_residues SAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTHAPLPVTRYRAMACARQLFVFSQAGDAQHAHALFA ALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFAAFGNRDARELAQRTAALIVDRFAPRPGSALLDSA RGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQAVERTFVDPHTGCVAELPIGCADNRFEPGHQFEWF YLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERGACVDGTQRIWAQTEYLRALATHGGEPDALARQIA RFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 39822; Mature: 39691
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTHAPLPVTRYRAMAC CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHCCCCCCCCCHHHHHHHHH ARQLFVFSQAGDAQHAHALFAALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVF HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH ACAEYFAAFGNRDARELAQRTAALIVDRFAPRPGSALLDSARGEDFAAAAGGPLQNPLMH HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHCCCCCCCHHHHH LTEGWLAAGRAFGDTAFDDALLRTAQAVERTFVDPHTGCVAELPIGCADNRFEPGHQFEW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEEE FYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERGACVDGTQRIWAQT EEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH EYLRALATHGGEPDALARQIARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAY HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH ASLPAGT HHCCCCC >Mature Secondary Structure SAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTHAPLPVTRYRAMAC CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHCCCCCCCCCHHHHHHHHH ARQLFVFSQAGDAQHAHALFAALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVF HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH ACAEYFAAFGNRDARELAQRTAALIVDRFAPRPGSALLDSARGEDFAAAAGGPLQNPLMH HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHCCCCCCCHHHHH LTEGWLAAGRAFGDTAFDDALLRTAQAVERTFVDPHTGCVAELPIGCADNRFEPGHQFEW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEEE FYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERGACVDGTQRIWAQT EEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH EYLRALATHGGEPDALARQIARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAY HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH ASLPAGT HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]