Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
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Accession | NC_009075 |
Length | 3,127,456 |
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The map label for this gene is 126443599
Identifier: 126443599
GI number: 126443599
Start: 440013
End: 440363
Strand: Reverse
Name: 126443599
Synonym: BURPS668_A0484
Alternate gene names: NA
Gene position: 440363-440013 (Counterclockwise)
Preceding gene: 126445467
Following gene: 126443081
Centisome position: 14.08
GC content: 52.99
Gene sequence:
>351_bases ATGGGATCTGCGTCCTTTAGCTGCTTTCATCGGCCGAATGAATCAATCGAATGGCTTTCGATGGGCCTGTACCCTTTATT TCGGCAGGCATTCGAAAAAATTGACCTCGCACCGAGAAAATCCGACACGGCGACTTTGGTATTGACATGGGTCAACCCGC GCGCGCGGAAGCATCGACTTCGCCCGGGCGGCCCGCCCGAGCGGCATCGCGCTACCTCAATGATTGTGCCCGGCGATTCG TCGCCCTCTGATCGGAATCAAACATTTTCGCCTGAATTATTTCGCGACTCCTATCGGGCGAATATTCAGGAATTGAAAAC GATATTCGCCGGCGAAAATACCGTTTCTTGA
Upstream 100 bases:
>100_bases GCGGCCGTGCGGATCGGTCGTCGACATCAATGTCGCGTCGTCGGGAAGCTCGAATTCGTGTTGGGTGACGGGTTGGTTGT TACGCATGAGCGCTCCGAAT
Downstream 100 bases:
>100_bases AATGCGCGGAATGCGCCCGATTCGGCTATCCGGGCATTTCCGCGAGCGCCGATTTATCCTTGAAGCCGGCGGGTCAAGCG AATCCGGCAGACGGCGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MGSASFSCFHRPNESIEWLSMGLYPLFRQAFEKIDLAPRKSDTATLVLTWVNPRARKHRLRPGGPPERHRATSMIVPGDS SPSDRNQTFSPELFRDSYRANIQELKTIFAGENTVS
Sequences:
>Translated_116_residues MGSASFSCFHRPNESIEWLSMGLYPLFRQAFEKIDLAPRKSDTATLVLTWVNPRARKHRLRPGGPPERHRATSMIVPGDS SPSDRNQTFSPELFRDSYRANIQELKTIFAGENTVS >Mature_115_residues GSASFSCFHRPNESIEWLSMGLYPLFRQAFEKIDLAPRKSDTATLVLTWVNPRARKHRLRPGGPPERHRATSMIVPGDSS PSDRNQTFSPELFRDSYRANIQELKTIFAGENTVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13179; Mature: 13048
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSASFSCFHRPNESIEWLSMGLYPLFRQAFEKIDLAPRKSDTATLVLTWVNPRARKHRL CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHCCC RPGGPPERHRATSMIVPGDSSPSDRNQTFSPELFRDSYRANIQELKTIFAGENTVS CCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure GSASFSCFHRPNESIEWLSMGLYPLFRQAFEKIDLAPRKSDTATLVLTWVNPRARKHRL CCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHCCC RPGGPPERHRATSMIVPGDSSPSDRNQTFSPELFRDSYRANIQELKTIFAGENTVS CCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA