Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
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Accession | NC_009075 |
Length | 3,127,456 |
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The map label for this gene is 126443339
Identifier: 126443339
GI number: 126443339
Start: 1016803
End: 1017282
Strand: Reverse
Name: 126443339
Synonym: BURPS668_A1052
Alternate gene names: NA
Gene position: 1017282-1016803 (Counterclockwise)
Preceding gene: 126444356
Following gene: 126444859
Centisome position: 32.53
GC content: 71.25
Gene sequence:
>480_bases TTGACGGCCGCACTGCTCACGTCCGCGACGATGGCCGCGCACGCCGCCCCGCCGCCGCCGCCCGAGCTCGTCCCCCGGGA CGCCGCCCGGGACCGCGCCTTCGCCGCCGCCGGCATCCAGGTCTATTCGTGCGAATACGACGGTAACCATCGTCTCGCGT GGACTTTCCAGCATCCCGAAGCGACGCTCTACGACGCCGCCGGCGTCGCCGTGATCAAGCACGGCGCGGGGCCGGCGTGG GAAGCGCAAGACGGCAGCCGCATCGTCGGCGAGAAACTCGCCGAAGCGCCGAGCCCGAACGCGGACAGCATTGCGCAACT GCTGCTGTCGACACGCGCGGGCGCGAGCGGCTCGCTCGCGTCGGTGCGCTACGTGCAGCGTCTCGATACGAAAGGCGGCA CCGCGCCCGCGGCGGCGTGCACGGCCGAGCATCAAACCGGCGGCTCGCCGTATTACGCGCGCTACGTGTTCTGGAAGTAA
Upstream 100 bases:
>100_bases GATCGTCACCGTGCCAAAAAGCGCTGAAACCGTTCGCCCCTCCAGCCGGTGCGCAATGCGCCATGTCGACCGCCAAGACC GAAGCCGCCTTGCACGCCGC
Downstream 100 bases:
>100_bases CGCGAGGGAGCCTGCGCACGAGCGCTTCGCGCCGCCCCGGCGCCGGTGCGCGCGCGCCCGACGCACGCACCGACGCACGC AAGCCCGGCGCACGCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTAALLTSATMAAHAAPPPPPELVPRDAARDRAFAAAGIQVYSCEYDGNHRLAWTFQHPEATLYDAAGVAVIKHGAGPAW EAQDGSRIVGEKLAEAPSPNADSIAQLLLSTRAGASGSLASVRYVQRLDTKGGTAPAAACTAEHQTGGSPYYARYVFWK
Sequences:
>Translated_159_residues MTAALLTSATMAAHAAPPPPPELVPRDAARDRAFAAAGIQVYSCEYDGNHRLAWTFQHPEATLYDAAGVAVIKHGAGPAW EAQDGSRIVGEKLAEAPSPNADSIAQLLLSTRAGASGSLASVRYVQRLDTKGGTAPAAACTAEHQTGGSPYYARYVFWK >Mature_158_residues TAALLTSATMAAHAAPPPPPELVPRDAARDRAFAAAGIQVYSCEYDGNHRLAWTFQHPEATLYDAAGVAVIKHGAGPAWE AQDGSRIVGEKLAEAPSPNADSIAQLLLSTRAGASGSLASVRYVQRLDTKGGTAPAAACTAEHQTGGSPYYARYVFWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16636; Mature: 16504
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAALLTSATMAAHAAPPPPPELVPRDAARDRAFAAAGIQVYSCEYDGNHRLAWTFQHPE CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEECCEEEEEEEECCCCEEEEEEECCC ATLYDAAGVAVIKHGAGPAWEAQDGSRIVGEKLAEAPSPNADSIAQLLLSTRAGASGSLA CEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHH SVRYVQRLDTKGGTAPAAACTAEHQTGGSPYYARYVFWK HHHHHHHHCCCCCCCCHHHEECCCCCCCCCEEEEEEEEC >Mature Secondary Structure TAALLTSATMAAHAAPPPPPELVPRDAARDRAFAAAGIQVYSCEYDGNHRLAWTFQHPE CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEECCEEEEEEEECCCCEEEEEEECCC ATLYDAAGVAVIKHGAGPAWEAQDGSRIVGEKLAEAPSPNADSIAQLLLSTRAGASGSLA CEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHH SVRYVQRLDTKGGTAPAAACTAEHQTGGSPYYARYVFWK HHHHHHHHCCCCCCCCHHHEECCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA