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The map label for this gene is tldD [H]

Identifier: 126209004

GI number: 126209004

Start: 1753394

End: 1754854

Strand: Reverse

Name: tldD [H]

Synonym: APL_1540

Alternate gene names: 126209004

Gene position: 1754854-1753394 (Counterclockwise)

Preceding gene: 126209006

Following gene: 126209003

Centisome position: 77.15

GC content: 46.82

Gene sequence:

>1461_bases
ATGTTAAATCAAGTTTCAGAAAGCTTGCTTGCGCCAAGTGGGCTTGAGTTATCGCACTTGAGTAAAGTGCTTAATCATTT
TGCGAATCGCCAAATTGATTATGCGGATCTCTATTTTCAGTTAAGCCAAGACGAGAGTTGGTCGTTAGAAGATTCGATTA
TCAAAGAGGGCGGTTTTTATATTGACCGTGGTTTCGGTGTGCGTGCGGTATCAGGCGAGAAAACCGGCTTTGCGTATGCA
GACCAAATCGGCTTGAGCCAGCTTGAACAATGTGCAACCGCAGCCCGTTCGATTACTAATGCAAGCGGTCAATTATCGGT
AAAAAGTTTCAAACAAACGAATGCGATCAAACGTTATGCGTCGGTCAATCCGTTGGATACGTTAAGCCGTGAGCAAAAAG
TTGAGCTACTCCATTTAGTCGATAAAGTTGCACGTGCGGAAGATCCTCGAGTGATTCAAGTTAATGCAGGGCTTTCAGCA
GTTTATGAAGAAATGTTAGTAGCAGCGACGGATGGCACGCTTGCGGCGGATATTCGCCCGTTGGTGCGTTTATCAGTTTC
GGTATTGGTAGAAGAAAATAGTAAACGTGAGCGTGGTTCTGCCGGTGCCGGTGGACGTTTCGGCTTAAACTGGTTCTTTG
AGCCGCAGGTGGTTAATGGGGAAATGACCGGCGATACTCGAGCGGTTTATCTGGCGAAAGAAGCGGTACGTATGGCATTA
GTCAATCTAAGTGCAATGCCTGCACCAGCCGGCACAATGCCGATTGTATTGGGTGCGGGTTGGCCGGGTATTTTACTTCA
TGAAGCGGTTGGGCACGGGTTAGAGGGCGACTTTAATCGTAAAGAATCTTCGCTATTTACCGGCAAAATTGGGGAGTTAG
TCACTTCGCCGCTTTGTACTATTGTTGATGATGGCACGGTGCCAAATGTTCGAGGCTCGATTACGGTAGATGACGAGGGG
GTACCTTCGCAACGTAACGTATTGATCGAAAACGGGATTTTAAAAGGCTATATGCAAGATAAACTTAACGCCCGTTTAAT
GGGAGTTGCTCCAACTGGCAACGGTCGCCGTGAGTCTTATGCACATCTACCAATGCCTCGTATGACCAATACCTATTTAA
CAGAAGGCTCGCACAGTTTTGAGGAAATGATTGAATCAGTTGATTACGGTATTTACGCACCGCATTTCAGCGGCGGTCAG
GTGGATATTACTTCGGGTAAATTTGTGTTCTCAACTGCAGAAGCTTATTTAATCGAAAAAGGTAAAATCACCAAACCGGT
TATCGGCGCAACCTTAATCGGCAGCGGTATTGACGCTATGCAGCAGGTTTCAATGGTCGGTAAGAAAATGGAACTCGACC
CAGGTATCGGCACTTGCGGTAAAGAAGGACAATCCGTCCCAGTCGGTGTAGGTCAGCCTACCGTGAAGTTAGATAAGATT
ACGGTTGGCGGACGAGGGTAA

Upstream 100 bases:

>100_bases
TTCATTCTATCATTATTCCGCGCCCCTTTTTGAAAAAGAGCAGTGAGAGCCGGATTTAATATGTTAAAATTTAAAGAATT
TTATTAAGAAGAGAAAAACA

Downstream 100 bases:

>100_bases
ATAAAGGCGGTAAGATTCAACAATCTTGCTGTTTTTTATACTAAAGCGATTGTGATTGCCTTACTTCGTTAAATCTTTTA
AGATGTATATCTATTGTGTA

Product: TldD-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MLNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYIDRGFGVRAVSGEKTGFAYA
DQIGLSQLEQCATAARSITNASGQLSVKSFKQTNAIKRYASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSA
VYEEMLVAATDGTLAADIRPLVRLSVSVLVEENSKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMAL
VNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTVPNVRGSITVDDEG
VPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQ
VDITSGKFVFSTAEAYLIEKGKITKPVIGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDKI
TVGGRG

Sequences:

>Translated_486_residues
MLNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYIDRGFGVRAVSGEKTGFAYA
DQIGLSQLEQCATAARSITNASGQLSVKSFKQTNAIKRYASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSA
VYEEMLVAATDGTLAADIRPLVRLSVSVLVEENSKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMAL
VNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTVPNVRGSITVDDEG
VPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQ
VDITSGKFVFSTAEAYLIEKGKITKPVIGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDKI
TVGGRG
>Mature_486_residues
MLNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYIDRGFGVRAVSGEKTGFAYA
DQIGLSQLEQCATAARSITNASGQLSVKSFKQTNAIKRYASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSA
VYEEMLVAATDGTLAADIRPLVRLSVSVLVEENSKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMAL
VNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTVPNVRGSITVDDEG
VPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQ
VDITSGKFVFSTAEAYLIEKGKITKPVIGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDKI
TVGGRG

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=483, Percent_Identity=67.7018633540373, Blast_Score=640, Evalue=0.0,
Organism=Escherichia coli, GI1790682, Length=410, Percent_Identity=22.9268292682927, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 52116; Mature: 52116

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFY
CCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHCCCEE
IDRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNASGQLSVKSFKQTNAIKRYA
EECCCCEEEECCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH
SVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIRP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHEEECCCCHHHHHHH
LVRLSVSVLVEENSKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMAL
HHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEECCEECCCCEEEEEHHHHHHHHH
VNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCT
HHCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHCCCCE
IVDDGTVPNVRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESY
EECCCCCCCCCCEEEECCCCCCCCCCEEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCE
AHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIEK
ECCCCCCCCCCEECCCCHHHHHHHHHCCCCEECCCCCCCEEEEECCCEEEEECCEEEEEC
GKITKPVIGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDKI
CCCCCCHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE
TVGGRG
EECCCC
>Mature Secondary Structure
MLNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFY
CCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHCCCEE
IDRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNASGQLSVKSFKQTNAIKRYA
EECCCCEEEECCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH
SVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIRP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHEEECCCCHHHHHHH
LVRLSVSVLVEENSKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMAL
HHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEECCEECCCCEEEEEHHHHHHHHH
VNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCT
HHCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHCCCCE
IVDDGTVPNVRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESY
EECCCCCCCCCCEEEECCCCCCCCCCEEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCE
AHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIEK
ECCCCCCCCCCEECCCCHHHHHHHHHCCCCEECCCCCCCEEEEECCCEEEEECCEEEEEC
GKITKPVIGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDKI
CCCCCCHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE
TVGGRG
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]