Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is crcB [H]
Identifier: 126208997
GI number: 126208997
Start: 1747900
End: 1748271
Strand: Reverse
Name: crcB [H]
Synonym: APL_1533
Alternate gene names: 126208997
Gene position: 1748271-1747900 (Counterclockwise)
Preceding gene: 126208998
Following gene: 126208995
Centisome position: 76.86
GC content: 42.47
Gene sequence:
>372_bases ATGACTATTCTTTGGATTTCTCTCGGTGCGGTGTTAGGCGCAATTTCTCGCTGGCAATTAGGCGTATGGTTTAACGGTTT TCTCAGCCAGTTTGCCTTTGGTACATTATTAGCCAATTTGCTCGGCTGCTTCTTAATTGGGATTGCCATCGGATTGCATT TGAATGACGGGCAGAAGTTGCTGTTTATCACCGGTTTTTTAGGCAGTTTTACCACTTTTTCGAGTTTTTCGTTAGAAGTA AGTGAAAAGTTATTAGCGGAGAAGTATTGGCAAGCATTGAGCGTAATCGGCTTGCATTTAATCGGCGGAATCTTATGTAC GGTGATGGGAATCTTGTTAGTACGCCTTTTTACAAGCGGTCGGATTTCCTAA
Upstream 100 bases:
>100_bases GTGCCAATCGAGGCTTTATTTTCGGTGCATCACGTCTGTTGCTTTCGATTGCGACGGTAGTGGTGATGAATTTAATTCCT CATTTGTTTTTGGTGTAGCT
Downstream 100 bases:
>100_bases ATTTTTTGCAAAAAAATGCCCTCGCAACTTAACGTTGGAGGGCATTTGTATTTTCTTAAATCATCAGCGAATTAAAGTAG AATATTGGCTAATAATAAAC
Product: camphor resistance-like protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTILWISLGAVLGAISRWQLGVWFNGFLSQFAFGTLLANLLGCFLIGIAIGLHLNDGQKLLFITGFLGSFTTFSSFSLEV SEKLLAEKYWQALSVIGLHLIGGILCTVMGILLVRLFTSGRIS
Sequences:
>Translated_123_residues MTILWISLGAVLGAISRWQLGVWFNGFLSQFAFGTLLANLLGCFLIGIAIGLHLNDGQKLLFITGFLGSFTTFSSFSLEV SEKLLAEKYWQALSVIGLHLIGGILCTVMGILLVRLFTSGRIS >Mature_122_residues TILWISLGAVLGAISRWQLGVWFNGFLSQFAFGTLLANLLGCFLIGIAIGLHLNDGQKLLFITGFLGSFTTFSSFSLEVS EKLLAEKYWQALSVIGLHLIGGILCTVMGILLVRLFTSGRIS
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13356; Mature: 13225
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILWISLGAVLGAISRWQLGVWFNGFLSQFAFGTLLANLLGCFLIGIAIGLHLNDGQKL CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEE LFITGFLGSFTTFSSFSLEVSEKLLAEKYWQALSVIGLHLIGGILCTVMGILLVRLFTSG EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RIS CCC >Mature Secondary Structure TILWISLGAVLGAISRWQLGVWFNGFLSQFAFGTLLANLLGCFLIGIAIGLHLNDGQKL EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEE LFITGFLGSFTTFSSFSLEVSEKLLAEKYWQALSVIGLHLIGGILCTVMGILLVRLFTSG EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RIS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA