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The map label for this gene is ygaV [C]

Identifier: 126207966

GI number: 126207966

Start: 552220

End: 552507

Strand: Direct

Name: ygaV [C]

Synonym: APL_0482

Alternate gene names: 126207966

Gene position: 552220-552507 (Clockwise)

Preceding gene: 126207960

Following gene: 126207967

Centisome position: 24.28

GC content: 42.01

Gene sequence:

>288_bases
ATGAGTGAGATATTTGAAAAGGCGGGTGAAGCGAGCAATTTTCTAAAATTATTGGCAAACCCGAATAGATTGGCGATTTT
ATGTTGCTTATTGGAAAAGGATTGCAATGTAAGCGAACTATGCCAAGCTATCGGTATGCCGCAAGCGGCAACCTCCAATC
AATTGGCAATTTTAAGAGCGGCAGGTGTGATTGTTGCCGAAGTGAAACATCGGGAACGCGTTTATCGAGTGGAAGATGAA
AAAGTGAGGGCGATTTTAGCCGTTTTACACCAATTTTATTGCGAATAG

Upstream 100 bases:

>100_bases
TTTTTTATATAATATTTTTGTGATTGAATTCTGTCAATAAATTTTTTAAAATTAACGATAGATTTTTTTAACTCTTATTG
AGCATAAAACAGGAAGTAAA

Downstream 100 bases:

>100_bases
TTTGATTTTTACGTCACTGCCACATAAGATTGAAAAAACGTGTAATGTCGGACGTTTATTTTATCGGAGGCAATATGATG
AGCAAACCAACCTTAGAAAC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family Protein; ArsR Family Transcriptional Regulator; Regulatory Protein ArsR; ArsR Family Regulatory Protein; Transcriptional Regulator; Transcriptional Regulator SoxR; ArsR-Family Transcriptional Regulator; Transcription Regulator ArsR; Biofilm Growth-Associated Repressor

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSEIFEKAGEASNFLKLLANPNRLAILCCLLEKDCNVSELCQAIGMPQAATSNQLAILRAAGVIVAEVKHRERVYRVEDE
KVRAILAVLHQFYCE

Sequences:

>Translated_95_residues
MSEIFEKAGEASNFLKLLANPNRLAILCCLLEKDCNVSELCQAIGMPQAATSNQLAILRAAGVIVAEVKHRERVYRVEDE
KVRAILAVLHQFYCE
>Mature_94_residues
SEIFEKAGEASNFLKLLANPNRLAILCCLLEKDCNVSELCQAIGMPQAATSNQLAILRAAGVIVAEVKHRERVYRVEDEK
VRAILAVLHQFYCE

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10590; Mature: 10458

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIFEKAGEASNFLKLLANPNRLAILCCLLEKDCNVSELCQAIGMPQAATSNQLAILRA
CCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHH
AGVIVAEVKHRERVYRVEDEKVRAILAVLHQFYCE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEIFEKAGEASNFLKLLANPNRLAILCCLLEKDCNVSELCQAIGMPQAATSNQLAILRA
CHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHH
AGVIVAEVKHRERVYRVEDEKVRAILAVLHQFYCE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA