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The map label for this gene is lemA [H]

Identifier: 126207826

GI number: 126207826

Start: 378173

End: 378733

Strand: Reverse

Name: lemA [H]

Synonym: APL_0342

Alternate gene names: 126207826

Gene position: 378733-378173 (Counterclockwise)

Preceding gene: 126207827

Following gene: 126207825

Centisome position: 16.65

GC content: 42.07

Gene sequence:

>561_bases
GTGATTGCCGTAGTTGCGATCGGCGGTTTCTCTTTAACCAAATATAACGATTTAATGCGTGCGGAAGAAGACATCAACTC
AGTGTGGGGAAATGTAGAATCCGCTTATCAACGCCGTGCGGACTTAATTCCTAACTTAGTGAACACGGTAAAAGGTCAAG
CCAACTTTGAAAAAGAAACCTTAACATCCGTGATTGAAGCGCGAGCTAAAGCAACGGCGGTAACCATTGATCTGAATAAT
GCGACCGAAGAACAAATGGCGAAATTCCAAGAAGCGCAACAAGGTGTAAATTCTGCCCTTTCTCGTTTATTAGTTTCCGT
TGAAAAATACCCTGAATTAAAAGCGCACGAAGGTTTCTTAAATCTTCAAGCGCAATTAGAAGGTACGGAAAACCGTATCA
ATGTCGAGCGTAATAACTTCAACGCTGCGGTGAAAGAATATAACAAACAAGTGCGTGAGTTCCCGACTAAAATCGCTGCG
ATGATTATGGGCTTTAAAGCTAAACCGCAATTTAAAGCCGAAGCGGGTTCGGAAAAAGCACCGACTGTAAACTTTAATTA
A

Upstream 100 bases:

>100_bases
TTGTAAGTTTGCTAGGAAATTAGACCGCTTGCCGATAAAATCCGCCCGTTTTTTAACCCTAAATAGGACTTTTTAATATG
AAAAAATTTTTTGGATCTTA

Downstream 100 bases:

>100_bases
TCTCTTACCACGAAAAGCACGGAATGATCGGAAATCTTCCGTGTTTTCCGTGTTAGTGGTAACGCTATGAAATTATTTTC
TTTTCTTTCGAACAAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MIAVVAIGGFSLTKYNDLMRAEEDINSVWGNVESAYQRRADLIPNLVNTVKGQANFEKETLTSVIEARAKATAVTIDLNN
ATEEQMAKFQEAQQGVNSALSRLLVSVEKYPELKAHEGFLNLQAQLEGTENRINVERNNFNAAVKEYNKQVREFPTKIAA
MIMGFKAKPQFKAEAGSEKAPTVNFN

Sequences:

>Translated_186_residues
MIAVVAIGGFSLTKYNDLMRAEEDINSVWGNVESAYQRRADLIPNLVNTVKGQANFEKETLTSVIEARAKATAVTIDLNN
ATEEQMAKFQEAQQGVNSALSRLLVSVEKYPELKAHEGFLNLQAQLEGTENRINVERNNFNAAVKEYNKQVREFPTKIAA
MIMGFKAKPQFKAEAGSEKAPTVNFN
>Mature_186_residues
MIAVVAIGGFSLTKYNDLMRAEEDINSVWGNVESAYQRRADLIPNLVNTVKGQANFEKETLTSVIEARAKATAVTIDLNN
ATEEQMAKFQEAQQGVNSALSRLLVSVEKYPELKAHEGFLNLQAQLEGTENRINVERNNFNAAVKEYNKQVREFPTKIAA
MIMGFKAKPQFKAEAGSEKAPTVNFN

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20657; Mature: 20657

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVVAIGGFSLTKYNDLMRAEEDINSVWGNVESAYQRRADLIPNLVNTVKGQANFEKET
CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LTSVIEARAKATAVTIDLNNATEEQMAKFQEAQQGVNSALSRLLVSVEKYPELKAHEGFL
HHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCE
NLQAQLEGTENRINVERNNFNAAVKEYNKQVREFPTKIAAMIMGFKAKPQFKAEAGSEKA
EEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PTVNFN
CCCCCC
>Mature Secondary Structure
MIAVVAIGGFSLTKYNDLMRAEEDINSVWGNVESAYQRRADLIPNLVNTVKGQANFEKET
CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LTSVIEARAKATAVTIDLNNATEEQMAKFQEAQQGVNSALSRLLVSVEKYPELKAHEGFL
HHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCE
NLQAQLEGTENRINVERNNFNAAVKEYNKQVREFPTKIAAMIMGFKAKPQFKAEAGSEKA
EEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PTVNFN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]