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The map label for this gene is selD [H]

Identifier: 126207811

GI number: 126207811

Start: 364716

End: 365633

Strand: Direct

Name: selD [H]

Synonym: APL_0327

Alternate gene names: 126207811

Gene position: 364716-365633 (Clockwise)

Preceding gene: 126207808

Following gene: 126207812

Centisome position: 16.04

GC content: 46.3

Gene sequence:

>918_bases
TTGGTGGGGAATGAAACTGCCGATGATGCCGCTGTTTATGATATCGGTAATGGCATTGGTATTATCAGTACCACGGACTT
TTTTATGCCGATTGTGGACGATCCGTTTGATTTCGGACGCATTGCGGCGGCAAATGCGTTAAGTGATGTGTTTGCGATGG
GCGGTAAGCCGATTATGGCGATTGCAATTTTGGGCTTTCCGGTAAACAAATTGCCGGCGGAAGTGGCGCAAAAAATTGTG
GAAGGCGGGCGTTTTGCTTGTCAGCAAGCCGGTATTGCCTTAGCCGGCGGTCATTCGATTGATTCGCCTGAACCGATTTT
CGGGCTGGCGGTAACCGGAACGGTTAGTACCGAGCAAGTGAAAAAGAATGCTTCGGCACAAGCCGGTTGCGAACTGTTTT
TAACTAAACCGCTCGGTATCGGCGTATTAACAACCGCTGAGAAAAAAGGTTTATTAAAGGTGGAACATCAGAATCTTGCA
CGTGACGTGATGTGTCAAATTAATTTAATTGGTGCACAGTTCTCTCAATTAGCTGATGTTACAGCGATGACGGATGTCAC
CGGTTTCGGTTTATTAGGGCATTTAAGTGAAATTTGCCAAGGTTCTAATGTACGTGCCGAAGTGAATTCTGCCGAAATCC
ATACGCTTGACGGTGTGAAAGACTATATCGCACAAGGTGCGGTGCCGGGCGGAACAAACCGTAACTTTGACAGTTACGGG
CATCTAATTTCAGCCATGAGTGATGAACAAAAGGCGATTTTGTGTGATCCGCAAACTTCCGGCGGTTTGTTAATTGCAGT
GCGTCCGCAAGCGGTCGAAAAAGTGCAACAAATTGCAAAACAAGCAAACATACCTTTATTTAGAGTGGGGCGTTTACTTG
AAGCGGACACTATGAAGCCGTTAATCGAGGTTATTTAA

Upstream 100 bases:

>100_bases
GCAATACAGTCACGGTGCCGGTTGAGGCTGTAAAATTTCTCCTAAGGTGTTAGGGACGATTTTACAAAGTCAGCTGGACA
AATTTATTGATCCGAATTTA

Downstream 100 bases:

>100_bases
GGATATGCATAAACCGAATATCACTTTAGCCTGTGTGGTACATTGCAAAGGTAAATTTTTATTTGTGGAAGAAATCGAAT
ACGGTAAACGGACCTTAAAC

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MVGNETADDAAVYDIGNGIGIISTTDFFMPIVDDPFDFGRIAAANALSDVFAMGGKPIMAIAILGFPVNKLPAEVAQKIV
EGGRFACQQAGIALAGGHSIDSPEPIFGLAVTGTVSTEQVKKNASAQAGCELFLTKPLGIGVLTTAEKKGLLKVEHQNLA
RDVMCQINLIGAQFSQLADVTAMTDVTGFGLLGHLSEICQGSNVRAEVNSAEIHTLDGVKDYIAQGAVPGGTNRNFDSYG
HLISAMSDEQKAILCDPQTSGGLLIAVRPQAVEKVQQIAKQANIPLFRVGRLLEADTMKPLIEVI

Sequences:

>Translated_305_residues
MVGNETADDAAVYDIGNGIGIISTTDFFMPIVDDPFDFGRIAAANALSDVFAMGGKPIMAIAILGFPVNKLPAEVAQKIV
EGGRFACQQAGIALAGGHSIDSPEPIFGLAVTGTVSTEQVKKNASAQAGCELFLTKPLGIGVLTTAEKKGLLKVEHQNLA
RDVMCQINLIGAQFSQLADVTAMTDVTGFGLLGHLSEICQGSNVRAEVNSAEIHTLDGVKDYIAQGAVPGGTNRNFDSYG
HLISAMSDEQKAILCDPQTSGGLLIAVRPQAVEKVQQIAKQANIPLFRVGRLLEADTMKPLIEVI
>Mature_305_residues
MVGNETADDAAVYDIGNGIGIISTTDFFMPIVDDPFDFGRIAAANALSDVFAMGGKPIMAIAILGFPVNKLPAEVAQKIV
EGGRFACQQAGIALAGGHSIDSPEPIFGLAVTGTVSTEQVKKNASAQAGCELFLTKPLGIGVLTTAEKKGLLKVEHQNLA
RDVMCQINLIGAQFSQLADVTAMTDVTGFGLLGHLSEICQGSNVRAEVNSAEIHTLDGVKDYIAQGAVPGGTNRNFDSYG
HLISAMSDEQKAILCDPQTSGGLLIAVRPQAVEKVQQIAKQANIPLFRVGRLLEADTMKPLIEVI

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=281, Percent_Identity=30.9608540925267, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI15011844, Length=264, Percent_Identity=31.4393939393939, Blast_Score=95, Evalue=9e-20,
Organism=Escherichia coli, GI1788062, Length=304, Percent_Identity=67.4342105263158, Blast_Score=430, Evalue=1e-122,
Organism=Caenorhabditis elegans, GI17543426, Length=295, Percent_Identity=27.7966101694915, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24653602, Length=294, Percent_Identity=30.952380952381, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24653604, Length=294, Percent_Identity=30.952380952381, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 32019; Mature: 32019

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGNETADDAAVYDIGNGIGIISTTDFFMPIVDDPFDFGRIAAANALSDVFAMGGKPIMA
CCCCCCCCCCEEEECCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
IAILGFPVNKLPAEVAQKIVEGGRFACQQAGIALAGGHSIDSPEPIFGLAVTGTVSTEQV
EEEECCCHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCHHHH
KKNASAQAGCELFLTKPLGIGVLTTAEKKGLLKVEHQNLARDVMCQINLIGAQFSQLADV
HHCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEHHHHHHHHHHHHEEEHHHHHHHHHHH
TAMTDVTGFGLLGHLSEICQGSNVRAEVNSAEIHTLDGVKDYIAQGAVPGGTNRNFDSYG
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCHHHHHHCCCCCCCCCCCHHHHH
HLISAMSDEQKAILCDPQTSGGLLIAVRPQAVEKVQQIAKQANIPLFRVGRLLEADTMKP
HHHHHCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIEVI
HHHHC
>Mature Secondary Structure
MVGNETADDAAVYDIGNGIGIISTTDFFMPIVDDPFDFGRIAAANALSDVFAMGGKPIMA
CCCCCCCCCCEEEECCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
IAILGFPVNKLPAEVAQKIVEGGRFACQQAGIALAGGHSIDSPEPIFGLAVTGTVSTEQV
EEEECCCHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCHHHH
KKNASAQAGCELFLTKPLGIGVLTTAEKKGLLKVEHQNLARDVMCQINLIGAQFSQLADV
HHCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEHHHHHHHHHHHHEEEHHHHHHHHHHH
TAMTDVTGFGLLGHLSEICQGSNVRAEVNSAEIHTLDGVKDYIAQGAVPGGTNRNFDSYG
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCHHHHHHCCCCCCCCCCCHHHHH
HLISAMSDEQKAILCDPQTSGGLLIAVRPQAVEKVQQIAKQANIPLFRVGRLLEADTMKP
HHHHHCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIEVI
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA