Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is yfeA [C]
Identifier: 126207760
GI number: 126207760
Start: 300024
End: 300920
Strand: Reverse
Name: yfeA [C]
Synonym: APL_0272
Alternate gene names: 126207760
Gene position: 300920-300024 (Counterclockwise)
Preceding gene: 126207761
Following gene: 126207759
Centisome position: 13.23
GC content: 40.36
Gene sequence:
>897_bases ATGAAACTTTCATTTTTAAAACAAGTATTTGTGGTTGCATTAGGTTTAAGCGCAACACTCGCTATGGCTGCGCCATTCAA AGTCGTCACTACCTTTACCGTGATCCAAGATATTGCGCAAAATGTTGCCGGTGATAAAGCGGTTGTCGAATCCATAACTA AGCCAGGTGCGGAAATTCATGATTACCAACCGACACCGAAAGATATTGCTAAAGCACAAAAAGCGGATCTTATCTTATGG AACGGTATGAATTTAGAACGTTGGTTCGAGCGTTTCTTTGAAAACGTAAAAGGTAAACCGGCAGTTGTGGTGACCGAAGG CATCACACCAATTGCAATTACCGAAGGCGAATATAAAAACTTACCGAATCCGCATGCTTGGATGTCATCGGCTAACGCTT TGCAATATATTGAAAATATTCGCGCCGCATTAGTGAAATACGATCCGAAAAATGCCGAAAGTTATAACCAAAATGCTAAA ATTTATGCAGAAAAAGTAAAAGCCATTGCGGAGCCATTACGCCAACGTCTATCCGTTATTCCAGAAGCACAACGTTGGTT AGTAACCAGTGAAGGGGCATTTAGTTATTTAGCACAAGATTATCAGTTAAAAGAGCTTTATTTATGGGCGATTAATGCCG AAGAGCAAGGCTCGCCGCAACAAGTGAAAAAAGTGATCGATGGCGTAAAAGCCAATAATATTCCCGTTGTTTTCAGCGAA AGTACCGTATCGGATAAACCGGCGAAACAAGTGGCAAAAGAAACCGGTGCATTATACGGCGGTGTGTTATATGTCGATTC ACTTTCAACCAAAGACGGTGCCGTACCAACTTATTTAGATCTATTAAAAGTAACGATCAGTACGATTGTTGACGGTTTTG AAAAAAGTAAAAAATAA
Upstream 100 bases:
>100_bases TGCCGGTTTACCTAAACCCATAAAATGTTTATAATTATTATTAATTGAGATTTATTCTCAATTTCATTCAGAATGAAATT CATGATTAAAAGGAGAAACT
Downstream 100 bases:
>100_bases CATGGTATCCATTCCTACTTCTATTTCCGTTGAAAAGCTAAGTGTCCGTTATAATAACGGGCATTTAGCCTTATATGACG TATCCTTCCAACTGCAAAAC
Product: iron (chelated) ABC transporter, periplasmic-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPKDIAKAQKADLILW NGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKNLPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAK IYAEKVKAIAEPLRQRLSVIPEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK
Sequences:
>Translated_298_residues MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPKDIAKAQKADLILW NGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKNLPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAK IYAEKVKAIAEPLRQRLSVIPEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK >Mature_298_residues MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPKDIAKAQKADLILW NGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKNLPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAK IYAEKVKAIAEPLRQRLSVIPEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK
Specific function: Part of an ATP-driven transport system HI_0359/HI_0360/HI_0361/HI_0362 for iron. Metal-binding component (Potential) [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 32870; Mature: 32870
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIH CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC DYQPTPKDIAKAQKADLILWNGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKN CCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCC LPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAKIYAEKVKAIAEPLRQRLSVI CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC PEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE CCHHHEEEECCCHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEC STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK CCCCCCHHHHHHHHHCCHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIH CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC DYQPTPKDIAKAQKADLILWNGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKN CCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCC LPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAKIYAEKVKAIAEPLRQRLSVI CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC PEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE CCHHHEEEECCCHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEC STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK CCCCCCHHHHHHHHHCCHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 1556062; 10675023 [H]