Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

Click here to switch to the map view.

The map label for this gene is yfeA [C]

Identifier: 126207760

GI number: 126207760

Start: 300024

End: 300920

Strand: Reverse

Name: yfeA [C]

Synonym: APL_0272

Alternate gene names: 126207760

Gene position: 300920-300024 (Counterclockwise)

Preceding gene: 126207761

Following gene: 126207759

Centisome position: 13.23

GC content: 40.36

Gene sequence:

>897_bases
ATGAAACTTTCATTTTTAAAACAAGTATTTGTGGTTGCATTAGGTTTAAGCGCAACACTCGCTATGGCTGCGCCATTCAA
AGTCGTCACTACCTTTACCGTGATCCAAGATATTGCGCAAAATGTTGCCGGTGATAAAGCGGTTGTCGAATCCATAACTA
AGCCAGGTGCGGAAATTCATGATTACCAACCGACACCGAAAGATATTGCTAAAGCACAAAAAGCGGATCTTATCTTATGG
AACGGTATGAATTTAGAACGTTGGTTCGAGCGTTTCTTTGAAAACGTAAAAGGTAAACCGGCAGTTGTGGTGACCGAAGG
CATCACACCAATTGCAATTACCGAAGGCGAATATAAAAACTTACCGAATCCGCATGCTTGGATGTCATCGGCTAACGCTT
TGCAATATATTGAAAATATTCGCGCCGCATTAGTGAAATACGATCCGAAAAATGCCGAAAGTTATAACCAAAATGCTAAA
ATTTATGCAGAAAAAGTAAAAGCCATTGCGGAGCCATTACGCCAACGTCTATCCGTTATTCCAGAAGCACAACGTTGGTT
AGTAACCAGTGAAGGGGCATTTAGTTATTTAGCACAAGATTATCAGTTAAAAGAGCTTTATTTATGGGCGATTAATGCCG
AAGAGCAAGGCTCGCCGCAACAAGTGAAAAAAGTGATCGATGGCGTAAAAGCCAATAATATTCCCGTTGTTTTCAGCGAA
AGTACCGTATCGGATAAACCGGCGAAACAAGTGGCAAAAGAAACCGGTGCATTATACGGCGGTGTGTTATATGTCGATTC
ACTTTCAACCAAAGACGGTGCCGTACCAACTTATTTAGATCTATTAAAAGTAACGATCAGTACGATTGTTGACGGTTTTG
AAAAAAGTAAAAAATAA

Upstream 100 bases:

>100_bases
TGCCGGTTTACCTAAACCCATAAAATGTTTATAATTATTATTAATTGAGATTTATTCTCAATTTCATTCAGAATGAAATT
CATGATTAAAAGGAGAAACT

Downstream 100 bases:

>100_bases
CATGGTATCCATTCCTACTTCTATTTCCGTTGAAAAGCTAAGTGTCCGTTATAATAACGGGCATTTAGCCTTATATGACG
TATCCTTCCAACTGCAAAAC

Product: iron (chelated) ABC transporter, periplasmic-binding protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPKDIAKAQKADLILW
NGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKNLPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAK
IYAEKVKAIAEPLRQRLSVIPEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE
STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK

Sequences:

>Translated_298_residues
MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPKDIAKAQKADLILW
NGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKNLPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAK
IYAEKVKAIAEPLRQRLSVIPEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE
STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK
>Mature_298_residues
MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPKDIAKAQKADLILW
NGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKNLPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAK
IYAEKVKAIAEPLRQRLSVIPEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE
STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK

Specific function: Part of an ATP-driven transport system HI_0359/HI_0360/HI_0361/HI_0362 for iron. Metal-binding component (Potential) [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 32870; Mature: 32870

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIH
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
DYQPTPKDIAKAQKADLILWNGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKN
CCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCC
LPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAKIYAEKVKAIAEPLRQRLSVI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC
PEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE
CCHHHEEEECCCHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEC
STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK
CCCCCCHHHHHHHHHCCHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLSFLKQVFVVALGLSATLAMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIH
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
DYQPTPKDIAKAQKADLILWNGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKN
CCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCC
LPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAKIYAEKVKAIAEPLRQRLSVI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC
PEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE
CCHHHEEEECCCHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEC
STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK
CCCCCCHHHHHHHHHCCHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 1556062; 10675023 [H]