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The map label for this gene is yadH [H]

Identifier: 126207751

GI number: 126207751

Start: 292023

End: 292784

Strand: Reverse

Name: yadH [H]

Synonym: APL_0263

Alternate gene names: 126207751

Gene position: 292784-292023 (Counterclockwise)

Preceding gene: 126207752

Following gene: 126207750

Centisome position: 12.87

GC content: 42.13

Gene sequence:

>762_bases
ATGAATTTAACTGGATTTTTTACCCTTTCCGCCAAGGAATCTCGCCGCATTATTCGTATTTGGCGACAAACGCTTGTTCC
GCCGATTATTACCACCACACTCTATTTTCTGATTTTCGGTAAACTGATCGGCGGTCGTATCGGTGAAATGAACGGGGTCG
GTTATATGCAATTTATTGCACCGGGACTAGTTATGATGAATGCGATTACCGCTTCTTACGTGAATACCGCTTCGTCTTTT
TTCCTCAGTAAATTTACCCGTAATTTTGAAGAATTACTGGTTTCTCCGCTCTCTACACATAATATTATTTGGGGTTATGT
GATGGGGAGTATCGTACGAGGCGGCTTAGCCGGCATCTTAGTCATGTTAGTCGCGCTTTGCTTCGTTTCGTTTGATATTC
ACTCGTGGACGATTATTTTACTGACCTTGTTAATGACAACCGTGGCTTTTGCGCTCGGCGGATTAATTAATGCGGTATAT
GCCAAATCCTTTGATGATGTCGGCTTAATTCCGACTTTCGTACTTACACCGCTCACTTATTTAGGCGGTGTTTTTTACTC
TATTTCACTTTTACCGGAGTTTTGGCAAACCGTCTCCAAATTCAATCCGATTGTGTATATGATTAACGGCTTCCGTTACG
GTTTTTTAGGTATTAGTGATGTGTCGGTGTCCTATACGTTTGTGGTGTTAATCTCATTTATTACCGTGCTATACTATATC
GCCTTTTCATTGATTGAGAAGGGCGTCGGGCTTCGTAGCTGA

Upstream 100 bases:

>100_bases
TCTGTTCCATCAAATCGCACAACAAGATGTCGAAGTGCTTAGTATGCGCAACAAGTCTAACCGTCTTGAAGAACTCTTTA
TGAAAATGGCAAATTAATAT

Downstream 100 bases:

>100_bases
TTTTCTTTGCCAAGGATAACACGAGAGATATTTGCTAAAGTCAGCGAAAAACCGACCGCTTGCTCTCGTGTTAAACGTTT
TAAAGGAATTTCAATATGAA

Product: putative ABC transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNLTGFFTLSAKESRRIIRIWRQTLVPPIITTTLYFLIFGKLIGGRIGEMNGVGYMQFIAPGLVMMNAITASYVNTASSF
FLSKFTRNFEELLVSPLSTHNIIWGYVMGSIVRGGLAGILVMLVALCFVSFDIHSWTIILLTLLMTTVAFALGGLINAVY
AKSFDDVGLIPTFVLTPLTYLGGVFYSISLLPEFWQTVSKFNPIVYMINGFRYGFLGISDVSVSYTFVVLISFITVLYYI
AFSLIEKGVGLRS

Sequences:

>Translated_253_residues
MNLTGFFTLSAKESRRIIRIWRQTLVPPIITTTLYFLIFGKLIGGRIGEMNGVGYMQFIAPGLVMMNAITASYVNTASSF
FLSKFTRNFEELLVSPLSTHNIIWGYVMGSIVRGGLAGILVMLVALCFVSFDIHSWTIILLTLLMTTVAFALGGLINAVY
AKSFDDVGLIPTFVLTPLTYLGGVFYSISLLPEFWQTVSKFNPIVYMINGFRYGFLGISDVSVSYTFVVLISFITVLYYI
AFSLIEKGVGLRS
>Mature_253_residues
MNLTGFFTLSAKESRRIIRIWRQTLVPPIITTTLYFLIFGKLIGGRIGEMNGVGYMQFIAPGLVMMNAITASYVNTASSF
FLSKFTRNFEELLVSPLSTHNIIWGYVMGSIVRGGLAGILVMLVALCFVSFDIHSWTIILLTLLMTTVAFALGGLINAVY
AKSFDDVGLIPTFVLTPLTYLGGVFYSISLLPEFWQTVSKFNPIVYMINGFRYGFLGISDVSVSYTFVVLISFITVLYYI
AFSLIEKGVGLRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=243, Percent_Identity=63.7860082304527, Blast_Score=315, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28088; Mature: 28088

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTGFFTLSAKESRRIIRIWRQTLVPPIITTTLYFLIFGKLIGGRIGEMNGVGYMQFIA
CCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
PGLVMMNAITASYVNTASSFFLSKFTRNFEELLVSPLSTHNIIWGYVMGSIVRGGLAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VMLVALCFVSFDIHSWTIILLTLLMTTVAFALGGLINAVYAKSFDDVGLIPTFVLTPLTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LGGVFYSISLLPEFWQTVSKFNPIVYMINGFRYGFLGISDVSVSYTFVVLISFITVLYYI
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECEEECHHHHHHHHHHHHHHHHHHHHH
AFSLIEKGVGLRS
HHHHHHHCCCCCC
>Mature Secondary Structure
MNLTGFFTLSAKESRRIIRIWRQTLVPPIITTTLYFLIFGKLIGGRIGEMNGVGYMQFIA
CCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
PGLVMMNAITASYVNTASSFFLSKFTRNFEELLVSPLSTHNIIWGYVMGSIVRGGLAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VMLVALCFVSFDIHSWTIILLTLLMTTVAFALGGLINAVYAKSFDDVGLIPTFVLTPLTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LGGVFYSISLLPEFWQTVSKFNPIVYMINGFRYGFLGISDVSVSYTFVVLISFITVLYYI
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECEEECHHHHHHHHHHHHHHHHHHHHH
AFSLIEKGVGLRS
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]