Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is yfjG [C]
Identifier: 126207747
GI number: 126207747
Start: 288879
End: 289313
Strand: Reverse
Name: yfjG [C]
Synonym: APL_0259
Alternate gene names: 126207747
Gene position: 289313-288879 (Counterclockwise)
Preceding gene: 126207748
Following gene: 126207746
Centisome position: 12.72
GC content: 39.08
Gene sequence:
>435_bases ATGCCTATTGTCAATCAATCTTCGCTTGTGCCTTATAGCGCCGAGCAAATGTATCAACTCGTAAACGATTACGAAAAATA TCCGCAGTTTTTATCCGGCTGTATCGGTGCCAAAACCATTAGTCGCGGAAATAATGAGCTTGAAGCCGAATTACAAATTC AAAAGTTAGGTATCAGTCAAAGTTTTAGCACACATAATAAAATGCTCCCTAACGAACGGATCGAAATGAAATTGGTTAAT GGTCCGTTTCGACAATTGCAAGGCGCTTGGAACTTTCAGCCGTTTGACGAGCAAAGCTGTAAAATATCGCTTTATTTAGA ATTTGAATTTTCAAATCCTGTCGTGGGAATGGTATTCGGCAAAATATTTAATGAGCTGACGTTAAAAATGGTCAATGCTT TTAAACAACGCGCAAAAGAGGTGTACGGTGTCTGA
Upstream 100 bases:
>100_bases CATTAAAAAACGGGCAAAATGTATATCTTCAAATCAAAAGCGTTTCTTTATAGCAATACAAAAATTTAGTAAAATAAGAC CGCTTACAAAGAGAAAGAAT
Downstream 100 bases:
>100_bases TATAGAGAAAATCGAAGTAGAAGTGCTTTTTGCCTATCCGAATAAACATTTTTTAAAAAAAATCACATTAGATGCGCCTA CTAGTGTACAAAATGTGATT
Product: oligoketide cyclase/lipid transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQSFSTHNKMLPNERIEMKLVN GPFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFGKIFNELTLKMVNAFKQRAKEVYGV
Sequences:
>Translated_144_residues MPIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQSFSTHNKMLPNERIEMKLVN GPFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFGKIFNELTLKMVNAFKQRAKEVYGV >Mature_143_residues PIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQSFSTHNKMLPNERIEMKLVNG PFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFGKIFNELTLKMVNAFKQRAKEVYGV
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=142, Percent_Identity=47.887323943662, Blast_Score=164, Evalue=3e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16513; Mature: 16382
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC SFSTHNKMLPNERIEMKLVNGPFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFG CCCHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH KIFNELTLKMVNAFKQRAKEVYGV HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC SFSTHNKMLPNERIEMKLVNGPFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFG CCCHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH KIFNELTLKMVNAFKQRAKEVYGV HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA