The gene/protein map for NC_002944 is currently unavailable.
Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

Click here to switch to the map view.

The map label for this gene is yfjG [C]

Identifier: 126207747

GI number: 126207747

Start: 288879

End: 289313

Strand: Reverse

Name: yfjG [C]

Synonym: APL_0259

Alternate gene names: 126207747

Gene position: 289313-288879 (Counterclockwise)

Preceding gene: 126207748

Following gene: 126207746

Centisome position: 12.72

GC content: 39.08

Gene sequence:

>435_bases
ATGCCTATTGTCAATCAATCTTCGCTTGTGCCTTATAGCGCCGAGCAAATGTATCAACTCGTAAACGATTACGAAAAATA
TCCGCAGTTTTTATCCGGCTGTATCGGTGCCAAAACCATTAGTCGCGGAAATAATGAGCTTGAAGCCGAATTACAAATTC
AAAAGTTAGGTATCAGTCAAAGTTTTAGCACACATAATAAAATGCTCCCTAACGAACGGATCGAAATGAAATTGGTTAAT
GGTCCGTTTCGACAATTGCAAGGCGCTTGGAACTTTCAGCCGTTTGACGAGCAAAGCTGTAAAATATCGCTTTATTTAGA
ATTTGAATTTTCAAATCCTGTCGTGGGAATGGTATTCGGCAAAATATTTAATGAGCTGACGTTAAAAATGGTCAATGCTT
TTAAACAACGCGCAAAAGAGGTGTACGGTGTCTGA

Upstream 100 bases:

>100_bases
CATTAAAAAACGGGCAAAATGTATATCTTCAAATCAAAAGCGTTTCTTTATAGCAATACAAAAATTTAGTAAAATAAGAC
CGCTTACAAAGAGAAAGAAT

Downstream 100 bases:

>100_bases
TATAGAGAAAATCGAAGTAGAAGTGCTTTTTGCCTATCCGAATAAACATTTTTTAAAAAAAATCACATTAGATGCGCCTA
CTAGTGTACAAAATGTGATT

Product: oligoketide cyclase/lipid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MPIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQSFSTHNKMLPNERIEMKLVN
GPFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFGKIFNELTLKMVNAFKQRAKEVYGV

Sequences:

>Translated_144_residues
MPIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQSFSTHNKMLPNERIEMKLVN
GPFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFGKIFNELTLKMVNAFKQRAKEVYGV
>Mature_143_residues
PIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQSFSTHNKMLPNERIEMKLVNG
PFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFGKIFNELTLKMVNAFKQRAKEVYGV

Specific function: Unknown

COG id: COG2867

COG function: function code I; Oligoketide cyclase/lipid transport protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0083 family [H]

Homologues:

Organism=Escherichia coli, GI1788972, Length=142, Percent_Identity=47.887323943662, Blast_Score=164, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005031 [H]

Pfam domain/function: PF03364 Polyketide_cyc [H]

EC number: NA

Molecular weight: Translated: 16513; Mature: 16382

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
SFSTHNKMLPNERIEMKLVNGPFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFG
CCCHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH
KIFNELTLKMVNAFKQRAKEVYGV
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PIVNQSSLVPYSAEQMYQLVNDYEKYPQFLSGCIGAKTISRGNNELEAELQIQKLGISQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
SFSTHNKMLPNERIEMKLVNGPFRQLQGAWNFQPFDEQSCKISLYLEFEFSNPVVGMVFG
CCCHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH
KIFNELTLKMVNAFKQRAKEVYGV
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA