Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is secA
Identifier: 126207727
GI number: 126207727
Start: 255285
End: 258002
Strand: Direct
Name: secA
Synonym: APL_0239
Alternate gene names: 126207727
Gene position: 255285-258002 (Clockwise)
Preceding gene: 126207726
Following gene: 126207728
Centisome position: 11.22
GC content: 44.85
Gene sequence:
>2718_bases ATGATTTCAAAAATTATCACTTCGATTTTCGGTTCAAGCAACGATCGTACTTTAAAACGTTTAAGAAAGCGCGTGGCGCA AATTAATAAACTTGAACCGGCATTTGAAAAATTAACCGATGAAGAATTACAAGCGAAAACGGCGGAGTTTAAGCAGCGCT TAGCTGACGGTGCCAGCCTTGACAGTTTATTGCACGAAGCGTTTGCAACCGTGCGTGAGGCAAGCCGCCGTGTAATGGGA ATGCGCCATTTTGACGTGCAATTAATCGGCGGTATGGTATTAACTAACCGTAATATCGCCGAGATGCGTACCGGTGAAGG TAAAACTTTAACCGCAACATTGCCTTGCTACTTAAATGCACTGACAGGTAAAGGCGTTCACGTTGTAACGGTGAACGATT ATCTCGCACGCCGTGATGCGGAAACCAACCGCCCGTTATTTGAGTTTTTAGGTTTAAGCGTAGCGGTAAACGTGCCGGGG CTTCCGAATGAAGTAAAACGTGAAGCCTATAAAGCGGATATTACTTATTCAACCAATAGTGAGTTGGGTTTCGATTACTT ACGCGATAACCTTGCGCACGCCAAAGAAGACCGTTTCCAACGCGAATTACACTATGCGTTGGTGGACGAGGTGGACTCGA TCTTAATTGATGAAGCGCGTACGCCGTTAATTATTTCCGGTCCGGCGGAAGATGCGACGCAAATCTATCAAGCGATCGAT ACGATTATTCCGCACTTGGTTCAGCAAGATAAAGAAGACACCGAAGAATATACCGGTGAAGGCGATTTCACTTTAGATCT AAAAAATAAACAAGCGCATTTAACCGAACGCGGTATGGTGAAAGTGGAAGGTATTTTGACCGAAATGGGCTTAATGCAAG AGGGCGAAACGCTTTATCATCCGGCCCGTATCGCTTTATTACACCACGTTTATGCGGCGTTACGTGCGCATAAATTATTT GAATTAAACGTGGACTACATTGTAAAAGACGGTGAAGTGGTGATCATCGACGAGCATACCGGTCGTACTATGGCGGGTCG CCGTTGGTCTGACGGTTTACACCAAGCGATTGAAGCGAAAGAAAAAGTTAATATTCAAGGCGAGAACCAAACGGTTGCGT CTATCACTTACCAAAACTATTTCCGTCTATACGAAAAATTAGCCGGTATGACCGGTACGGCGGATACGGAAGCGTTTGAA TTCCAACAAATTTACGGTTTGGATACGATTGTGATTCCGACCAATAAACCGGTAATTCGTGACGACCGTACCGACTTAAT GTTTAAGAGCGAACCGGAAAAATTTGCCGCAATTATCAAAGATATTCAAGAATGTATGGCTCGCCAACAACCGGTATTGG TCGGTACCGCATCGGTTGAGAAATCAGAACTTTTATCGGCGGAATTAACCAAAGCCGGTATCGCTCATAACGTATTAAAT GCGAAATTCCACGCACAAGAAGCGGAAATCGTAGCCGAAGCCGGCGCGCCGGGTGCGGTAACCATAGCAACCAATATGGC GGGGCGTGGTACGGATATCGTGTTAGGCGGTAACTGGAAAGCGGAAATTGCGAAGTTGGAAAATCCGACCGAAGAGCAAA TCGAAGCGATTAAAGCGGCATGGAAAGAACGTTATGACATTGTGATGAAGGCGGGCGGTTTACATATTATCGGTACCGAG CGTCACGAATCTCGCCGTATTGACAATCAGTTGCGCGGTCGTTCCGGTCGTCAAGGCGATCCGGGTTCATCGCGTTTCTA CCTGTCTTTAGACGATGCGTTAATGCGTATTTACCTGAATGAGGGTAAATTGAATATGATGCGTAAAGCCTTCTCTGAAG AAGGTGAGGCGATGGAGTCAAAATTACTGACTAAAGTGATCGCATCTGCACAAGCGAAAGTGGAAGCGCACAACTTTGAC GGTCGTAAAAACTTATTACAATACGACGATGTTGCGAACGAACAGCGTAAAGCGATTTACGAACAGCGTAATTACTTGCT TGAAACCGAAGATATTTCCGCCATGATTGAAACCATTCGCGGCGATGTGTTCAATCGTGTTATCGACCAATTTATTCCAC CGCAATCTATCGAAGAAATGTGGGATGTTGCCGGTTTAGAAGAAGCGTTAAAACGTCAATTCGGTATGGAACTGCCTATC CAGCATTGGTTAGAGCAAGAAAATGACTTACACGAAGAAACGTTACGTGAGCGTATTATTGATATTGCGACACAAGAGTA CCACGCAAAAGAAGAGAAAGTCGGCTCGGAAGTGATGCGCAACTTCGAAAAAGGCGTGATGTTACAAAACTTGGATGAGC TTTGGAAAGAACATCTTTCGGCAATGGATTATTTACGTAAAGGGATTCACTTACGCGGTTATGCACAAAAAGATCCGAAA CAAGAGTATAAGAAAGAATCATTTGAAATGTTTACTAATATGCTCGATTTGTTGAAATCTAACGTAATTAGCGTGTTAAG CCGTATTCAAGTACGCAGTCAAGAAGAAATCGAAGAAGCGCAACGTCAGCAAGAAGCGATGGCGCAAGCGGAGTCGGAAA ACTATCGTACGGCTGATCATCAGGCGGAAGCTCAACAATCGGAGTCTTTGACCGAAGAGCAGTTAGCAAATTTGGATATC GGTCGCAATGATCCTTGCCCTTGCGGCTCCGGCAAAAAATACAAACATTGCCACGGCAGTAAAGCAAGATATGCGTAA
Upstream 100 bases:
>100_bases TTTTATTCGCTACGGAACACAAAGAGAGAAGCGTTTCTTCGTATCGTTGTGCGTATTCCGTATTTCTCACATTAAAAATA ATCAGATTAGGACAAAAATA
Downstream 100 bases:
>100_bases TTAGTCTAAGCGGTAGTTTTTTCTGAATTTTTGCAAAATTTCCTGAAAAAATGACCGCTTTTCTTTTATGAGGTATCAAT TCGAGCCGGTTTCTCTTTAT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 905; Mature: 905
Protein sequence:
>905_residues MISKIITSIFGSSNDRTLKRLRKRVAQINKLEPAFEKLTDEELQAKTAEFKQRLADGASLDSLLHEAFATVREASRRVMG MRHFDVQLIGGMVLTNRNIAEMRTGEGKTLTATLPCYLNALTGKGVHVVTVNDYLARRDAETNRPLFEFLGLSVAVNVPG LPNEVKREAYKADITYSTNSELGFDYLRDNLAHAKEDRFQRELHYALVDEVDSILIDEARTPLIISGPAEDATQIYQAID TIIPHLVQQDKEDTEEYTGEGDFTLDLKNKQAHLTERGMVKVEGILTEMGLMQEGETLYHPARIALLHHVYAALRAHKLF ELNVDYIVKDGEVVIIDEHTGRTMAGRRWSDGLHQAIEAKEKVNIQGENQTVASITYQNYFRLYEKLAGMTGTADTEAFE FQQIYGLDTIVIPTNKPVIRDDRTDLMFKSEPEKFAAIIKDIQECMARQQPVLVGTASVEKSELLSAELTKAGIAHNVLN AKFHAQEAEIVAEAGAPGAVTIATNMAGRGTDIVLGGNWKAEIAKLENPTEEQIEAIKAAWKERYDIVMKAGGLHIIGTE RHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDALMRIYLNEGKLNMMRKAFSEEGEAMESKLLTKVIASAQAKVEAHNFD GRKNLLQYDDVANEQRKAIYEQRNYLLETEDISAMIETIRGDVFNRVIDQFIPPQSIEEMWDVAGLEEALKRQFGMELPI QHWLEQENDLHEETLRERIIDIATQEYHAKEEKVGSEVMRNFEKGVMLQNLDELWKEHLSAMDYLRKGIHLRGYAQKDPK QEYKKESFEMFTNMLDLLKSNVISVLSRIQVRSQEEIEEAQRQQEAMAQAESENYRTADHQAEAQQSESLTEEQLANLDI GRNDPCPCGSGKKYKHCHGSKARYA
Sequences:
>Translated_905_residues MISKIITSIFGSSNDRTLKRLRKRVAQINKLEPAFEKLTDEELQAKTAEFKQRLADGASLDSLLHEAFATVREASRRVMG MRHFDVQLIGGMVLTNRNIAEMRTGEGKTLTATLPCYLNALTGKGVHVVTVNDYLARRDAETNRPLFEFLGLSVAVNVPG LPNEVKREAYKADITYSTNSELGFDYLRDNLAHAKEDRFQRELHYALVDEVDSILIDEARTPLIISGPAEDATQIYQAID TIIPHLVQQDKEDTEEYTGEGDFTLDLKNKQAHLTERGMVKVEGILTEMGLMQEGETLYHPARIALLHHVYAALRAHKLF ELNVDYIVKDGEVVIIDEHTGRTMAGRRWSDGLHQAIEAKEKVNIQGENQTVASITYQNYFRLYEKLAGMTGTADTEAFE FQQIYGLDTIVIPTNKPVIRDDRTDLMFKSEPEKFAAIIKDIQECMARQQPVLVGTASVEKSELLSAELTKAGIAHNVLN AKFHAQEAEIVAEAGAPGAVTIATNMAGRGTDIVLGGNWKAEIAKLENPTEEQIEAIKAAWKERYDIVMKAGGLHIIGTE RHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDALMRIYLNEGKLNMMRKAFSEEGEAMESKLLTKVIASAQAKVEAHNFD GRKNLLQYDDVANEQRKAIYEQRNYLLETEDISAMIETIRGDVFNRVIDQFIPPQSIEEMWDVAGLEEALKRQFGMELPI QHWLEQENDLHEETLRERIIDIATQEYHAKEEKVGSEVMRNFEKGVMLQNLDELWKEHLSAMDYLRKGIHLRGYAQKDPK QEYKKESFEMFTNMLDLLKSNVISVLSRIQVRSQEEIEEAQRQQEAMAQAESENYRTADHQAEAQQSESLTEEQLANLDI GRNDPCPCGSGKKYKHCHGSKARYA >Mature_905_residues MISKIITSIFGSSNDRTLKRLRKRVAQINKLEPAFEKLTDEELQAKTAEFKQRLADGASLDSLLHEAFATVREASRRVMG MRHFDVQLIGGMVLTNRNIAEMRTGEGKTLTATLPCYLNALTGKGVHVVTVNDYLARRDAETNRPLFEFLGLSVAVNVPG LPNEVKREAYKADITYSTNSELGFDYLRDNLAHAKEDRFQRELHYALVDEVDSILIDEARTPLIISGPAEDATQIYQAID TIIPHLVQQDKEDTEEYTGEGDFTLDLKNKQAHLTERGMVKVEGILTEMGLMQEGETLYHPARIALLHHVYAALRAHKLF ELNVDYIVKDGEVVIIDEHTGRTMAGRRWSDGLHQAIEAKEKVNIQGENQTVASITYQNYFRLYEKLAGMTGTADTEAFE FQQIYGLDTIVIPTNKPVIRDDRTDLMFKSEPEKFAAIIKDIQECMARQQPVLVGTASVEKSELLSAELTKAGIAHNVLN AKFHAQEAEIVAEAGAPGAVTIATNMAGRGTDIVLGGNWKAEIAKLENPTEEQIEAIKAAWKERYDIVMKAGGLHIIGTE RHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDALMRIYLNEGKLNMMRKAFSEEGEAMESKLLTKVIASAQAKVEAHNFD GRKNLLQYDDVANEQRKAIYEQRNYLLETEDISAMIETIRGDVFNRVIDQFIPPQSIEEMWDVAGLEEALKRQFGMELPI QHWLEQENDLHEETLRERIIDIATQEYHAKEEKVGSEVMRNFEKGVMLQNLDELWKEHLSAMDYLRKGIHLRGYAQKDPK QEYKKESFEMFTNMLDLLKSNVISVLSRIQVRSQEEIEEAQRQQEAMAQAESENYRTADHQAEAQQSESLTEEQLANLDI GRNDPCPCGSGKKYKHCHGSKARYA
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family
Homologues:
Organism=Escherichia coli, GI1786287, Length=899, Percent_Identity=68.0756395995551, Blast_Score=1282, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SECA_ACTP2 (A3MYW1)
Other databases:
- EMBL: CP000569 - RefSeq: YP_001052952.1 - ProteinModelPortal: A3MYW1 - SMR: A3MYW1 - STRING: A3MYW1 - GeneID: 4849668 - GenomeReviews: CP000569_GR - KEGG: apl:APL_0239 - eggNOG: COG0653 - HOGENOM: HBG284200 - OMA: GGMVLHD - PhylomeDB: A3MYW1 - ProtClustDB: PRK12904 - BioCyc: APLE416269:APL_0239-MONOMER - GO: GO:0005737 - HAMAP: MF_01382 - InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 - Gene3D: G3DSA:1.10.3060.10 - PRINTS: PR00906 - SMART: SM00957 - SMART: SM00958 - TIGRFAMs: TIGR00963
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW; SSF81767 SecA_PP_bd; SSF81886 SecA_SW
EC number: NA
Molecular weight: Translated: 102497; Mature: 102497
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS01312 SECA; PS51196 SECA_MOTOR_DEAD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKIITSIFGSSNDRTLKRLRKRVAQINKLEPAFEKLTDEELQAKTAEFKQRLADGASL CHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHCCCHH DSLLHEAFATVREASRRVMGMRHFDVQLIGGMVLTNRNIAEMRTGEGKTLTATLPCYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCHHHHCCCCCCEEEEEHHHHHHH LTGKGVHVVTVNDYLARRDAETNRPLFEFLGLSVAVNVPGLPNEVKREAYKADITYSTNS HCCCCEEEEEECHHHHHCCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHCCEEECCCC ELGFDYLRDNLAHAKEDRFQRELHYALVDEVDSILIDEARTPLIISGPAEDATQIYQAID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH TIIPHLVQQDKEDTEEYTGEGDFTLDLKNKQAHLTERGMVKVEGILTEMGLMQEGETLYH HHHHHHHHCCHHHHHHHCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH PARIALLHHVYAALRAHKLFELNVDYIVKDGEVVIIDEHTGRTMAGRRWSDGLHQAIEAK HHHHHHHHHHHHHHHHHHHEEECCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHH EKVNIQGENQTVASITYQNYFRLYEKLAGMTGTADTEAFEFQQIYGLDTIVIPTNKPVIR HHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCC DDRTDLMFKSEPEKFAAIIKDIQECMARQQPVLVGTASVEKSELLSAELTKAGIAHNVLN CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH AKFHAQEAEIVAEAGAPGAVTIATNMAGRGTDIVLGGNWKAEIAKLENPTEEQIEAIKAA HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHH WKERYDIVMKAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDALMRIYLN HHHHHHHEEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHC EGKLNMMRKAFSEEGEAMESKLLTKVIASAQAKVEAHNFDGRKNLLQYDDVANEQRKAIY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCHHHHHHH EQRNYLLETEDISAMIETIRGDVFNRVIDQFIPPQSIEEMWDVAGLEEALKRQFGMELPI HHHHCEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH QHWLEQENDLHEETLRERIIDIATQEYHAKEEKVGSEVMRNFEKGVMLQNLDELWKEHLS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AMDYLRKGIHLRGYAQKDPKQEYKKESFEMFTNMLDLLKSNVISVLSRIQVRSQEEIEEA HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QRQQEAMAQAESENYRTADHQAEAQQSESLTEEQLANLDIGRNDPCPCGSGKKYKHCHGS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC KARYA CCCCC >Mature Secondary Structure MISKIITSIFGSSNDRTLKRLRKRVAQINKLEPAFEKLTDEELQAKTAEFKQRLADGASL CHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHCCCHH DSLLHEAFATVREASRRVMGMRHFDVQLIGGMVLTNRNIAEMRTGEGKTLTATLPCYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCHHHHCCCCCCEEEEEHHHHHHH LTGKGVHVVTVNDYLARRDAETNRPLFEFLGLSVAVNVPGLPNEVKREAYKADITYSTNS HCCCCEEEEEECHHHHHCCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHCCEEECCCC ELGFDYLRDNLAHAKEDRFQRELHYALVDEVDSILIDEARTPLIISGPAEDATQIYQAID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH TIIPHLVQQDKEDTEEYTGEGDFTLDLKNKQAHLTERGMVKVEGILTEMGLMQEGETLYH HHHHHHHHCCHHHHHHHCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH PARIALLHHVYAALRAHKLFELNVDYIVKDGEVVIIDEHTGRTMAGRRWSDGLHQAIEAK HHHHHHHHHHHHHHHHHHHEEECCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHH EKVNIQGENQTVASITYQNYFRLYEKLAGMTGTADTEAFEFQQIYGLDTIVIPTNKPVIR HHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCC DDRTDLMFKSEPEKFAAIIKDIQECMARQQPVLVGTASVEKSELLSAELTKAGIAHNVLN CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH AKFHAQEAEIVAEAGAPGAVTIATNMAGRGTDIVLGGNWKAEIAKLENPTEEQIEAIKAA HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHH WKERYDIVMKAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDALMRIYLN HHHHHHHEEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHC EGKLNMMRKAFSEEGEAMESKLLTKVIASAQAKVEAHNFDGRKNLLQYDDVANEQRKAIY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCHHHHHHH EQRNYLLETEDISAMIETIRGDVFNRVIDQFIPPQSIEEMWDVAGLEEALKRQFGMELPI HHHHCEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH QHWLEQENDLHEETLRERIIDIATQEYHAKEEKVGSEVMRNFEKGVMLQNLDELWKEHLS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AMDYLRKGIHLRGYAQKDPKQEYKKESFEMFTNMLDLLKSNVISVLSRIQVRSQEEIEEA HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QRQQEAMAQAESENYRTADHQAEAQQSESLTEEQLANLDIGRNDPCPCGSGKKYKHCHGS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC KARYA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA