Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is 126207622
Identifier: 126207622
GI number: 126207622
Start: 149191
End: 149835
Strand: Direct
Name: 126207622
Synonym: APL_0134
Alternate gene names: NA
Gene position: 149191-149835 (Clockwise)
Preceding gene: 126207621
Following gene: 126207624
Centisome position: 6.56
GC content: 36.12
Gene sequence:
>645_bases ATGGGATTTATTAAAAAAATCGCACTTTCGTTTGTTGCAATTTTTGCATTAATTTCAACCGCTTGGGCGGATGATTTTAA TATAAAATATAGTTCTAATTACCTAATGCCGGCTTATGTGCATTTTAAAAACGGCGGCGGTCAATATTCGATTCAATCGA AAATTAACGTGCCGTTATATAACATTGTTTTTTCAGCGAAAGGCACGGAGCGTAACGGTCAATTTAATATGTTGAGCTAT CGCGATACGCGTAACGGCAAAACTTACGCCTTAGCTGAAATTGATTCCAGTACGGTGAAGTACGGCAAAGCGAAAGATCC GTTAAAACAAGAGGCATTAACTATGCCGACATTCGATTTATTTACCACCGCATTTCAGTTAAGTTATTACGATCAATTAC CGACAAGTTTCCAAACGACCAACGGTAAGAAATTATATCCGACACCGAATGTAAAATTGCATAAAGTACAAAAAGCGGTA ACGGTAAAAGGTCAAACTTATCAAGAAATTACTTATAGTTTTAAAACCAGTGATCACAAAGCGATTACCGTGAAAAAATA CGTAGGTGAAAAATTCCCTCGTTATATTTCATATAATCGTGACGGTGATAACTACGAGCTAACCTTTGATAGCTTTGTAA AATAG
Upstream 100 bases:
>100_bases GCCGCATTTAACAAAGATGCAAGTAGAGAAAGCGGAACAATTAAGAGAGAGCAATGCTATTCTTCGTTTGTTCGAAAGCA CTAAATTAGAGGAAAAATAG
Downstream 100 bases:
>100_bases GCGACGGTTACAAAAAGACAAGCGGTCTATTTTTCGCAATTTTTTGCAAGAAATAGACCGCTTGCTTTTATGGCTGAAAA CTAGAAGTCTTCAAAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MGFIKKIALSFVAIFALISTAWADDFNIKYSSNYLMPAYVHFKNGGGQYSIQSKINVPLYNIVFSAKGTERNGQFNMLSY RDTRNGKTYALAEIDSSTVKYGKAKDPLKQEALTMPTFDLFTTAFQLSYYDQLPTSFQTTNGKKLYPTPNVKLHKVQKAV TVKGQTYQEITYSFKTSDHKAITVKKYVGEKFPRYISYNRDGDNYELTFDSFVK
Sequences:
>Translated_214_residues MGFIKKIALSFVAIFALISTAWADDFNIKYSSNYLMPAYVHFKNGGGQYSIQSKINVPLYNIVFSAKGTERNGQFNMLSY RDTRNGKTYALAEIDSSTVKYGKAKDPLKQEALTMPTFDLFTTAFQLSYYDQLPTSFQTTNGKKLYPTPNVKLHKVQKAV TVKGQTYQEITYSFKTSDHKAITVKKYVGEKFPRYISYNRDGDNYELTFDSFVK >Mature_213_residues GFIKKIALSFVAIFALISTAWADDFNIKYSSNYLMPAYVHFKNGGGQYSIQSKINVPLYNIVFSAKGTERNGQFNMLSYR DTRNGKTYALAEIDSSTVKYGKAKDPLKQEALTMPTFDLFTTAFQLSYYDQLPTSFQTTNGKKLYPTPNVKLHKVQKAVT VKGQTYQEITYSFKTSDHKAITVKKYVGEKFPRYISYNRDGDNYELTFDSFVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24445; Mature: 24314
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFIKKIALSFVAIFALISTAWADDFNIKYSSNYLMPAYVHFKNGGGQYSIQSKINVPLY CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEEECCCCEEEEEEECCCCEE NIVFSAKGTERNGQFNMLSYRDTRNGKTYALAEIDSSTVKYGKAKDPLKQEALTMPTFDL EEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCEECCCCCCCHHHHHHCCCCHHH FTTAFQLSYYDQLPTSFQTTNGKKLYPTPNVKLHKVQKAVTVKGQTYQEITYSFKTSDHK HHHHHHHHHHHHCCCCEECCCCCEECCCCCCEEEEEEEEEEECCCCHHHEEEEEECCCCE AITVKKYVGEKFPRYISYNRDGDNYELTFDSFVK EEEEHHHHCCCCCHHEEECCCCCCEEEEHHHHCC >Mature Secondary Structure GFIKKIALSFVAIFALISTAWADDFNIKYSSNYLMPAYVHFKNGGGQYSIQSKINVPLY CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEEECCCCEEEEEEECCCCEE NIVFSAKGTERNGQFNMLSYRDTRNGKTYALAEIDSSTVKYGKAKDPLKQEALTMPTFDL EEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCEECCCCCCCHHHHHHCCCCHHH FTTAFQLSYYDQLPTSFQTTNGKKLYPTPNVKLHKVQKAVTVKGQTYQEITYSFKTSDHK HHHHHHHHHHHHCCCCEECCCCCEECCCCCCEEEEEEEEEEECCCCHHHEEEEEECCCCE AITVKKYVGEKFPRYISYNRDGDNYELTFDSFVK EEEEHHHHCCCCCHHEEECCCCCCEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA