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The map label for this gene is ygfA [C]

Identifier: 126207597

GI number: 126207597

Start: 128145

End: 128720

Strand: Reverse

Name: ygfA [C]

Synonym: APL_0109

Alternate gene names: 126207597

Gene position: 128720-128145 (Counterclockwise)

Preceding gene: 126207598

Following gene: 126207596

Centisome position: 5.66

GC content: 40.45

Gene sequence:

>576_bases
ATGCAATCACATTCCGTACAAACTCGCAGACAACTTCGTCAATCCATTCTGAACGAACGAGCTAAATTAGCTTTAGAACA
ACAATCAATCGCTTCTTTTAATCTGATTCCGCAAGCACTTGCTCTTATCAATCAATATCACACCGAACATATTGCACTCT
ATTTGCCTTTTAATAGCGAAATTTCACCGCTTCCGTTGATTGAACGATTACAACAACAAAACAAATCGCTCTATCTGCCT
ATTCTCCATCCGTTTGCTAAAGGTCATCTGTTCTTTCAACAATATGATGCAGAAACGCTATTCATCACGCATAAATTCGG
TATGCAACAGCCTAAGCCGGACGTACGTAAGGTAAAACCGTTAAATGAAATCGAGATGATATTTACTCCGCTACTTGCTT
GTGATAAAAGCGGTAATCGTTTAGGTTACGGAGGCGGTTTTTATGACAGAACGCTTGCCCTAACTCCGCAAGCGATAAGC
GTAGGGCTTGCATATCCGTTTCAATTTGTTGAGAATTTACCGACGGAACCTTGGGATATACCGCTTAACCACTTGATCAT
AGGAGATATAAAGTGA

Upstream 100 bases:

>100_bases
AGCCTAAAGGCAATTAAGTTCGACTCCCTTGAACCTTCTGGTTCAAGGACCACCACAAGTAACGGCACTTCGGGTTCTTT
TGCATTAAGGTATTCTCAAT

Downstream 100 bases:

>100_bases
CAGACAAAGAATCCGCAGGAAGCCAAACATTAGTTCGAGGTCTTAAATTACTTGAATTGCTCTCCCAATACCCGAACGGT
TGTCCGTTAGCTCAACTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MQSHSVQTRRQLRQSILNERAKLALEQQSIASFNLIPQALALINQYHTEHIALYLPFNSEISPLPLIERLQQQNKSLYLP
ILHPFAKGHLFFQQYDAETLFITHKFGMQQPKPDVRKVKPLNEIEMIFTPLLACDKSGNRLGYGGGFYDRTLALTPQAIS
VGLAYPFQFVENLPTEPWDIPLNHLIIGDIK

Sequences:

>Translated_191_residues
MQSHSVQTRRQLRQSILNERAKLALEQQSIASFNLIPQALALINQYHTEHIALYLPFNSEISPLPLIERLQQQNKSLYLP
ILHPFAKGHLFFQQYDAETLFITHKFGMQQPKPDVRKVKPLNEIEMIFTPLLACDKSGNRLGYGGGFYDRTLALTPQAIS
VGLAYPFQFVENLPTEPWDIPLNHLIIGDIK
>Mature_191_residues
MQSHSVQTRRQLRQSILNERAKLALEQQSIASFNLIPQALALINQYHTEHIALYLPFNSEISPLPLIERLQQQNKSLYLP
ILHPFAKGHLFFQQYDAETLFITHKFGMQQPKPDVRKVKPLNEIEMIFTPLLACDKSGNRLGYGGGFYDRTLALTPQAIS
VGLAYPFQFVENLPTEPWDIPLNHLIIGDIK

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=179, Percent_Identity=39.1061452513966, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21877; Mature: 21877

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSHSVQTRRQLRQSILNERAKLALEQQSIASFNLIPQALALINQYHTEHIALYLPFNSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
ISPLPLIERLQQQNKSLYLPILHPFAKGHLFFQQYDAETLFITHKFGMQQPKPDVRKVKP
CCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHCCC
LNEIEMIFTPLLACDKSGNRLGYGGGFYDRTLALTPQAISVGLAYPFQFVENLPTEPWDI
CHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCC
PLNHLIIGDIK
CCCEEEEECCC
>Mature Secondary Structure
MQSHSVQTRRQLRQSILNERAKLALEQQSIASFNLIPQALALINQYHTEHIALYLPFNSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
ISPLPLIERLQQQNKSLYLPILHPFAKGHLFFQQYDAETLFITHKFGMQQPKPDVRKVKP
CCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHCCC
LNEIEMIFTPLLACDKSGNRLGYGGGFYDRTLALTPQAISVGLAYPFQFVENLPTEPWDI
CHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCC
PLNHLIIGDIK
CCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]