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The map label for this gene is xerC [C]

Identifier: 126175754

GI number: 126175754

Start: 4182585

End: 4183520

Strand: Direct

Name: xerC [C]

Synonym: Sbal_3558

Alternate gene names: 126175754

Gene position: 4182585-4183520 (Clockwise)

Preceding gene: 126175753

Following gene: 126175755

Centisome position: 81.57

GC content: 49.36

Gene sequence:

>936_bases
ATGACTACAGCGACCCCTTATGCGCTGTATTTGAGCCGCCTGTCTATTAATAGCCAGCGCTCTATCAGCTCACAAATGCG
CAGTATTGCGCGACTCATGCAGTGGCAAGAAGACTGTCTCGATGACAAGCTGTGTCAGATTGACTATCAACAAGCACTGC
AAATACGCGCTGTGATGACACATGCGCAGTGGTCAGCACGTTCCATCAACCGTGCCATGATAGCAATTAAGAATATCGTC
AAAGTAGCGGCTTTGATGAACAAAGCCGATTTATCGCAGGTCGCAAACTTGCAGACCATTAATCAAGTAAAGCACGGCGA
GCATCAAGGTACGCCGTTAAGCACCGAGCAAGTGACCGCGGTATTGGATTACCTTCGTGCGCAAAAAGGCACCTTTGCTA
CCCGTAATCTGGTGATATTCAGTCTGTTCTTGGGCACTGGGTTGCGCCGTAGTGAGTTATCGGCGTTGATGCTGAGTGAC
TACGATGCCAACTTGCATACCCTGACAGTGGCTGCGGGTAAAGGTAACAAGAGTCGCACCTTGTTCTTGCCTGAGTGGGT
AGAGCAAAATCTGCTGGCATGGCTTAAGTTACGTCAGCGCCAGCAGGGTTATTTAGTGTGCAAATCGACGCTAACTGGCA
AGCTTAAACTTACCGAGCCAACCAGCCCCACGGCTTTATATCGGTTAGTTAAAGATACCTTGTATGAGCTAGGGGTAGAT
AACGTATCACCCCATGATTTACGCCGCACCTTTATAACTCGCTTGCTTGAACAAAACGTGGATATCAATACCGTGCGCCA
AATGGCAGGACACGCCGATATCAGTACCACCACCATTTACGATAAACGTGACCATGCGTTTATGAAGCAAGCCGCTGCGA
TGCTGGATTACATCCCGCCTGATAAACCCATTAAACGGGGGCGCGGCAGTCGATGA

Upstream 100 bases:

>100_bases
GCTCAAAAGTGATACTATGAACGTGTTTCTAGTATCACTTTTCCCTTCTCGTTCAACCCTCTAAACACAATTCAACTTAA
TACACTTACTGGAGTTCTCT

Downstream 100 bases:

>100_bases
TAAACGTCAAACCCATCGCTAAACACACTAAGCATTGTTACTACCTTGCAACTCAAATCGCCGAAGACTTATTACTGTCA
GCCGTCGATTATGGCTTTGA

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTTATPYALYLSRLSINSQRSISSQMRSIARLMQWQEDCLDDKLCQIDYQQALQIRAVMTHAQWSARSINRAMIAIKNIV
KVAALMNKADLSQVANLQTINQVKHGEHQGTPLSTEQVTAVLDYLRAQKGTFATRNLVIFSLFLGTGLRRSELSALMLSD
YDANLHTLTVAAGKGNKSRTLFLPEWVEQNLLAWLKLRQRQQGYLVCKSTLTGKLKLTEPTSPTALYRLVKDTLYELGVD
NVSPHDLRRTFITRLLEQNVDINTVRQMAGHADISTTTIYDKRDHAFMKQAAAMLDYIPPDKPIKRGRGSR

Sequences:

>Translated_311_residues
MTTATPYALYLSRLSINSQRSISSQMRSIARLMQWQEDCLDDKLCQIDYQQALQIRAVMTHAQWSARSINRAMIAIKNIV
KVAALMNKADLSQVANLQTINQVKHGEHQGTPLSTEQVTAVLDYLRAQKGTFATRNLVIFSLFLGTGLRRSELSALMLSD
YDANLHTLTVAAGKGNKSRTLFLPEWVEQNLLAWLKLRQRQQGYLVCKSTLTGKLKLTEPTSPTALYRLVKDTLYELGVD
NVSPHDLRRTFITRLLEQNVDINTVRQMAGHADISTTTIYDKRDHAFMKQAAAMLDYIPPDKPIKRGRGSR
>Mature_310_residues
TTATPYALYLSRLSINSQRSISSQMRSIARLMQWQEDCLDDKLCQIDYQQALQIRAVMTHAQWSARSINRAMIAIKNIVK
VAALMNKADLSQVANLQTINQVKHGEHQGTPLSTEQVTAVLDYLRAQKGTFATRNLVIFSLFLGTGLRRSELSALMLSDY
DANLHTLTVAAGKGNKSRTLFLPEWVEQNLLAWLKLRQRQQGYLVCKSTLTGKLKLTEPTSPTALYRLVKDTLYELGVDN
VSPHDLRRTFITRLLEQNVDINTVRQMAGHADISTTTIYDKRDHAFMKQAAAMLDYIPPDKPIKRGRGSR

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=182, Percent_Identity=30.2197802197802, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1789261, Length=155, Percent_Identity=32.9032258064516, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 35151; Mature: 35020

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTATPYALYLSRLSINSQRSISSQMRSIARLMQWQEDCLDDKLCQIDYQQALQIRAVMT
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
HAQWSARSINRAMIAIKNIVKVAALMNKADLSQVANLQTINQVKHGEHQGTPLSTEQVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VLDYLRAQKGTFATRNLVIFSLFLGTGLRRSELSALMLSDYDANLHTLTVAAGKGNKSRT
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEE
LFLPEWVEQNLLAWLKLRQRQQGYLVCKSTLTGKLKLTEPTSPTALYRLVKDTLYELGVD
EECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC
NVSPHDLRRTFITRLLEQNVDINTVRQMAGHADISTTTIYDKRDHAFMKQAAAMLDYIPP
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCC
DKPIKRGRGSR
CCHHCCCCCCC
>Mature Secondary Structure 
TTATPYALYLSRLSINSQRSISSQMRSIARLMQWQEDCLDDKLCQIDYQQALQIRAVMT
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
HAQWSARSINRAMIAIKNIVKVAALMNKADLSQVANLQTINQVKHGEHQGTPLSTEQVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VLDYLRAQKGTFATRNLVIFSLFLGTGLRRSELSALMLSDYDANLHTLTVAAGKGNKSRT
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEE
LFLPEWVEQNLLAWLKLRQRQQGYLVCKSTLTGKLKLTEPTSPTALYRLVKDTLYELGVD
EECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC
NVSPHDLRRTFITRLLEQNVDINTVRQMAGHADISTTTIYDKRDHAFMKQAAAMLDYIPP
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCC
DKPIKRGRGSR
CCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA