| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yheT [H]
Identifier: 126175681
GI number: 126175681
Start: 4085053
End: 4086096
Strand: Direct
Name: yheT [H]
Synonym: Sbal_3484
Alternate gene names: 126175681
Gene position: 4085053-4086096 (Clockwise)
Preceding gene: 126175678
Following gene: 126175682
Centisome position: 79.67
GC content: 48.75
Gene sequence:
>1044_bases ATGCCAAATTCCTTTATGCCGCCTTGGTGGGCCAAGAGTCCCCATGTACAAACGATTTTACCCGTATTCACTAAAGTGGC CAAACCAGCATTACAGCGGCAGCGCTTAGAGTTGCCCGATGGCGATTTTGTCGATTTAGATTGGCAGGATTTTCCGCAGT CTGGCAAACCGATTGTGGTGATCATCCACGGGTTAGAAGGGAGTGCCCAGTCCCATTATGCGCGGCGGATACTGCAAGCC TGTAAAGAACAGCAAATCGCAGCCGTAGTGCACCATCACAGAAGTTGCTCGGGTGAGGCCAATCGCCTCGCGCGCAGTTA TCACAGTGGTGACACGGACGATTTACAGTTTAGTCTATCGACACTGAAAAGCGCGTATCCGCAATCGCCCTTATTAGCCG TAGGTTACAGTTTAGGCGGCAATGTGCTGACTAAGTATCAGGGCGAATATCAGGATGACAGTTTATTAGCCCGCGCTGTG GTTGTTTCGGCACCACTGCAATTGTCCGCCTGCGCAAAACGTTTAGAAAATGGTTTTTCGAAGGTATATCAAAGCTATTT AATCAAACAGTTACAGCAAAAAATCAGCCATAAGCTGAACGATCCGGACCTAGCCATCTCTATGCCGCTGAGCCAGTTGC AGGTCGACCGTTTAAATACCTTCTATGATTTTGACGATAAAGTCACAGCGCCATTGCACGGCTTTGACGGCGTAGACGAT TACTATACGCGTGCCAGTGGTTTACCCTTTGTCAGCCGCATTACTAAACCGACGCTTATCATCCATGCCAAGGACGATCC CTTTATGACCGATGAAGTGATCCCCCAACAAAACCAATTATCGGGTTATGTAGAATACGAACTGCATCCCTATGGCGGTC ATGTTGGCTTTATCGAAGGCGGTACACCTTGGAAACCGCGCTTCTATCTTGAGCGACGGATTTTACACTTTTTACTCGGC GATCAAAGTGTTGACCCGCTTAGCGCAGACCTCATCAACGGCGACAATATTCTCCAAGGAAGCACCGATGCTCATTCCCT ATGA
Upstream 100 bases:
>100_bases GCGACCTCAAAATAAGAATTTCAGCATTTTGAAGTCGCTTGGATATAAATTAAACACACGTTTTAATTTTCAGCAATAGC CGATACCAAGATAAACACCC
Downstream 100 bases:
>100_bases AACCCTATTACAACTCCCGAAGGAAACGCTCGCCAATTTGATCCGCGAATATCTCTTCGGTCAAGTGGAGGATGGCAGCT TTGCCAGTCTCGATGAACAG
Product: alpha/beta hydrolase fold domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MPNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVVIIHGLEGSAQSHYARRILQA CKEQQIAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLSTLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAV VVSAPLQLSACAKRLENGFSKVYQSYLIKQLQQKISHKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDD YYTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQQNQLSGYVEYELHPYGGHVGFIEGGTPWKPRFYLERRILHFLLG DQSVDPLSADLINGDNILQGSTDAHSL
Sequences:
>Translated_347_residues MPNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVVIIHGLEGSAQSHYARRILQA CKEQQIAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLSTLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAV VVSAPLQLSACAKRLENGFSKVYQSYLIKQLQQKISHKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDD YYTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQQNQLSGYVEYELHPYGGHVGFIEGGTPWKPRFYLERRILHFLLG DQSVDPLSADLINGDNILQGSTDAHSL >Mature_346_residues PNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVVIIHGLEGSAQSHYARRILQAC KEQQIAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLSTLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAVV VSAPLQLSACAKRLENGFSKVYQSYLIKQLQQKISHKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDDY YTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQQNQLSGYVEYELHPYGGHVGFIEGGTPWKPRFYLERRILHFLLGD QSVDPLSADLINGDNILQGSTDAHSL
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=328, Percent_Identity=28.0487804878049, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI194578891, Length=330, Percent_Identity=30.3030303030303, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI23397659, Length=342, Percent_Identity=25.1461988304094, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI23397661, Length=342, Percent_Identity=25.1461988304094, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI269315865, Length=340, Percent_Identity=26.1764705882353, Blast_Score=79, Evalue=9e-15, Organism=Escherichia coli, GI1789752, Length=317, Percent_Identity=45.1104100946372, Blast_Score=263, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17566110, Length=311, Percent_Identity=26.3665594855305, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71985405, Length=307, Percent_Identity=26.3843648208469, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71985413, Length=197, Percent_Identity=24.3654822335025, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323866, Length=288, Percent_Identity=26.0416666666667, Blast_Score=112, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6325162, Length=269, Percent_Identity=27.5092936802974, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6319655, Length=297, Percent_Identity=26.5993265993266, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI24652003, Length=326, Percent_Identity=26.9938650306748, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI281398151, Length=326, Percent_Identity=26.9938650306748, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24581365, Length=334, Percent_Identity=27.5449101796407, Blast_Score=102, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 38828; Mature: 38697
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS01133 UPF0017
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCEEE IIHGLEGSAQSHYARRILQACKEQQIAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH TLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAVVVSAPLQLSACAKRLENGFS HHHHHCCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH KVYQSYLIKQLQQKISHKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDD HHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH YYTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQQNQLSGYVEYELHPYGGHVGFIEG HHHHHCCCCHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEEEECC GTPWKPRFYLERRILHFLLGDQSVDPLSADLINGDNILQGSTDAHSL CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEECCCCCCCCC >Mature Secondary Structure PNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCEEE IIHGLEGSAQSHYARRILQACKEQQIAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH TLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAVVVSAPLQLSACAKRLENGFS HHHHHCCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH KVYQSYLIKQLQQKISHKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDD HHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH YYTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQQNQLSGYVEYELHPYGGHVGFIEG HHHHHCCCCHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEEEECC GTPWKPRFYLERRILHFLLGDQSVDPLSADLINGDNILQGSTDAHSL CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]