| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175661
Identifier: 126175661
GI number: 126175661
Start: 4063462
End: 4063980
Strand: Direct
Name: 126175661
Synonym: Sbal_3464
Alternate gene names: NA
Gene position: 4063462-4063980 (Clockwise)
Preceding gene: 126175657
Following gene: 126175663
Centisome position: 79.25
GC content: 47.98
Gene sequence:
>519_bases ATGCCAAATAAAAATGCCGGTTTTACCCTGATTGAACTCGTTGTGGTCATTATTATTCTAGGAGTATTAGCTGTAGTTGC TGCGCCTAAATTCATTAATATACAATCAGATGCCTATAAGAGTCAGCTTTCAGGTGCACAGGCTTCGATGAAATCCGCCG TCACCCTATTCAAAGCTAAGTCGGAAATTGCTAACAGCGGCACCACCAATCGAGTCGTTTACGACGGGATCCGTGGCGAA AACTACCAACCTTGGGCTGCCAGTGCCAGCGGTACAGCACCAAGCGCCGCTTATACTACGCCGCCAGAGATATTTAAGGC TGCTGGGCTCAATGTCGATGAATGGTCCTATCGAATCCATACTACTGGCGGTACCTACCAAGTCATTGCCACACCGAAGC AAAAACTGAATCTTGACACGCCGACTCAAGCGCAAGTCGAAGCGACAAATTGCTATATAGACTACAAGTGGGAGACGACG GGAATCCCCACCTATAACAAGGTCGACACAGGTTGCTAG
Upstream 100 bases:
>100_bases AGATAAACAAATCCCTGAGTTAACGGAACTTTCCCTAGCACTAGCCTGTTTGGGGAAACTTAGGTAGCATGAACCTCTTT GTATTAATTATCCTCTACCT
Downstream 100 bases:
>100_bases AACGACCTTAAAGCTGAAATATAATAGAAAAACAGCGAGCTAACCTGAGGTTATCTCGCTGTTTTTGTTAGCGCCACATT TTACAATCAAACGTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAKSEIANSGTTNRVVYDGIRGE NYQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIHTTGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETT GIPTYNKVDTGC
Sequences:
>Translated_172_residues MPNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAKSEIANSGTTNRVVYDGIRGE NYQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIHTTGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETT GIPTYNKVDTGC >Mature_171_residues PNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAKSEIANSGTTNRVVYDGIRGEN YQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIHTTGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETTG IPTYNKVDTGC
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18486; Mature: 18355
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAK CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHH SEIANSGTTNRVVYDGIRGENYQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIH HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE TTGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETTGIPTYNKVDTGC ECCCEEEEEECCHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure PNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHH SEIANSGTTNRVVYDGIRGENYQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIH HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE TTGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETTGIPTYNKVDTGC ECCCEEEEEECCHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA