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The map label for this gene is yjfJ [H]

Identifier: 126175647

GI number: 126175647

Start: 4046151

End: 4046840

Strand: Direct

Name: yjfJ [H]

Synonym: Sbal_3450

Alternate gene names: 126175647

Gene position: 4046151-4046840 (Clockwise)

Preceding gene: 126175646

Following gene: 126175648

Centisome position: 78.91

GC content: 47.25

Gene sequence:

>690_bases
ATGGGCATTCTGAATAAAATTTTAACAGCGTTTCGTGGTGGTGCTACCGAAGTGGGTCAAGGCATCGTTGACGCAAACTC
AACCCGTATTTTCGAACAGGAAATCCGTGACGCAGAAAAGCATTTAACCAATGCTAAACGTGAACTGACCGATGTCATGG
CGAAAGAAATGCAAGCCAGCCGTGAAATCGACCGCCTGAAACGTTCGATTGCCGAACACGAAGGTTATGCGACTCAAGCG
TTGGACAAAGGTAATGAAGCCTTAGCAATTGAAATTGCAGAGAAGATTGCCGAGTTAGATCAAGAGCTGTCTGAGCAACA
AAGCGCCAACGATAGCTTTAGCGCCCATGCTGCACGTTTGAAAGACTTAGTGAAGAAAACCGAGCGCCAACTGTCTGATT
ATCAACGTCAGCTGAGCATGGTTAAAACCACTGAAAGCGTGCAAAAAGCCACGGCAACCATTACTGATTCGTTCGCGTCT
AGCAACTCTAAGCTGCTGAACGCTAAAGATTCACTCGAGCGCATCAAGGCACGTCAGCAGCAGTTTGACGACCGCCTGAA
AGCGGCAGAAACCTTAGCCGATGAAAACAGTGACAAGTCACTGCAATCTAAGCTAGCCGAAGCCGGTATTGGTGAGCAAA
AGTCGAATGCAAATGCTGTGCTAGACCGAATCAAAGCACGTAAAAGCTAA

Upstream 100 bases:

>100_bases
CTAGCATGCTCGAAATCGAGCAAGAATTATCAGTTTTATCCGATAACTGTTTAGAAGTTATCGATGAAATGGTCGATTAT
CTGAAATAAGGAGCCACAAA

Downstream 100 bases:

>100_bases
GCAATGATTGACCGAATGCCGAGTCTCAGTGGGATCATCACCCCCTACTGACCTCGGCATTTTTTTGTTTCATCCGCATA
AAATAATTGACCACTATTGC

Product: phage shock protein A, PspA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGILNKILTAFRGGATEVGQGIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQASREIDRLKRSIAEHEGYATQA
LDKGNEALAIEIAEKIAELDQELSEQQSANDSFSAHAARLKDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFAS
SNSKLLNAKDSLERIKARQQQFDDRLKAAETLADENSDKSLQSKLAEAGIGEQKSNANAVLDRIKARKS

Sequences:

>Translated_229_residues
MGILNKILTAFRGGATEVGQGIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQASREIDRLKRSIAEHEGYATQA
LDKGNEALAIEIAEKIAELDQELSEQQSANDSFSAHAARLKDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFAS
SNSKLLNAKDSLERIKARQQQFDDRLKAAETLADENSDKSLQSKLAEAGIGEQKSNANAVLDRIKARKS
>Mature_228_residues
GILNKILTAFRGGATEVGQGIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQASREIDRLKRSIAEHEGYATQAL
DKGNEALAIEIAEKIAELDQELSEQQSANDSFSAHAARLKDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFASS
NSKLLNAKDSLERIKARQQQFDDRLKAAETLADENSDKSLQSKLAEAGIGEQKSNANAVLDRIKARKS

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI1790625, Length=227, Percent_Identity=30.8370044052863, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 25352; Mature: 25220

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILNKILTAFRGGATEVGQGIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQAS
CCHHHHHHHHHCCCHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REIDRLKRSIAEHEGYATQALDKGNEALAIEIAEKIAELDQELSEQQSANDSFSAHAARL
HHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFASSNSKLLNAKDSLERIKARQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QFDDRLKAAETLADENSDKSLQSKLAEAGIGEQKSNANAVLDRIKARKS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GILNKILTAFRGGATEVGQGIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQAS
CHHHHHHHHHCCCHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REIDRLKRSIAEHEGYATQALDKGNEALAIEIAEKIAELDQELSEQQSANDSFSAHAARL
HHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFASSNSKLLNAKDSLERIKARQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QFDDRLKAAETLADENSDKSLQSKLAEAGIGEQKSNANAVLDRIKARKS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]