| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is artJ [H]
Identifier: 126175589
GI number: 126175589
Start: 3972553
End: 3973287
Strand: Direct
Name: artJ [H]
Synonym: Sbal_3392
Alternate gene names: 126175589
Gene position: 3972553-3973287 (Clockwise)
Preceding gene: 126175587
Following gene: 126175590
Centisome position: 77.48
GC content: 44.08
Gene sequence:
>735_bases ATGAAAAAATCCATGTTATTAGGCGGCCTGACCTTAACTGCCACCTTGTTGTTAGCTGGATGCGGAAAAAGCGATGACGT ATTAGTCGTTGGCACCAATGCCGCCTTCCCTCCTTTTGAATATGTTGGCGGCCAAAGTGGTGATGAAATCAAAGGCTTTG ATATCGATCTGGCCAAGCAAATCGCTAAAGATGCCGGCAAGACGCTCAAAGTCGAAAACATGAAATTCGATTCACTGATC GTCGCACTCAACTCAGGCAAGATTGATTTTATCGCCTCAGGCATGACGATTACCGCTGAACGTCAGGCAAACGTAAACTT CTCAGAGCCTTACTACGAAGCGACCCAAGTGGTACTGGTTAACAAAGATAACGATAGCATTCATACGCTTGAAGATATTA AAGGCAAACACTTTGCGGTGCAGTTAGGCACAACCGCTGACATCATGTCGAAAAAATACACCCAAAATATCACCGCCTTT AATACGGGTTTCGAAGCCATTATGGAGCTTAAAAATTCAAAGGTAGATTTAGTGTTATTCGACAGCGAACCTGCCGCTAA TTATCTGGCTAAAAATCCTGAATTAAAGATGATCAAACTGGATTTCCCTGCTGAGTTTTATGGCTTCGCCGTGTCAAAAG AGCAGCCTGAACTGTTGGCGAGCATCAATAAAACACTGGCTAACATGAAAGCCGACGGCCAATATCAGACGCTCGTTTCT GCCCATATAAAGTGA
Upstream 100 bases:
>100_bases AAATGAATTTTTAATCAAATTAACAGCATAATTATTGACACAACATGCTCATCTGCCTATAGTCGCCACACTGATAGTGA AATCGACAAGAGAGTCTTAA
Downstream 100 bases:
>100_bases TATCAGCATGATAGACGCAATTAACAGCTCGCTGTTCAGCCCAATTGGCGAAGACGGCATGATAGGTATACTGCTGATAT TAAATGGTTTGAAGGTGACG
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKKSMLLGGLTLTATLLLAGCGKSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGKTLKVENMKFDSLI VALNSGKIDFIASGMTITAERQANVNFSEPYYEATQVVLVNKDNDSIHTLEDIKGKHFAVQLGTTADIMSKKYTQNITAF NTGFEAIMELKNSKVDLVLFDSEPAANYLAKNPELKMIKLDFPAEFYGFAVSKEQPELLASINKTLANMKADGQYQTLVS AHIK
Sequences:
>Translated_244_residues MKKSMLLGGLTLTATLLLAGCGKSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGKTLKVENMKFDSLI VALNSGKIDFIASGMTITAERQANVNFSEPYYEATQVVLVNKDNDSIHTLEDIKGKHFAVQLGTTADIMSKKYTQNITAF NTGFEAIMELKNSKVDLVLFDSEPAANYLAKNPELKMIKLDFPAEFYGFAVSKEQPELLASINKTLANMKADGQYQTLVS AHIK >Mature_244_residues MKKSMLLGGLTLTATLLLAGCGKSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGKTLKVENMKFDSLI VALNSGKIDFIASGMTITAERQANVNFSEPYYEATQVVLVNKDNDSIHTLEDIKGKHFAVQLGTTADIMSKKYTQNITAF NTGFEAIMELKNSKVDLVLFDSEPAANYLAKNPELKMIKLDFPAEFYGFAVSKEQPELLASINKTLANMKADGQYQTLVS AHIK
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=219, Percent_Identity=37.8995433789954, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787088, Length=248, Percent_Identity=30.6451612903226, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1787031, Length=220, Percent_Identity=33.1818181818182, Blast_Score=111, Evalue=3e-26, Organism=Escherichia coli, GI1788228, Length=220, Percent_Identity=29.5454545454545, Blast_Score=103, Evalue=7e-24, Organism=Escherichia coli, GI1788648, Length=227, Percent_Identity=29.9559471365639, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1788649, Length=255, Percent_Identity=26.2745098039216, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26547; Mature: 26547
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSMLLGGLTLTATLLLAGCGKSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQ CCCCEEECCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCHHHHHH IAKDAGKTLKVENMKFDSLIVALNSGKIDFIASGMTITAERQANVNFSEPYYEATQVVLV HHHHCCCEEEEECEEECEEEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEE NKDNDSIHTLEDIKGKHFAVQLGTTADIMSKKYTQNITAFNTGFEAIMELKNSKVDLVLF ECCCCCEEEHHHCCCCEEEEEECCHHHHHHHHHHCCCEEECHHHHHHHHHCCCCEEEEEE DSEPAANYLAKNPELKMIKLDFPAEFYGFAVSKEQPELLASINKTLANMKADGQYQTLVS CCCCCHHHHHCCCCEEEEEEECCHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEE AHIK ECCC >Mature Secondary Structure MKKSMLLGGLTLTATLLLAGCGKSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQ CCCCEEECCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCHHHHHH IAKDAGKTLKVENMKFDSLIVALNSGKIDFIASGMTITAERQANVNFSEPYYEATQVVLV HHHHCCCEEEEECEEECEEEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEE NKDNDSIHTLEDIKGKHFAVQLGTTADIMSKKYTQNITAFNTGFEAIMELKNSKVDLVLF ECCCCCEEEHHHCCCCEEEEEECCHHHHHHHHHHCCCEEECHHHHHHHHHCCCCEEEEEE DSEPAANYLAKNPELKMIKLDFPAEFYGFAVSKEQPELLASINKTLANMKADGQYQTLVS CCCCCHHHHHCCCCEEEEEEECCHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEE AHIK ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]